Peer-reviewed articles

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Peer-reviewed publications at MBG

Elfarrash, S., Jensen, N. M., Ferreira, N., Schmidt, S. I., Gregersen, E., Vestergaard, M. V., Nabavi, S., Meyer, M. & Jensen, P. H. (2021). Polo-like kinase 2 inhibition reduces serine-129 phosphorylation of physiological nuclear alpha-synuclein but not of the aggregated alpha-synuclein. PLOS ONE, 16(10), [e0252635]. https://doi.org/10.1371/journal.pone.0252635

Habeck, M. & Poulsen, H. (2021). What FXYDs fix. The Journal of general physiology, 153(6). https://doi.org/10.1085/jgp.202012845

Rattan, S. & Kaur, G. (2021). Nutrition, food and diet: recapitulation, conclusions and suggestions. In S. Rattan & G. Kaur (Eds.), Nutrition, food and diet in ageing and longevity (pp. 633-640). Springer. Healthy Ageing and Longevity Vol. 14 https://doi.org/10.1007/978-3-030-83017-5_30

Rattan, S. (2021). Nutritional hormetins in ageing and longevity. In S. Rattan & G. Kaur (Eds.), Nutrition, Food and Diet in Ageing and Longevity (pp. 109-122). Springer. Healthy Ageing and Longevity Vol. 14 https://doi.org/10.1007/978-3-030-83017-5_6

Bhattacharya, K. & Rattan, S. (2021). Fats and oils for health and longevity. In S. Rattan & G. Kaur (Eds.), Nutrition, food and diet in ageing and longevity. (pp. 53-62). Springer. Healthy Ageing and Longevity Vol. 14 https://doi.org/10.1007/978-3-030-83017-5_3

Shemesh, M., Aktepe, T. E., Deerain, J. M., McAuley, J. L., Audsley, M. D., David, C. T., Purcell, D. F. J., Urin, V., Hartmann, R., Moseley, G. W., Mackenzie, J. M., Schreiber, G. & Harari, D. (2021). SARS-CoV-2 suppresses IFNβ production mediated by NSP1, 5, 6, 15, ORF6 and ORF7b but does not suppress the effects of added interferon. PLOS Pathogens, 17(8), [e1009800]. https://doi.org/10.1371/journal.ppat.1009800

Turtola, M., Manav, C. M., Kumar, A., Tudek, A., Mroczek, S., Krawczyk, P. S., Dziembowski, A., Schmid, M., Passmore, L. A., Casanal, A. & Jensen, T. H. (2021). Three-layered control of mRNA poly(A) tail synthesis in Saccharomyces cerevisiae. Genes and Development, 35(17-18), 1290-1303. https://doi.org/10.1101/GAD.348634.121

Vogt, S., Bobbili, M. R., Stadlmayr, G., Stadlbauer, K., Kjems, J., Rüker, F., Grillari, J. & Wozniak-Knopp, G. (2021). An engineered CD81-based combinatorial library for selecting recombinant binders to cell surface proteins: Laminin binding CD81 enhances cellular uptake of extracellular vesicles. Journal of Extracellular Vesicles, 10(11), [e12139]. https://doi.org/10.1002/jev2.12139

Yan, Y., Gu, T., Christensen, S. D. K., Su, J., Lassen, T. R., Hjortbak, M. V., Lo, I., Venø, S. T., Tóth, A. E., Song, P., Nielsen, M. S., Bøtker, H. E., Blagoev, B., Drasbek, K. R. & Kjems, J. (2021). Cyclic hypoxia conditioning alters the content of myoblast-derived extracellular vesicles and enhances their cell-protective functions. Biomedicines, 9(9), [1211]. https://doi.org/10.3390/biomedicines9091211

Lenoir, G., D’Ambrosio, J. M., Dieudonné, T. & Čopič, A. (2021). Transport Pathways That Contribute to the Cellular Distribution of Phosphatidylserine. Frontiers in Cell and Developmental Biology, 9, [737907]. https://doi.org/10.3389/fcell.2021.737907

Hjortebjerg, R., Bojsen-Møller, K. N., Søeby, M., Oxvig, C., Madsbad, S. & Frystyk, J. (2021). Metabolic improvement after gastric bypass correlates with changes in IGF-regulatory proteins stanniocalcin-2 and IGFBP-4. Metabolism: Clinical and Experimental, 124, [154886]. https://doi.org/10.1016/j.metabol.2021.154886

Grenov, A. C., Moss, L., Edelheit, S., Cordiner, R., Schmiedel, D., Biram, A., Hanna, J. H., Jensen, T. H., Schwartz, S. & Shulman, Z. (2021). The germinal center reaction depends on RNA methylation and divergent functions of specific methyl readers. The Journal of Experimental Medicine, 218(10), [e20210360]. https://doi.org/10.1084/jem.20210360

