2016

Mun, T., Bachmann, A., Gupta, V., Stougaard, J. & Andersen, S. U. (2016). Lotus Base: An integrated information portal for the model legume Lotus japonicus. Scientific Reports, 6, [39447]. https://doi.org/10.1038/srep39447

Kromann-Hansen, T., Oldenburg, E., Yung, K. W. Y., Ghassabeh, G. H., Muyldermans, S., Declerck, P. J., Huang, M., Andreasen, P. A. & Ngo, J. C. K. (2016). A Camelid-derived Antibody Fragment Targeting the Active Site of a Serine Protease Balances between Inhibitor and Substrate Behavior. Journal of Biological Chemistry, 291, 15156-15168. https://doi.org/10.1074/jbc.M116.732503

Christensen, L. F. B., Malmos, K. G., Christiansen, G. & Otzen, D. E. (2016). A Complex Dance: The Importance of Glycosaminoglycans and Zinc in the Aggregation of Human Prolactin. Biochemistry, 55(26), 3674–3684. https://doi.org/10.1021/acs.biochem.6b00153

Malinauskaite, L., Said, S., Sahin, C., Grouleff, J., Shahsavar, A., Bjerregaard, H., Noer, P. R., Severinsen, K., Boesen, T., Schiøtt, B., Sinning, S. & Nissen, P. (2016). A Conserved Leucine Occupies the Empty Substrate Site of LeuT in the Na+-free Return State. Nature Communications, 7, [11673]. https://doi.org/10.1038/ncomms11673, https://doi.org/10.1038/ncomms11673

Molleston, J. M., Sabin, L. R., Moy, R. H., Menghani, S. V., Rausch, K., Gordesky-Gold, B., Hopkins, K. C., Zhou, R., Jensen, T. H., Wilusz, J. E. & Cherry, S. (2016). A conserved virus-induced cytoplasmic TRAMP-like complex recruits the exosome to target viral RNA for degradation. Genes & Development, 30(14), 1658-1670. https://doi.org/10.1101/gad.284604.116

Pertoldi, C., Faurby, S., Loeschcke, V., Thirstrup, J., Ruiz-Gonzalez, A., Kjærsgaard, A., Manenti, T. & Bahrndorff, S. (2016). A novel alternative to F-tests for ecological studies. Ecological Indicators, 67, 484-490. https://doi.org/10.1016/j.ecolind.2016.02.061

Bundgaard, L., Bendixen, E., Sørensen, M. A., Harman, V. M., Beynon, R. J., Petersen, L. J. & Jacobsen, S. (2016). A selected reaction monitoring-based analysis of acute phase proteins in interstitial fluids from experimental equine wounds healing by secondary intention. Wound Repair and Regeneration, 24(3), 525-532. https://doi.org/10.1111/wrr.12425

Gong, L., Proulle, V., Fang, C., Hong, Z., Lin, Z., Liu, M., Xue, G., Yuan, C., Lin, L., Furie, B., Flaumenhaft, R., Andreasen, P., Furie, B. & Huang, M. (2016). A specific plasminogen activator inhibitor-1 antagonist derived from inactivated urokinase. Journal of Cellular and Molecular Medicine (Online), 20(10), 1851-1860. https://doi.org/10.1111/jcmm.12875

Larsen, K. E., Kristensen, K. K., Momeni, J., Farajzadeh, L. & Bendixen, C. (2016). A-to-I RNA editing of the IGFBP7 transcript increases during aging in porcine brain tissues. Biochemical and Biophysical Research Communications, 479(3), 596-601. https://doi.org/10.1016/j.bbrc.2016.09.125

Kornerup, L. S., Juul, C. B., Fedosov, S., Heegaard, C. W., Greibe, E. & Nexø, E. (2016). Absorption and retention of free and milk protein-bound cyano- and hydroxocobalamins: An experimental study in rats. Biochimie, 126, 57-62. https://doi.org/10.1016/j.biochi.2015.11.024

Vogt, L. M., Talens, S., Scavenius, C., Enghild, J. J., Saxne, T. & Blom, A. M. (2016). Activation of complement by pigment epithelium derived protein in synovial fluid of rheumatoid arthritis patients. Immunobiology, 221(10), 1157-1157. https://doi.org/10.1016/j.imbio.2016.06.075

Luetyn, W., Antal, P., Braekman, B., Bundy, J., Cirulli, F., Fang-Yen, C., Fuellen, G., Leroi, A., Liu, Q., Martorell, P., Metspalu, A., Perola, M., Ristow, M., Saul, N., Schoofs, L., Siems, K., Temmerman, L., Smets, T., Wolk, A. & Rattan, S. (2016). Ageing with elegans: a research proposal to map healthspan pathways. Biogerontology, 17(4), 771-782. https://doi.org/10.1007/s10522-016-9644-x

