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Peer-reviewed publications at MBG - 2025

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Peer-reviewed publications at MBG - all years

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Luu, T. B., Carles, N., Bouzou, L., Gibelin-Viala, C., Remblière, C., Gasciolli, V., Bono, J. J., Lefebvre, B., Pauly, N. & Cullimore, J. (2023). Analysis of the structure and function of the LYK cluster of Medicago truncatula A17 and R108. Plant Science, 332, Article 111696. https://doi.org/10.1016/j.plantsci.2023.111696
Borg, K. N., Cheng, G., Shetty, A., Wang, T., Tesauro, C., Knudsen, B. R. & Ho, Y.-P. (2023). An Integrated Platform for the Assessment of Fluorescent Signals in Hydrogel Beads Produced by Droplet Microfluidics. In Proceedings 2023 IEEE 23rd International Conference on Nanotechnology (NANO) (pp. 180-184). IEEE. https://doi.org/10.1109/NANO58406.2023.10231287
Omelková, M., Fenger, C. D., Murray, M., Hammer, T. B., Pravata, V. M., Bartual, S. G., Czajewski, I., Bayat, A., Ferenbach, A. T., Stavridis, M. P. & van Aalten, D. M. F. (2023). An O-GlcNAc transferase pathogenic variant linked to intellectual disability affects pluripotent stem cell self-renewal. DMM Disease Models and Mechanisms, 16(6), Article dmm049132. https://doi.org/10.1242/dmm.049132
Yuan, C., Tang, L., Lopdell, T., Petrov, V. A., Oget-Ebrad, C., Moreira, G. C. M., Duarte, J. L. G., Sartelet, A., Cheng, Z., Salavati, M., Wathes, D. C., Crowe, M. A., GplusE Consortium, Coppieters, W., Littlejohn, M., Charlier, C., Druet, T., Georges, M. & Takeda, H. (2023). An organism-wide ATAC-seq peak catalog for the bovine and its use to identify regulatory variants. Genome Research, 33(10), 1848-1864. https://doi.org/10.1101/gr.277947.123
Ng, K. W., Boumelha, J., Enfield, K. S. S., Almagro, J., Cha, H., Pich, O., Karasaki, T., Moore, D. A., Salgado, R., Sivakumar, M., Young, G., Molina-Arcas, M., de Carné Trécesson, S., Anastasiou, P., Fendler, A., Au, L., Shepherd, S. T. C., Martínez-Ruiz, C., Puttick, C. ... CAPTURE Consortium (2023). Antibodies against endogenous retroviruses promote lung cancer immunotherapy. Nature, 616(7957), 563-573. https://doi.org/10.1038/s41586-023-05771-9
Zuzic, L., Marzinek, J., Anand, G., Warwicker, J. & Bond, P. J. (2023). A pH-dependent cluster of charges in a conserved cryptic pocket on flaviviral envelopes. eLife, 12, Article e82447. https://doi.org/10.7554/eLife.82447
Manjunath, L., Oh, S., Ortega, P., Bouin, A., Bournique, E., Sanchez, A., Martensen, P. M., Auerbach, A. A., Becker, J. T., Seldin, M., Harris, R. S., Semler, B. L. & Buisson, R. (2023). APOBEC3B drives PKR-mediated translation shutdown and protects stress granules in response to viral infection. Nature Communications, 14(1), Article 820. https://doi.org/10.1038/s41467-023-36445-9
Lopes-Rodrigues, V., Boxy, P., Sim, E., Park, D. I., Habeck, M., Carbonell, J., Andersson, A., Fernández-Suárez, D., Nissen, P., Nykjær, A. & Kisiswa, L. (2023). AraC interacts with p75NTR transmembrane domain to induce cell death of mature neurons. Cell Death and Disease, 14(7), Article 440. https://doi.org/10.1038/s41419-023-05979-7
Montiel, J., García-Soto, I., James, E. K., Reid, D., Cárdenas, L., Napsucialy-Mendivil, S., Ferguson, S., Dubrovsky, J. G. & Stougaard, J. (2023). Aromatic amino acid biosynthesis impacts root hair development and symbiotic associations in Lotus japonicus. Plant Physiology, 193(2), 1508-1526. https://doi.org/10.1093/plphys/kiad398
