Verzelli, P., Nold, A.
, Sun, C., Heilemann, M., Schuman, E. M. & Tchumatchenko, T. (2022).
Unbiased choice of global clustering parameters for single-molecule localization microscopy.
Scientific Reports,
12(1), 22561.
https://doi.org/10.1038/s41598-022-27074-1
Teodori, L., Omer, M., Märcher, A., Skaanning, M. K., Andersen, V. L., Nielsen, J. S., Oldenburg, E., Lin, Y., Gothelf, K. V. & Kjems, J. (2022).
Site-specific nanobody-oligonucleotide conjugation for super-resolution imaging.
Journal of Biological Methods,
9(1), [e159].
https://doi.org/10.14440/jbm.2022.381
Staulund, J.
, Song, P., Qi, H., Thrane, L., Duedahl, P., Weiss, T., Moers, C.
, Keller, A. K., Nørregaard, R., Pedersen, M., Leuvenink, H.
, Kjems, J., Jespersen, B. & Eijken, M. (2022).
Assessing the quality of donor kidneys during normothermic machine perfusion using nanoparticle-based vitality sensors. Abstract fra 3rd ECTORS meeting, Rotterdam, Holland.
Pierre-Ferre, S., Collins, B., Lukacsovich, D., Wen, SA., Chai, Y., Winterer, J., Auerbach, B., Li, M., Yan, J.
, Pedersen, L., Földy, C. & Brown, S. A. (2022).
A single atypical phosphoswitch in specific SCN neurons gates winter seasonality in mice. Poster session præsenteret ved Society for Research on Biological Rhythms Biennial Conference, Amelia Island, Florida, USA.
Frank, M., Cortleven, A., Pěnčík, A., Novak, O. & Schmülling, T. (2022).
The Photoperiod Stress Response in Arabidopsis thaliana Depends on Auxin Acting as an Antagonist to the Protectant Cytokinin.
International Journal of Molecular Sciences ,
23(6), [2936].
https://doi.org/10.3390/ijms23062936
Martín-Rivada, Á., Guerra-Cantera, S., Campillo-Calatayud, A., Andrés-Esteban, E. M., Sánchez Holgado, M., Martos-Moreno, G., Pozo, J., Güemes, M., Soriano-Guillén, L., Pellicer, A.
, Oxvig, C., Frystyk, J., Chowen, J. A., Barrios, V. & Argente, J. (2022).
Pappalysins and Stanniocalcins and Their Relationship With the Peripheral IGF Axis in Newborns and During Development.
The Journal of clinical endocrinology and metabolism,
107(10), 2912-2924.
https://doi.org/10.1210/clinem/dgac453
Keller, J. G., Mizielinski, K.
, Petersen, K. V., Stougaard, M., Knudsen, B. R. & Tesauro, C. (2022).
Simple and Fast Rolling Circle Amplification-Based Detection of Topoisomerase 1 Activity in Crude Biological Samples.
Journal of visualized experiments : JoVE,
190, [e64484].
https://doi.org/10.3791/64484
Pirhaghi, M., Frank, S. A., Alam, P., Nielsen, J., Sereikaite, V., Gupta, A., Strømgaard, K.
, Andreasen, M., Sharma, D., Saboury, A. A.
& Otzen, D. E. (2022).
A penetratin-derived peptide reduces the membrane permeabilization and cell toxicity of α-synuclein oligomers.
Journal of Biological Chemistry,
298(12), [102688].
https://doi.org/10.1016/j.jbc.2022.102688
Kjærgaard, M., Rasmussen, L. S., Vinther, J. N., Andersen, K. R., Andersen, E. S., Lorentzen, E., Thirup, S. S., Otzen, D. & Brodersen, D. E. (2022).
A Semester-Long Learning Path Teaching Computational Skills via Molecular Graphics in PyMOL.
The Biophysicist,
3(2), 106–114.
https://doi.org/10.35459/tbp.2022.000219
He, J., Steffen, J. H., Thulstrup, P. W.
, Pedersen, J. N., Sauerland, M. B.
, Otzen, D. E., Hawkins, C. L., Gourdon, P., Davies, M. J. & Hägglund, P. (2022).
Anastellin impacts on the processing of extracellular matrix fibronectin and stimulates release of cytokines from coronary artery smooth muscle cells.
Scientific Reports,
12(1), [22051].
https://doi.org/10.1038/s41598-022-26359-9
Zev, S., Ringel, M.