Wippel, K., Tao, K., Niu, Y., Zgadzaj, R., Kiel, N., Guan, R., Dahms, E., Zhang, P., Jensen, D. B., Logemann, E., Radutoiu, S., Schulze-Lefert, P. & Garrido-Oter, R. (2021). Host preference and invasiveness of commensal bacteria in the Lotus and Arabidopsis root microbiota. Nature Microbiology, 6(9), 1150-1162. https://doi.org/10.1038/s41564-021-00941-9

Martín-Encinas, E., Rubiales, G., Knudsen, B. R., Palacios, F. & Alonso, C. (2021). Fused chromeno and quinolino[1,8]naphthyridines: Synthesis and biological evaluation as topoisomerase I inhibitors and antiproliferative agents. Bioorganic and Medicinal Chemistry, 40, [116177]. https://doi.org/10.1016/j.bmc.2021.116177

Serpell, L. C., Radford, S. E. & Otzen, D. (2021). AlphaFold: A Special Issue and a Special time for Protein Science. Journal of Molecular Biology, 433(20), [167231]. https://doi.org/10.1016/j.jmb.2021.167231

Holleufer, A., Winther, K. G., Gad, H. H., Ai, X., Chen, Y., Li, L., Wei, Z., Deng, H., Liu, J., Frederiksen, N. A., Simonsen, B., Andersen, L. L., Kleigrewe, K., Dalskov, L., Pichlmair, A., Cai, H., Imler, J. L. & Hartmann, R. (2021). Two cGAS-like receptors induce antiviral immunity in Drosophila. Nature, 597, 114-118. https://doi.org/10.1038/s41586-021-03800-z

Li, R. Q., Jiang, M., Huang, J. Z., Møller, I. M. & Shu, Q. Y. (2021). Mutations of the Genomes Uncoupled 4 Gene Cause ROS Accumulation and Repress Expression of Peroxidase Genes in Rice. Frontiers in Plant Science, 12, [682453]. https://doi.org/10.3389/fpls.2021.682453

Petersen, K. V., Selas, A., Hymøller, K. M., Mizielinski, K., Thorsager, M., Stougaard, M., Alonso, C., Palacios, F., Pérez-Pertejo, Y., Reguera, R. M., Balaña-Fouce, R., Knudsen, B. R. & Tesauro, C. (2021). Simple and fast DNA based sensor system for screening of small-molecule compounds targeting eukaryotic topoisomerase 1. Pharmaceutics, 13(8), [1255]. https://doi.org/10.3390/pharmaceutics13081255

Krönauer, C. & Lahaye, T. (2021). The flavin monooxygenase Bs3 triggers cell death in plants, impairs growth in yeast and produces H₂O₂ in vitro. PLOS ONE, 16(8 August), [e0256217]. https://doi.org/10.1371/journal.pone.0256217

Silberberg, J. M., Corey, R. A., Hielkema, L., Stock, C., Stansfeld, P. J., Paulino, C. & Hänelt, I. (2021). Deciphering ion transport and ATPase coupling in the intersubunit tunnel of KdpFABC. Nature Communications, 12(1), [5098]. https://doi.org/10.1038/s41467-021-25242-x

Selas, A., Fuertes, M., Melcón-Fernández, E., Pérez-Pertejo, Y., Reguera, R. M., Balaña-Fouce, R., Knudsen, B. R., Palacios, F. & Alonso, C. (2021). Hybrid quinolinyl phosphonates as heterocyclic carboxylate isosteres: Synthesis and biological evaluation against topoisomerase 1B (TOP1B). Pharmaceuticals, 14(8), [784]. https://doi.org/10.3390/ph14080784

Vittozzi, Y., Nadzieja, M., Rogato, A., Radutoiu, S., Valkov, V. T. & Chiurazzi, M. (2021). The Lotus japonicus NPF3.1 Is a Nodule-Induced Gene That Plays a Positive Role in Nodule Functioning. Frontiers in Plant Science, 12, [688187]. https://doi.org/10.3389/fpls.2021.688187

Bayraktar, G., Højgaard, K., Nijssen, L. & Takeuchi, T. (2021). A within-subject experimental design using an object location task in rats. Journal of Visualized Experiments, 2021(171), [e62458]. https://doi.org/10.3791/62458

Tudek, A., Krawczyk, P. S., Mroczek, S., Tomecki, R., Turtola, M., Matylla-Kulińska, K., Jensen, T. H. & Dziembowski, A. (2021). Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae. Nature Communications, 12, [4951]. https://doi.org/10.1038/s41467-021-25251-w