Mohammad-Beigi, H., Wijaya, W., Madsen, M., Hayashi, Y., Li, R., Maria Rovers, T. A., Jæger, T. C., Buell, A. K., Hougaard, A. B., Kirkensgaard, J. J. K., Westh, P., Ipsen, R. & Svensson, B. (2023). Association of caseins with β-lactoglobulin influenced by temperature and calcium ions: A multi-parameter analysis. Food Hydrocolloids, 137, Article 108373. https://doi.org/10.1016/j.foodhyd.2022.108373
Książek, M., Goulas, T., Mizgalska, D., Rodríguez-Banqueri, A., Eckhard, U., Veillard, F., Waligórska, I., Benedyk-Machaczka, M., Sochaj-Gregorczyk, A. M., Madej, M., Thøgersen, I. B., Enghild, J. J., Cuppari, A., Arolas, J. L., de Diego, I., López-Pelegrín, M., Garcia-Ferrer, I., Guevara, T., Dive, V. ... Gomis-Rüth, F. X. (2023). A unique network of attack, defence and competence on the outer membrane of the periodontitis pathogen Tannerella forsythia. Chemical Science, 14(4), 869-888. https://doi.org/10.1039/d2sc04166a
Catapano, C., Rahm, J. V., Omer, M., Teodori, L., Kjems, J., Dietz, M. S. & Heilemann, M. (2023). Biased activation of the receptor tyrosine kinase HER2. Cellular and Molecular Life Sciences, 80(6), Article 158. https://doi.org/10.1007/s00018-023-04806-8
Fernandez-Cantos, M. V., Garcia-Morena, D., Yi, Y., Liang, L., Gómez-Vázquez, E. & Kuipers, O. P. (2023). Bioinformatic mining for RiPP biosynthetic gene clusters in Bacteroidales reveals possible new subfamily architectures and novel natural products. Frontiers in Microbiology, 14, 1219272. Article 1219272. https://doi.org/10.3389/fmicb.2023.1219272
Al-Sawaf, O., Weiss, J., Skrzypski, M., Lam, J. M., Karasaki, T., Zambrana, F., Kidd, A. C., Frankell, A. M., Watkins, T. B. K., Martínez-Ruiz, C., Puttick, C., Black, J. R. M., Huebner, A., Bakir, M. A., Collins, S., Veeriah, S., Magno, N., Naceur-Lombardelli, C., Prymas, P. ... TRACERx Consortium (2023). Body composition and lung cancer-associated cachexia in TRACERx. Nature Medicine, 29(4), 846-858. https://doi.org/10.1038/s41591-023-02232-8
Lundby, J. M. B., Holste, S. & Pedersen, L. (2023). Brain Calcifications and Psychiatric Disorders. Abstract from 20th Annual Vienna BioCenter PhD Program Symposium, Vienna, Austria.
Taleski, M., Chapman, K., Novák, O., Schmülling, T., Frank, M. & Djordjevic, M. A. (2023). CEP peptide and cytokinin pathways converge on CEPD glutaredoxins to inhibit root growth. Nature Communications, 14(1), Article 1683. https://doi.org/10.1038/s41467-023-37282-6
Berntsson, E., Vosough, F., Noormägi, A., Padari, K., Asplund, F., Gielnik, M., Paul, S., Jarvet, J., Tõugu, V., Roos, P. M., Kozak, M., Gräslund, A., Barth, A., Pooga, M., Palumaa, P. & Wärmländer, S. K. T. S. (2023). Characterization of Uranyl (UO22+) Ion Binding to Amyloid Beta (Aβ) Peptides: Effects on Aβ Structure and Aggregation. ACS Chemical Neuroscience, 14(15), 2618-2633. https://doi.org/10.1021/acschemneuro.3c00130
Tolomeo, D., Traversa, D., Venuto, S., Ebbesen, K., Garcia Rodriguez, J. L., Tamma, G., Ranieri, M., Simonetti, G., Ghetti, M., Paganelli, M., Visci, G., Liso, A., Kok, K., Muscarella, L. A., Fabrizio, F. P., Frassanito, M. A., Lamanuzzi, A., Saltarella, I., Solimando, A. G. ... Storlazzi, C. T. (2023). circPVT1 and PVT1/AKT3 show a role in cell proliferation, apoptosis, and tumor subtype-definition in Small Cell Lung Cancer. Genes, Chromosomes & Cancer, 62(7), 377-391. https://doi.org/10.1002/gcc.23121