, Driller, R., Loll, B., Brück, T. & Major, D. T. (2022).
Understanding the competing pathways leading to hydropyrene and isoelisabethatriene.
Beilstein Journal of Organic Chemistry,
18, 972-978.
https://doi.org/10.3762/bjoc.18.97
Salimi, M., Javadi, A. H.
, Nazari, M., Bamdad, S., Tabasi, F., Parsazadegan, T., Ayene, F., Karimian, M., Gholami-Mahtaj, L., Shadnia, S., Jamaati, H., Salimi, A. & Raoufy, M. R. (2022).
Nasal Air Puff Promotes Default Mode Network Activity in Mechanically Ventilated Comatose Patients: A Noninvasive Brain Stimulation Approach.
Neuromodulation: Technology at the Neural Interface,
25(8), 1351-1363.
https://doi.org/10.1016/j.neurom.2021.11.003
Maccio, U., Mihic, A., Lenggenhager, D., Kolm, I., Mittmann, C., Heikenwälder, M.
, Lorentzen, A. & Mihic-Probst, D. (2022).
Hypoxia and Ezrin Expression in Primary Melanoma Have High Prognostic Relevance.
International Journal of Molecular Sciences ,
23(18), [10745].
https://doi.org/10.3390/ijms231810745
Schmauck-Medina, T., Molière, A., Lautrup, S., Zhang, J., Chlopicki, S., Madsen, H. B., Cao, S., Soendenbroe, C., Mansell, E., Vestergaard, M. B., Li, Z., Shiloh, Y., Opresko, P. L., Egly, J. M., Kirkwood, T., Verdin, E., Bohr, V. A., Cox, L. S.
, Stevnsner, T. ... Fang, E. F. (2022).
New hallmarks of ageing: a 2022 Copenhagen ageing meeting summary.
Aging,
14(16), 6829-6839.
https://doi.org/10.18632/aging.204248
Zarrabian, M., Montiel, J.
, Sandal, N., Ferguson, S., Jin, H., Lin, Y. Y., Klingl, V., Marín, M., James, E. K., Parniske, M.
, Stougaard, J. & Andersen, S. U. (2022).
A Promiscuity Locus Confers Lotus burttii Nodulation with Rhizobia from Five Different Genera.
Molecular plant-microbe interactions : MPMI,
35(11), 1006-1017.
https://doi.org/10.1094/MPMI-06-22-0124-R
Meisl, G., Xu, C. K., Taylor, J. D., Michaels, T. C. T., Levin, A.
, Otzen, D., Klenerman, D., Matthews, S., Linse, S.
, Andreasen, M. & Knowles, T. P. J. (2022).
Uncovering the universality of self-replication in protein aggregation and its link to disease.
Science Advances,
8(32), [eabn6831].
https://doi.org/10.1126/sciadv.abn6831
Lassen, L. B., Thomsen, M. S., Basso, E.
, Füchtbauer, E. M., Füchtbauer, A., Outeiro, T. F.
, Jensen, P. H. & Moos, T. (2022).
Mutation of Tyrosine Sites in the Human Alpha-Synuclein Gene Induces Neurotoxicity in Transgenic Mice with Soluble Alpha-Synuclein Oligomer Formation.
Cells,
11(22), [3673].
https://doi.org/10.3390/cells11223673
Petersen, K. V., Tesauro, C., Hede, M. S.
, Pages, C., Marcussen, L. B., Keller, J. G., Bugge, M.
, Holm, K., Bjergbæk, L., Stougaard, M., Wejse, C. & Knudsen, B. R. (2022).
Rolling Circle Enhanced Detection of Specific Restriction Endonuclease Activities in Crude Cell Extracts.
Sensors,
22(20), [7763].
https://doi.org/10.3390/s22207763
Overgaard, C. K.
, Tao, K., Zhang, S., Christensen, B. T., Blahovska, Z., Radutoiu, S., Kelly, S. & Dueholm, M. K. D. (2022).
Application of ecosystem-specific reference databases for increased taxonomic resolution in soil microbial profiling.
Frontiers in Microbiology,
13, [942396].
https://doi.org/10.3389/fmicb.2022.942396
Neumann, C., Rosenbaek, L. L., Flygaard, R. K., Habeck, M., Karlsen, J. L., Wang, Y., Lindorff-Larsen, K.
, Gad, H. H., Hartmann, R., Lyons, J. A., Fenton, R. A. & Nissen, P. (2022).
