2007

Publications 2007

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Zhou, Z., Hamming, O. J., Ank, N., Paludan, S. R., Nielsen, A. L., Hartmann, R. & Nielsen, A. L. (2007). Type III interferon (IFN) induces a type I IFN-like response in a restricted subset of cells through signaling pathways involving both the Jak-STAT pathway and the mitogen-activated protein kinases. Journal of Virology, 81(14), 7749-7758. https://doi.org/10.1128/JVI.02438-06

Zhao, G., Yuan, C., Wind, T., Andreasen, P., Huang, Z. & Huang, M. (2007). New pharmacophore for serine protease inhibition revealed by crystal structure of human urokinase-type plasminogen activator complexed with a cyclic peptidyl inhibitor, upain-1. J. Struct. Biol., 160.

Zhang, L., Hellgren, L. & Xu, X. (2007). Immobilization of phospholipase C for the production of ceramide from sphingomyelin hydrolysis. Journal of the American Oil Chemists' Society, 84, 237-247.

Zhang, D. H., Guo, Z. & Sun, Y. (2007). Characterization of lipase in reversed micelles formulated by Cibacron Blue F-3GA modified Span 85. Biotechnology Progress, 23(1), 108-115. https://doi.org/10.1021/bp060188b

Yatime, L., Mechulam, Y., Blanquet, S. & Schmitt, E. (2007). Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states. Proceedings of the National Academy of Sciences of the United States of America, 104(47), 18445-50. https://doi.org/10.1073/pnas.0706784104

Xu, S. L., Dong., M., Liu, X., Howard, K. A. & Besenbacher, F. (2007). Direct Force Measurements of between siRNA and Chitosan Molecules. Bionanotechnology.

Xu, S., Dong, M., Liu, X., Howard, K. A., Kjems, J. & Besenbacher, F. (2007). Direct force measurements between siRNA and chitosan molecules using force spectroscopy. Biophysical Journal, 93(3), 952-9. https://doi.org/10.1529/biophysj.106.093229

Wæhrens, L. N., Rasmussen, J. T., Heegaard, C. W. & Falborg, L. (2007). Preparation and in vitro evaluation of 99mTc-labelled bovine lactadherin as a novel radioligand for apoptosis detection. Journal of Labelled Compounds and Radiopharmaceuticals, 50, 211.

Wygrecka, M., Markart, P., Morty, R. E., Kanse, S. M., Andreasen, P., Wind, T. ... Preissner, K. T. (2007). Plasminogen activator inhibitor-1 is a major physiological inhibitor of factor VII-activating protease. Journal of Biological Chemistry.

Wuerges, J., Geremia, S., Fedosov, S. & Randaccio, L. (2007). Vitamin B₁₂ transport proteins: Crystallographic analysis of β-axial ligand substitutions in cobalamin bound to transcobalamin. IUBMB Life, 59(11), 722-729.

Weyer, K., Boldt, H. B., Poulsen, C. B., Kjaer-Sorensen, K., Gyrup, C. & Oxvig, C. (2007). A substrate specificity-determining unit of three Lin12-Notch repeat modules is formed in trans within the pappalysin-1 dimer and requires a sequence stretch C-terminal to the third module. Journal of Biological Chemistry, 282(15), 10988-99. https://doi.org/10.1074/jbc.M607903200

Vikbjerg, A. F., Andersen, T. L., Jørgensen, K., Mu, H. & Xu, X. (2007). Oxidative stability of DHA-containing liposomes during cold storage. Journal of the American Oil Chemists' Society, 84(7), 631-637.

Vikbjerg, A. F., Mu, H. & Xu, X. (2007). Synthesis of structured phospholipids by immobilized phospholipase A2 catalyzed acidolysis. Journal of Biotechnology, 128, 545-554.

Valásek, L., Szamecz, B., Hinnebusch, A. G. & Nielsen, K. H. (2007). In vivo stabilization of preinitiation complexes by formaldehyde cross-linking. Methods in Enzymology, 429, 163-83. https://doi.org/10.1016/S0076-6879(07)29008-1

Valnickova, Z., Petersen, S. V., Nielsen, SB., Otzen, D. & Enghild, J. J. (2007). Heparin binding induces a conformational change of pigment epithelium-derived factor (PEDF). Journal of Biological Chemistry.

Valnickova, Z., Thøgersen, I., Potempa, J. & Enghild, J. J. (2007). Thrombin-activable fibrinolysis inhibitor (TAFI) zymogen is an active carboxypeptidase. Journal of Biological Chemistry, 282(2), 1072-9.

Valnickova, Z., Thøgersen, I., Potempa, J. & Enghild, J. J. (2007). The intrinsic enzymatic activity of procarboxypeptidase U (TAFI) does not significantly influence the fibrinolytic rate: reply to a rebuttal. J Thromb Haemost. 2007.