Rogato, A., Valkov, V. T., Nadzieja, M., Stougaard, J. & Chiurazzi, M. (2021). The lotus japonicus AFB6 gene is involved in the auxin dependent root developmental program. International Journal of Molecular Sciences, 22(16), [8495]. https://doi.org/10.3390/ijms22168495

Sekmen Cetinel, A. H., Yalcinkaya, T., Akyol, T. Y., Gokce, A. & Turkan, I. (2021). Pretreatment of seeds with hydrogen peroxide improves deep-sowing tolerance of wheat seedlings. Plant Physiology and Biochemistry, 167, 321-336. https://doi.org/10.1016/j.plaphy.2021.08.016

Taschner, M., Basquin, J., Steigenberger, B., Schäfer, I. B., Soh, Y. M., Basquin, C., Lorentzen, E., Räschle, M., Scheltema, R. A. & Gruber, S. (2021). Nse5/6 inhibits the Smc5/6 ATPase and modulates DNA substrate binding. EMBO Journal, 40(15), [e107807]. https://doi.org/10.15252/embj.2021107807

Rahimi, K., Venø, M. T., Dupont, D. M. & Kjems, J. (2021). Nanopore sequencing of brain-derived full-length circRNAs reveals circRNA-specific exon usage, intron retention and microexons. Nature Communications, 12, [4825]. https://doi.org/10.1038/s41467-021-24975-z

Otzen, D. E., Pedersen, J. N., Somavarapu, A. K., Clement, A., Ji, M., Petersen, E. H., Pedersen, J. S., Urban, S. & Schafer, N. P. (2021). Cys-labelling kinetics of membrane protein GlpG: a role for specific SDS binding and micelle changes? Biophysical Journal, 120(18), 4115-4128. https://doi.org/10.1016/j.bpj.2021.08.001

Thorup, C., Petro, C., Bøggild, A., Ebsen, T. S., Brokjær, S., Nielsen, L. P., Schramm, A. & Bjerg, J. J. (2021). How to grow your cable bacteria: Establishment of a stable single-strain culture in sediment and proposal of Candidatus Electronema aureum GS. Systematic and Applied Microbiology, 44(5), [126236]. https://doi.org/10.1016/j.syapm.2021.126236

Reginald, S. S., Etzerodt, M., Fapyane, D. & Chang, I. S. (2021). Functional Expression of a Mo-Cu-Dependent Carbon Monoxide Dehydrogenase (CODH) and Its Use as a Dissolved CO Bio-microsensor. ACS Sensors, 6(7), 2772–2782. https://doi.org/10.1021/acssensors.1c01243

Sweet, M. E., Larsen, C., Zhang, X., Schlame, M., Pedersen, B. P. & Stokes, D. L. (2021). Structural basis for potassium transport in prokaryotes by KdpFABC. Proceedings of the National Academy of Sciences of the United States of America, 118(29), [e2105195118]. https://doi.org/10.1073/pnas.2105195118

Dubey, V., Stokes, D. L., Pedersen, B. P. & Khandelia, H. (2021). An Intracellular Pathway Controlled by the N-terminus of the Pump Subunit Inhibits the Bacterial KdpFABC Ion Pump in High K⁺ Conditions. Journal of Molecular Biology, 433(15), [167008]. https://doi.org/10.1016/j.jmb.2021.167008

Hansen, S. B., Dyla, M., Neumann, C., Quistgaard, E. M. H., Andersen, J. L., Kjaergaard, M. & Nissen, P. (2021). The Crystal Structure of the Ca²⁺-ATPase 1 from Listeria monocytogenes reveals a Pump Primed for Dephosphorylation. Journal of Molecular Biology, 433(16), [167015]. https://doi.org/10.1016/j.jmb.2021.167015

Timcenko, M., Dieudonné, T., Montigny, C., Boesen, T., Lyons, J. A., Lenoir, G. & Nissen, P. (2021). Structural Basis of Substrate-Independent Phosphorylation in a P4-ATPase Lipid Flippase. Journal of Molecular Biology, 433(16), [167062]. https://doi.org/10.1016/j.jmb.2021.167062

Zarei, M., Rahimi, K., Hassanzadeh, K., Abdi, M., Hosseini, V., Fathi, A. & Kakaei, K. (2021). From the environment to the cells: An overview on pivotal factors which affect spreading and infection in COVID-19 pandemic. Environmental Research, 201, [111555]. https://doi.org/10.1016/j.envres.2021.111555

Larsen, K. (2021). The porcine cerebellin gene family. Gene, 799, [145852]. https://doi.org/10.1016/j.gene.2021.145852

de Melo Costa, V. R., Pfeuffer, J., Louloupi, A., Ørom, U. A. V. & Piro, R. M. (2021). SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency. BMC Bioinformatics, 22(1), [368]. https://doi.org/10.1186/s12859-021-04282-6