Cryo-EM structure of the human NKCC1 transporter reveals mechanisms of ion coupling and specificity.
The EMBO Journal,
41(23), [e110169].
https://doi.org/10.15252/embj.2021110169
Petriman, N. A., Loureiro-López, M., Taschner, M.
, Zacharia, N. K., Georgieva, M. M.
, Boegholm, N., Wang, J., Mourão, A., Russell, R. B., Andersen, J. S.
& Lorentzen, E. (2022).
Biochemically validated structural model of the 15-subunit intraflagellar transport complex IFT-B.
The EMBO Journal,
41(24), [e112440].
https://doi.org/10.15252/embj.2022112440
Bush, J. A., Meyer, S. M., Fuerst, R., Tong, Y., Li, Y., Benhamou, R. I., Aikawa, H., Zanon, P. R. A., Gibaut, Q. M. R., Angelbello, A. J., Gendron, T. F., Zhang, Y. J., Petrucelli, L.
, Heick Jensen, T., Childs-Disney, J. L. & Disney, M. D. (2022).
A blood-brain penetrant RNA-targeted small molecule triggers elimination of r(G4C2)exp in c9ALS/FTD via the nuclear RNA exosome.
Proceedings of the National Academy of Sciences of the United States of America,
119(48), [e2210532119].
https://doi.org/10.1073/pnas.2210532119
Rowe, T. B., Stafford, T. W., Fisher, D. C.
, Enghild, J. J., Quigg, J. M., Ketcham, R. A., Sagebiel, J. C., Hanna, R. & Colbert, M. W. (2022).
Human Occupation of the North American Colorado Plateau ∼37,000 Years Ago.
Frontiers in Ecology and Evolution,
10, [903795].
https://doi.org/10.3389/fevo.2022.903795
Neumann, C., Focht, D., Trampari, S., Lyons, J. A. & Nissen, P. (2022).
Variations on a theme: Crystal forms of the amino-acid transporter MhsT.
Acta Crystallographica Section F: Structural Biology Communications,
78(Part 8), 297-305.
https://doi.org/10.1107/S2053230X22007154
Sheffer, M. M., Cordellier, M., Forman, M.
, Grewoldt, M., Hoffmann, K., Jensen, C., Kotz, M., Král, J., Kuss, A. W., Líznarová, E. & Uhl, G. (2022).
Identification of sex chromosomes using genomic and cytogenetic methods in a range-expanding spider, Argiope bruennichi (Araneae: Araneidae).
Biological Journal of The Linnean Society,
136(3), 405–416.
https://doi.org/10.1093/biolinnean/blac039
Keller, J. G., Hymøller, K. M., Thorsager, M. E., Hansen, N. Y., Erlandsen, J. U., Tesauro, C., Simonsen, A. K. W., Andersen, A. B., Vandsø Petersen, K., Holm, L. L.
, Stougaard, M., Andresen, B. S., Kristensen, P., Frøhlich, R.
& Knudsen, B. R. (2022).
Topoisomerase 1 inhibits MYC promoter activity by inducing G-quadruplex formation.
Nucleic Acids Research,
50(11), 6332-6342.
https://doi.org/10.1093/nar/gkac482
Leslie, J. S., Hjeij, R., Vivante, A., Bearce, E. A., Dyer, L.
, Wang, J., Rawlins, L., Kennedy, J., Ubeyratna, N., Fasham, J., Irons, Z. H., Craig, S. B., Koenig, J., George, S., Pode-Shakked, B., Bolkier, Y., Barel, O., Mane, S.
, Frederiksen, K. K. ... Baple, E. L. (2022).
Biallelic DAW1 variants cause a motile ciliopathy characterized by laterality defects and subtle ciliary beating abnormalities.
Genetics in Medicine,
24(11), 2249-2261.
https://doi.org/10.1016/j.gim.2022.07.019
Aagaard, A., Liu, S., Tregenza, T.
, Braad Lund, M., Schramm, A., Verhoeven, K. J. F.
, Bechsgaard, J. & Bilde, T. (2022).
Adapting to climate with limited genetic diversity: Nucleotide, DNA methylation and microbiome variation among populations of the social spider Stegodyphus dumicola.
Molecular Ecology,
31(22), 5765-5783.
https://doi.org/10.1111/mec.16696
Josipovic, N.
, Ebbesen, K. K., Zirkel, A., Danieli-Mackay, A., Dieterich, C., Kurian, L.