Tolstrup, M., Selzer-Plön, J., Laursen, A. L., Bertelsen, L., Gerstoft, J., Duch, M. R. ... Østergaard, L. (2007). Full fusion competence rescue of the enfuvirtide resistant HIV-1 gp41 genotype (43D) by a prevalent polymorphism (137K). AIDS, 21(4), 519-21.

Tirichine, L., Sandal, N. N., Madsen, L. H., Radutoiu, E. S., Albrektsen, A. S., Sato, S. ... Stougaard, J. (2007). A gain-of-function mutation in a cytokinine receptor triggers spontaneous root nodule organogenesis. Science, 315, 104-107.

Timm-Heinrich, M., Xu, X., Nielsen, N. S. & Jacobsen, C. (2007). Application of antioxidants during short-path distillation of structured lipids. Journal of Food Lipids, 14(3), 244-262.

Thorburn, M. S., Vistisen, B., Thorp, R. M., Rockell, M. J., Jeukendrup, A. E., Xu, X. & Rowlands, D. S. (2007). No attenuation of gastric distress or benefit to performance with adaptation to octanoate-rich esterified oils in female cyclists. European Journal of Sport Science, 7(4), 179-192.

Thaysen-Andersen M, M., Thøgersen, I., Lademann, U., Offenberg, H., Giessing, AM., Enghild, J. J. ... Højrup P., P. (2007). Investigating the biomarker potential of glycoproteins using comparative glycoprofiling - application to tissue inhibitor of metalloproteinases-1. Biochim. Biophys. Acta..

Thaysen-Andersen, M., Thøgersen, I., Nielsen, HJ., Lademann, U., Brunner, N., Enghild, J. J. & Højrup, P. (2007). Rapid and individual-specific glycoprofiling of a low- abundant N-glycosylated protein tissue inhibitor of metalloproteinases-1. Mol. Cell. Proteomics.

Taylor, D. J., Nilsson, J., A. Rod, M., Andersen, G. R., Nissen, P. & Frank, J. (2007). Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. E M B O Journal, 26(9), 2421-2431.

Sørensen, K. D., Kunder, S., Quintanilla-Martinez, L., Jonna, S., Jörg, S. & Pedersen, F. S. (2007). Enhancer mutations of Akv murine leukemia virus inhibit the induction of mature B-cell lymphomas and shift disease specificity towards the more differentiated plasma cell stage. Virology, 362(1), 179-91. https://doi.org/10.1016/j.virol.2006.12.016

Sørensen, J. G., Nielsen, M. M. & Loeschcke, V. (2007). Gene expression profile analysis of Drosophila melanogaster selected for resistance to environmental stressors. European Society for Evolutionary Biology, 20, 1624-1636. https://doi.org/10.1111/j.1420-0101.2007.01326.x

Sørensen, A-D. M., Baron, C. P., Let, M. B., Brüggemann, D. A., Pedersen, L. R. L. & Jacobsen, C. (2007). Homogenization conditions affect the oxidative stability of fish oil enriched milk emulsions: oxidation linked to changes in protein composition at the oil-water interface. Journal of Agricultural and Food Chemistry, 55(5), 1781-9.

Sørensen, A. B., Lund, A. H., Kunder, S., Quintanilla-Martinez, L., Schmidt, J., Wang, B. ... Pedersen, F. S. (2007). Impairment of alternative splice sites defining a novel gammaretroviral exon within gag modifies the oncogenic properties of Akv murine leukemia virus. Retrovirology, 4, [46]. https://doi.org/10.1186/1742-4690-4-46

Søe, R., Mosley, R. T., Justice, M., Nielsen-Kahn, J., Shastry, M., Merrill, A. R. & Andersen, G. R. (2007). Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2. Journal of Biological Chemistry, 282, 657-666.

Skowronski, M., Lebeck, J., Rojek, A., Prætorius, J., Füchtbauer, E-M., Frøkiær, J. & Nielsen, S. (2007). AQP7 is localized in capillaries of adipose tissue, cardiac and striated muscle: implications in glycerol metabolism. American Journal of Physiology: Renal Physiology, 292(3), F956-65.

Skivesen, N., Têtu, A., Kristensen, M., Kjems, J., Frandsen, L. H. & Borel, P. I. (2007). Photonic-crystal waveguide biosensor. Optics Express, 15(6), 3169-3176.

Sinning, S., Boye, S. V., Wiborg, O., Ortega-Caballero, F., Jensen, HH. & Bols, M. (2007). High dopamine transporter selectively can be displayed by remarkably simple non-nitrogen containing inhibitors. Bioorg. Med. Chem. Lett., 17(21), 6019-6025.

Singh, R., Kølvraa, S. & Rattan, S. (2007). Genetics of longevity with emphasis on the relevance of HSP70 genes. Frontiers in Bioscience, 12, 4504-4513.