Bryzgunova, O., Konoshenko, M., Zaporozhchenko, I., Yakovlev, A. & Laktionov, P. (2021). Isolation of cell-free mirna from biological fluids: Influencing factors and methods. Diagnostics, 11(5), [865]. https://doi.org/10.3390/diagnostics11050865

Schnepf, D., Crotta, S., Thamamongood, T., Stanifer, M., Polcik, L., Ohnemus, A., Vier, J., Jakob, C., Llorian, M., Gad, H. H., Hartmann, R., Strobl, B., Kirschnek, S., Boulant, S., Schwemmle, M., Wack, A. & Staeheli, P. (2021). Selective Janus kinase inhibition preserves interferon-λ-mediated antiviral responses. Science Immunology, 6(59), [eabd5318]. https://doi.org/10.1126/sciimmunol.abd5318

Wang, X., Hao, D. & Kadarmideen, H. N. (2021). GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis. Journal of Computational Biology, 28(3), 304-316. https://doi.org/10.1089/cmb.2020.0081

Frank, M., Kaulfürst-Soboll, H., Fischer, K. & von Schaewen, A. (2021). Complex-Type N-Glycans Influence the Root Hair Landscape of Arabidopsis Seedlings by Altering the Auxin Output. Frontiers in Plant Science, 12, [635714]. https://doi.org/10.3389/fpls.2021.635714

Zhang, B. B. B., Kan, R. L. D., Woo, T. F., Chan, C. C. H., Fong, K. N. K. & Kranz, G. S. (2021). Probing the effects of single-session iTBS on associative memory: A prospective, randomized, controlled cross-over study. Brain Stimulation, 14(4), 924-926. https://doi.org/10.1016/j.brs.2021.05.017

de Toda, I. M., Rattan, S., De la Feunte, M. & Arranz, L. (2021). Female mice reaching exceptionally high old age have preserved 20S proteasome activities. Antioxidants, 10(9), [1397]. https://doi.org/10.3390/antiox10091397

Bøjer Rasmussen, C., Enghild, J. J. & Scavenius, C. (2021). Identification of polyphenol oxidases in potato tuber (Solanum tuberosum) and purification and characterization of the major polyphenol oxidases. Food Chemistry, 365, [130454]. https://doi.org/10.1016/j.foodchem.2021.130454

Møller, P. L., Rohde, P. D., Winther, S., Breining, P., Nissen, L., Nykjær, A., Böttcher, M., Nyegaard, M. & Kjolby, M. (2021). Sortilin as a Biomarker for Cardiovascular Disease Revisited. Frontiers in cardiovascular medicine, 8, [652584]. https://doi.org/10.3389/fcvm.2021.652584

Gomes-Duarte, A., Bauer, S., Venø, M. T., Norwood, B. A., Henshall, D. C., Kjems, J., Rosenow, F., Vangoor, V. R. & Pasterkamp, R. J. (2021). Enrichment of Circular RNA Expression Deregulation at the Transition to Recurrent Spontaneous Seizures in Experimental Temporal Lobe Epilepsy. Frontiers in Genetics, 12, [627907]. https://doi.org/10.3389/fgene.2021.627907

Quistgaard, E. M. (2021). Erratum to ‘BAP31: Physiological functions and roles in disease’. [BIOCHIMIE 186C (2021) 105–129](S030090842100105X)(10.1016/j.biochi.2021.04.008). Biochimie, 189, 168. https://doi.org/10.1016/j.biochi.2021.06.014

Christensen, S. B., Simonsen, H. T., Engedal, N., Nissen, P., Møller, J. V., Denmeade, S. R. & Isaacs, J. T. (2021). From Plant to Patient: Thapsigargin, a Tool for Understanding Natural Product Chemistry, Total Syntheses, Biosynthesis, Taxonomy, ATPases, Cell Death, and Drug Development. In A. D. Kinghorn, H. Falk, S. Gibbons, Y. Asakawa, J. K. Liu & V. M. Dirsch (Eds.), Progress in the Chemistry of Organic Natural Products (Vol. 115, pp. 59-114). Springer. https://doi.org/10.1007/978-3-030-64853-4_2

Christensen, M., Petersen, J. L., Sivanandam, P., Kronborg, C. S., Knudsen, U. B. & Martensen, P. M. (2021). Reduction of serum-induced endothelial STAT3(Y705) activation is associated with preeclampsia. Pregnancy Hypertension, 25, 103-109. https://doi.org/10.1016/j.preghy.2021.05.012

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