, Hansen, T. B. & Papantonis, A. (2022).
circRAB3IP modulates cell proliferation by reorganizing gene expression and mRNA processing in a paracrine manner.
RNA (New York, N.Y.),
28(11), 1481-1495.
https://doi.org/10.1261/rna.079195.122
Khateb, H., Sørensen, R. S., Cramer, K., Eklund, A. S.
, Kjems, J., Meyer, R. L., Jungmann, R.
& Sutherland, D. S. (2022).
The Role of Nanoscale Distribution of Fibronectin in the Adhesion of Staphylococcus aureus Studied by Protein Patterning and DNA-PAINT.
ACS Nano,
16(7), 10392-10403.
https://doi.org/10.1021/acsnano.2c00630
Kobberø, S. D., Gajhede, M., Mirza, O. A.
, Kløverpris, S., Kjær, T. R., Mikkelsen, J. H., Boesen, T. & Oxvig, C. (2022).
Structure of the proteolytic enzyme PAPP-A with the endogenous inhibitor stanniocalcin-2 reveals its inhibitory mechanism.
Nature Communications,
13(1), [6084].
https://doi.org/10.1038/s41467-022-33698-8
Fuchs, E., Rudnik-Jansen, I., Dinesen, A., Selnihhin, D., Mandrup, O. A., Thiam, K.
, Kjems, J., Pedersen, F. S. & Howard, K. A. (2022).
An albumin-angiotensin converting enzyme 2-based SARS-CoV-2 decoy with FcRn-driven half-life extension.
Acta Biomaterialia,
153, 411-418.
https://doi.org/10.1016/j.actbio.2022.09.048
Yamamoto, K.
, Scavenius, C., Meschis, M. M., Gremida, A. M. E.
, Mogensen, E. H., Thøgersen, I. B., Bonelli, S., Scilabra, S. D., Jensen, A., Santamaria, S., Ahnström, J., Bou-Gharios, G.
, Enghild, J. J. & Nagase, H. (2022).
A top-down approach to uncover the hidden ligandome of low-density lipoprotein receptor-related protein 1 in cartilage.
Matrix Biology,
112, 190-218.
https://doi.org/10.1016/j.matbio.2022.08.007
Harwood, S. L., Diep, K., Nielsen, N. S., Jensen, K. T. & Enghild, J. J. (2022).
The conformational change of the protease inhibitor α2-macroglobulin is triggered by the retraction of the cleaved bait region from a central channel.
Journal of Biological Chemistry,
298(8), [102230].
https://doi.org/10.1016/j.jbc.2022.102230
Ung, K. L., Winkler, M., Schulz, L., Kolb, M., Janacek, D. P.
, Dedic, E., Stokes, D. L., Hammes, U. Z.
& Pedersen, B. P. (2022).
Structures and mechanism of the plant PIN-FORMED auxin transporter.
Nature,
609(7927), 605-610.
https://doi.org/10.1038/s41586-022-04883-y
Nayeri, Z., Aliakbari, F., Afzali, F., Parsafar, S., Gharib, E.
, Otzen, D. E. & Morshedi, D. (2022).
Characterization of exogenous αSN response genes and their relation to Parkinson's disease using network analyses.
Frontiers in Pharmacology,
13, [966760].
https://doi.org/10.3389/fphar.2022.966760
Skoven, C. S., Tomasevic, L.
, Kvitsiani, D., Pakkenberg, B., Dyrby, T. B. & Siebner, H. R. (2022).
Dose-response relationship between the variables of unilateral optogenetic stimulation and transcallosal evoked responses in rat motor cortex.
Frontiers in Neuroscience,
16, [968839].
https://doi.org/10.3389/fnins.2022.968839
Hangiu, O., Compte, M.
, Dinesen, A., Navarro, R., Tapia-Galisteo, A.
, Mandrup, O. A., Erce-Llamazares, A., Lázaro-Gorines, R., Nehme-Álvarez, D., Domínguez-Alonso, C.
, Harwood, S. L., Alfonso, C., Blanco, B., Rubio-Pérez, L., Jiménez-Reinoso, A., Díez-Alonso, L., Blanco, F. J., Sanz, L.
, Howard, K. A. & Álvarez-Vallina, L. (2022).
Tumor targeted 4-1BB agonist antibody-albumin fusions with high affinity to FcRn induce anti-tumor immunity without toxicity.
iScience,
25(9), [104958].
https://doi.org/10.1016/j.isci.2022.104958