Madsen, J. B., Andersen, L. M., Dupont, D. M., Trelle, M. B., Johansen, J. S., Jensen, J. K., Jørgensen, T. J. D. & Andreasen, P. A. (2016). An RNA Aptamer Inhibits a Mutation-Induced Inactivating Misfolding of a Serpin. Cell Chemical Biology, 23(6), 700–708. https://doi.org/10.1016/j.chembiol.2016.04.013

Quan, H., Fang, L., Pan, H., Deng, Z., Gao, S., Liu, O., Wang, Y., Hu, Y., Fang, X., Yao, Z., Guo, F., Lu, R., Xia, K. & Tang, Z. (2016). An adaptive immune response driven by mature, antigen-experienced T and B cells within the microenvironment of oral squamous cell carcinoma. International Journal of Cancer, 138(12), 2952-2962. https://doi.org/10.1002/ijc.30019

Nyegaard, S., Christensen, B. & Rasmussen, J. T. (2016). An optimized method for accurate quantification of cell migration using human small intestine cells. Metabolic Engineering Communications, 3, 76-83. https://doi.org/10.1016/j.meteno.2016.03.002

Reinert, T., Schøler, L. V., Thomsen, R., Tobiasen, H., Vang, S., Nordentoft, I. K., Lamy, P., Kannerup, A-S., Mortensen, F. V., Stribolt, K., Hamilton-Dutoit, S. J., Laurberg, S., Pallisgaard, N., Pedersen, J. S., Ørntoft, T. F. & Andersen, C. L. (2016). Analysis of circulating tumour DNA to monitor disease burden following colorectal cancer surgery. Gut, 65(4). https://doi.org/10.1136/gutjnl-2014-308859

Christensen, G. J. M., Scholz, C. F. P., Enghild, J., Rohde, H., Kilian, M., Thürmer, A., Brzuszkiewicz, E., Lomholt, H. B. & Brüggemann, H. (2016). Antagonism between Staphylococcus epidermidis and Propionibacterium acnes and its genomic basis. BMC Genomics, 17(1), 1-14. https://doi.org/10.1186/s12864-016-2489-5

Todt, D., François, C., Anggakusuma, U., Behrendt, P., Engelmann, M., Knegendorf, L., Vieyres, G., Wedemeyer, H., Hartmann, R., Pietschmann, T., Duverlie, G. & Steinmann, E. (2016). Antiviral Activities of Different Interferon Types and Subtypes against Hepatitis E Virus Replication. Antimicrobial Agents and Chemotherapy, 60(4), 2132-2139. https://doi.org/10.1128/AAC.02427-15

Hansen, T. B., Venø, M. T., Jensen, T. I., Schaefer, A., Damgaard, C. K. & Kjems, J. (2016). Argonaute-associated short introns are a novel class of gene regulators. Nature Communications, 7, [11538]. https://doi.org/10.1038/ncomms11538

Østergaard, S., Ettema, J. F., Hjortø, L., Pedersen, J., Lassen, J. & Kargo, M. (2016). Avoiding double counting when deriving economic values through stochastic dairy herd simulation. Livestock Science, 187, 114-124. https://doi.org/10.1016/j.livsci.2016.03.004

Jager, S. B. & Vaegter, C. B. (2016). Avoiding experimental bias by systematic antibody validation. Neural Regeneration Research, 11(7), 1079-80. https://doi.org/10.4103/1673-5374.187037

Marco-Ramell, A., Arroyo, L., Peña, R., Pato, R., Saco, Y., Fraile, L., Bendixen, E. & Bassols, A. (2016). Biochemical and proteomic analyses of the physiological response induced by individual housing in gilts provide new potential stress markers. BMC Veterinary Research, 12, [265]. https://doi.org/10.1186/s12917-016-0887-1

Nguyen, D. N., Jiang, P., Stensballe, A., Bendixen, E., Sangild, P. T. & Chatterton, D. E. W. (2016). Bovine lactoferrin regulates cell survival, apoptosis and inflammation in intestinal epithelial cells and preterm pig intestine. Journal of Proteomics, 139, 95-102. https://doi.org/10.1016/j.jprot.2016.03.020

Dupont, D. M., Bjerregaard, N., Verpaalen, B., Andreasen, P. A. & Jensen, J. K. (2016). Building a Molecular Trap for a Serine Protease from Aptamer and Peptide Modules. Bioconjugate Chemistry, 27(4), 918-926. https://doi.org/10.1021/acs.bioconjchem.6b00007