Martin, M., Nilsson, S. C., Eikrem, D., Fromell, K., Scavenius, C., Vogt, L. M., Bielecka, E., Potempa, J., Enghild, J. J., Nilsson, B., Ekdahl, K. N., Kapetanovic, M. C. & Blom, A. M. (2023). Citrullination of C1-inhibitor as a mechanism of impaired complement regulation in rheumatoid arthritis. Frontiers in Immunology, 14, Article 1203506. https://doi.org/10.3389/fimmu.2023.1203506
Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L. ... Wu, D. D. (2023). Comparative genomics reveals the hybrid origin of a macaque group. Science Advances, 9(22), Article eadd3580. https://doi.org/10.1126/sciadv.add3580
Zhang, Y., Plesner, T. J., Ouyang, Y., Zheng, Y.-C., Bouhier, E., Ingemann Berentzen, E., Zhang, M., Zhou, P., Zimmermann , W., Andersen, G. R. & Guo, Z. (2023). Computer-aided discovery of a novel thermophilic laccase for low-density polyethylene degradation. Journal of Hazardous Materials, 458, Article 131986. https://doi.org/10.1016/j.jhazmat.2023.131986
Afonine, P. V., Gobet, A., Moissonnier, L., Martin, J., Poon, B. K. & Chaptal, V. (2023). Conformational space exploration of cryo-EM structures by variability refinement. Biochimica et biophysica acta - Biomembranes, 1865(4), 184133. Article 184133. https://doi.org/10.1016/j.bbamem.2023.184133
Sigurdsson, A. I., Louloudis, I., Banasik, K., Westergaard, D., Winther, O., Lund, O., Ostrowski, S. R., Erikstrup, C., Pedersen, O. B. V., Nyegaard, M., Brunak, S., Vilhjálmsson, B. J., Rasmussen, S. & DBDS Genomic Consortium (2023). Deep integrative models for large-scale human genomics. Nucleic Acids Research, 51(12), E67. Article e67. https://doi.org/10.1093/nar/gkad373
Lázaro-Gorines, R., Pérez, P., Heras-Murillo, I., Adán-Barrientos, I., Albericio, G., Astorgano, D., Flores, S., Luczkowiak, J., Labiod, N., Harwood, S. L., Segura-Tudela, A., Rubio-Pérez, L., Nugraha, Y., Shang, X., Li, Y., Alfonso, C., Adipietro, K. A., Abeyawardhane, D. L., Navarro, R. ... Álvarez-Vallina, L. (2023). Dendritic Cell-Mediated Cross-Priming by a Bispecific Neutralizing Antibody Boosts Cytotoxic T Cell Responses and Protects Mice against SARS-CoV-2. Advanced Science, 10(34), Article 2304818. https://doi.org/10.1002/advs.202304818
Zhang, C., Reid, K., Sands, A. F., Fraimout, A., Schierup, M. H. & Merilä, J. (2023). De Novo Mutation Rates in Sticklebacks. Molecular Biology and Evolution, 40(9), Article msad192. https://doi.org/10.1093/molbev/msad192
Als, T. D., Kurki, M. I., Grove, J., Voloudakis, G., Therrien, K., Tasanko, E., Nielsen, T. T., Naamanka, J., Veerapen, K., Levey, D. F., Bendl, J., Bybjerg-Grauholm, J., Zeng, B., Demontis, D., Rosengren, A., Athanasiadis, G., Bækved-Hansen, M., Qvist, P., Bragi Walters, G. ... Børglum, A. D. (2023). Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses. Nature Medicine, 29(7), 1832-1844. https://doi.org/10.1038/s41591-023-02352-1
Olesen, H. G., Michailidou, I., Zelek, W. M., Vreijling, J., Ruizendaal, P., de Klein, F., Marquart, J. A., Kuipers, T. B., Mei, H., Zhang, Y., Ahasan, M., Johnson, K. K., Wang, Y., Morgan, B. P., van Dijk, M., Fluiter, K., Andersen, G. R. & Baas, F. (2023). Development, Characterization, and in vivo Validation of a Humanized C6 Monoclonal Antibody that Inhibits the Membrane Attack Complex. Journal of Innate Immunity, 15(1), 16-36. https://doi.org/10.1159/000524587