Sejersen, H. & Rattan, S. (2007). Glyoxal-induced premature senescence in human skin fibroblasts. New York Academy of Sciences. Annals, 1100, 518-523.

Schyth, B. D., Lorenzen, N. & Pedersen, F. S. (2007). A High Throughput In Vivo Model for Testing Delivery and Antiviral Effects of siRNAs in Vertebrates. Mol. Ther., 15, 1366-1372.

Rougemaille, M., Gudipati, R. K., Olesen, J. R., Thomsen, R., Seraphin, B., Libri, D. & Jensen, T. H. (2007). Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants: mRNA surveillance in THO/sub2 mutants. The EMBO Journal, 26(9), 2317-2326.

Rougemaille, M., Gudipati, R. K., Olesen, J. R., Thomsen, R., Seraphin, B., Libri, D. & Jensen, T. H. (2007). Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants. E M B O Journal, 26, 2317-2326. https://doi.org/10.1038/sj.emboj.7601669

Rattan, S. & Ali, R. (2007). Hormetic prevention of molecular damage during cellular aging of human skin fibroblasts and keratinocytes. New York Academy of Sciences. Annals, 1100, 424-430.

Rattan, S. (2007). The science of healthy aging: genes, milieu, and chance. New York Academy of Sciences. Annals, 1114, 1-10.

Rattan, S. (2007). Homeostasis, homeodynamics, and aging. I Encyclopedia of Gerontology (s. 696-699). Elsevier Inc., UK.

Rasmussen, L. C. V., Sperling-Petersen, H. U. & Mortensen, K. K. (2007). Hitting Bacteria at the Heart of the Central Dogma: Sequence-Specific Inhibition. Microbial Cell Factories, 6(24). https://doi.org/10.1186/1475-2859-6-24

Rasmussen, B. S., Pedersen, J. M., Sørensen, J., Egebjerg, J., Schiøtt, B., Mortensen, K. K. & Skrydstrup, T. (2007). Enantioselective Proteins: Selection, Binding Studies and Molecular Modeling of Antibodies with Affinity towards Hydrophobic BINOL Derivatives. ChemBioChem, 8(16), 1974-1980. https://doi.org/10.1002/cbic.200700295

Rasmussen, L. C. V., Jensen, J. M., Croitoru, V., Sperling-Petersen, H. U. & Mortensen, K. K. (2007). Production and epitope characterization of mAbs specific for translation factor IF1. Biochemical and Biophysical Research Communications, 364, 72-8. https://doi.org/10.1016/j.bbrc.2007.09.120

Radutoiu, S., Madsen, L. H., Madsen, E. B., Jurkiewicz, A., Fukai, E., Quistgaard, E. M. H. ... Stougaard, J. (2007). LysM domains mediate lipochitin-oligosaccharide recognition and Nfr genes extend the symbiotic host range. E M B O Journal, 26(17), 3923-35. https://doi.org/10.1038/sj.emboj.7601826

Porsgaard, T., Overgaard, J., Krogh, A. L., Jensen, M. B., Guo, Z. & Mu, H. (2007). Butter Blend Containing Fish Oil Improves the Level of n-3 Fatty Acids in Biological Tissues of Hamster. Journal of Agricultural and Food Chemistry, 55, 7615-7619. https://doi.org/10.1021/jf071389d

Picard, M., Jensen, A-M. L., Sørensen, T. L-M., Champeil, P., Møller, J. V. & Nissen, P. (2007). Ca(2+) versus Mg(2+) Coordination at the Nucleotide-binding site of the Sarcoplasmic Reticulum Ca(2+)-ATPase. Journal of Molecular Biology, 368(1), 1-7.

Petersen, S. V., Valnickova, Z., Oury, T. D., Crapo, J. D., Nielsen, N. C. & Enghild, J. J. (2007). The Subunit Composition of Human Extracellylar Superoxide Dismutate (EC-SOD) Regulate Enzymatic Activity. B M C Biochemistry, 8, 19.

Peiter, E., Sun, J., Heckmann, A. B. L., Venkateshwaran, M., Riely, B. K., Otegui, M. S. ... Ane, J-M. (2007). The Medicago truncatula DMI1 protein modulates cytosolic calcium signaling. Plant Physiology, 145(1), 192-203.

Pedersen, B. P., Buch-Pedersen, M. J., Morth, J. P., Palmgren, M. G. & Nissen, P. (2007). Crystal structure of the plasma membrane proton pump. Nature, 450(7172), 1111-1114. https://doi.org/10.1038/nature06417

Pedersen, H. B., Altevogt, S., Jordon-Thaden, B., Heber, O., Rappaport, M. L., Schwalm, D. ... Wolf, A. (2007). Crossed Beam Photodissociation Imaging of HeH⁺ with Vacuum Ultraviolet Free-Electron Laser Pulses. Physical Review Letters, 98.

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Revideret 30.01.2019