Kriegbaum, M. C., Jacobsen, B., Füchtbauer, A., Hansen, G. H., Christensen, I. J., Rundsten, C. F., Persson, M., Engelholm, L. H., Madsen, A. N., Di Meo, I., Lund, I. K., Holst, B., Kjaer, A., L'rum, O. D., Füchtbauer, E. M. & Ploug, M. (2016). C4.4A gene ablation is compatible with normal epidermal development and causes modest overt phenotypes. Scientific Reports, 6, [25833]. https://doi.org/10.1038/srep25833

Starnawska, A., Demontis, D., Pen, A., Hedemand, A., Nielsen, A. L., Staunstrup, N. H., Grove, J., Als, T. D., Jarram, A., O'Brien, N. L., Mors, O., McQuillin, A., Børglum, A. D. & Nyegaard, M. (2016). CACNA1C hypermethylation is associated with bipolar disorder. Translational Psychiatry, 6(6), e831. https://doi.org/10.1038/tp.2016.99

Reid, D. E., Heckmann, A. B., Novak, O., Kelly, S. & Stougaard, J. (2016). CYTOKININ OXIDASE/DEHYDROGENASE3 maintains cytokinin homeostasis during root and nodule development in Lotus japonicus. Plant Physiology, 170(2), 1060-1074. https://doi.org/10.1104/pp.15.00650

Koro, C., Hellvard, A., Delaleu, N., Binder, V., Scavenius, C., Bergum, B., Główczyk, I., Roberts, H. M., Chapple, I. L., Grant, M. M., Rapala-Kozik, M., Klaga, K., Enghild, J. J., Potempa, J. & Mydel, P. (2016). Carbamylated LL-37 as a modulator of the immune response. Innate Immunity, 22(3), 218-229. https://doi.org/10.1177/1753425916631404

Ferraris, P., Chandra, P. K., Panigrahi, R., Aboulnasr, F., Chava, S., Kurt, R., Pawlotsky, J-M., Wilkens, L., Osterlund, P., Hartmann, R., Balart, L. A., Wu, T. & Dash, S. (2016). Cellular Mechanism for Impaired Hepatitis C Virus Clearance by Interferon Associated with IFNL3 Gene Polymorphisms Relates to Intrahepatic Interferon-λ Expression. American Journal of Pathology, 186(4), 938-951. https://doi.org/10.1016/j.ajpath.2015.11.027

Jensen, N. F., Agama, K., Roy, A., Smith, D. H., Pfister, T. D., Rømer, M. U., Zhang, H-L., Doroshow, J. H., Knudsen, B. R., Stenvang, J., Brünner, N. & Pommier, Y. (2016). Characterization of DNA topoisomerase I in three SN-38 resistant human colon cancer cell lines reveals a new pair of resistance-associated mutations. Journal of Experimental and Clinical Cancer Research (Online), 35(1), [56]. https://doi.org/10.1186/s13046-016-0335-x

Vu Quang, H., Vinding, M. S., Xia, D., Nielsen, T., Ullisch, M. G., Dong, M., Nielsen, N. C. & Kjems, J. (2016). Chitosan-coated Poly(lactic-co-glycolic acid) Perfluorooctyl Bromide Nanoparticles for Cell Labeling in 19F Magnetic Resonance Imaging. Carbohydrate Polymers, 136, 936-944. https://doi.org/10.1016/j.carbpol.2015.09.076

Ebbesen, K. K., Kjems, J. & Hansen, T. B. (2016). Circular RNAs: Identification, biogenesis and function. BBA General Subjects, 1859(1), 163-168. https://doi.org/10.1016/j.bbagrm.2015.07.007

Wang, H., Pan, M., Ni, J., Zhang, Y., Zhang, Y., Gao, S., Liu, J., Wang, Z., Zhang, R., He, H., Wu, B. & Duan, X. (2016). ClC-7 Deficiency Impairs Tooth Development and Eruption. Scientific Reports, 6, [19971]. https://doi.org/10.1038/srep19971

Holm, T. H., Isaksen, T. J., Pedersen, S. G., Heuck, A., Bøttger, P., Füchtbauer, E-M., Nedergaard, S. T., Nyengaard, J. R., Andreasen, M., Nissen, P. & Lykke-Hartmann, K. (2016). Cognitive deficits caused by a disease-mutation in the α3 Na(+)/K(+)-ATPase isoform. Scientific Reports, 6(31972). https://doi.org/10.1038/srep31972

Bechsgaard, J. S., Vanthournout, B., Funch, P., Vestbo, S., Gibbs, R. A., Richards, S., Sanggaard, K. W., Enghild, J. J. & Bilde, T. (2016). Comparative genomic study of arachnid immune systems indicates loss of beta-1,3-glucanase-related proteins and the immune deficiency pathway. Journal of Evolutionary Biology, 29(2), 277-291. https://doi.org/10.1111/jeb.12780