Peer-reviewed articles

Publications from the department

Journal covers made by researchers from our department

Latest peer-reviewed publications at MBG

Sort by: Date | Author | Title

Displaying results 4001 to 62 out of 62

Peer-reviewed publications at MBG - all years

Sort by: Date | Author | Title

Andersen, F. F., Knudsen, B., Oliveira, C. L. P. D., Hougaard, R. F., Krüger, D., Bungert, J., Agbandje-McKenna, M., McKenna, R., Jensen, S. J., Veigaard, C., Koch, J., Rubinstein, J. L., Guldbrandtsen, B., Hede, M. S., Karlsson, G., Andersen, A. H., Pedersen, J. S. & Knudsen, B. R. (2008). Assembly and structural analysis of a covalently closed nano-scale DNA cage. Nucleic Acids Research, 36(4), 1113-1119. https://doi.org/10.1093/nar/gkm1124

Afshari, NA., Bahadur, RP., Eifrig Jr, DE., Thøgersen, I., Enghild, J. J. & Klintworth, GK. (2008). Atypical asymmetric lattice corneal dystrophy associated with a novel homozygous mutation (Val624Met) in the TGFBI gene. Molecular Vision, 14(12).

Arpanaei, A., Pillai, S., Meyer, R. L., Besenbacher, F., Bernbom, N., Jensen, R. L., Gram, L., Enghild, J. J., Petersen, S. V. & Kingshott, P. (2008). Bacteria repellent properties of adsorbed fish proteins. Paper presented at Danish Colloid and Interface Society Annual Meeting, Aarhus, Denmark.

McClendon, A., Gentry, A., Dickey, J., Brinch, M., Bendsen, S. P., Andersen, A. H. & Osheroff, N. (2008). Bimodal Recognition of DNA Geometry by Human Topoisomerase IIα: Preferential Relaxation of Positively Supercoiled DNA Requires Elements in the C-terminal Domain. Biochemistry, 47, 13169-78.

Hebelstrup, K. H., Østergaard-Jensen, E. & Hill, R. D. (2008). Bioimaging techniques for subcellular localization of plant hemoglobins and measurement of hemoglobin-dependent nitric oxide scavenging in planta. Methods in Enzymology, 437, 595-604. https://doi.org/10.1016/S0076-6879(07)37030-4

Jacobsen, J., Visse, R., Sørensen, HP., Enghild, J. J., Brew, K., Wewer, UM. & Nagase, H. (2008). Catalytic Properties of ADAM12 and Its Domain Deletion Mutants. Biochemistry.

Rattan, S. (2008). Cellular senescence in vitro. Encyclopedia of Life Sciences, 2008. (doi: 10.1002/9780470015902.a0002567.pub2. In Encyclopedia of Life Sciences https://doi.org/10.1002/9780470015902.a0002567.pub2

Schar, C. R., Jensen, J. K., Christensen, A., Blouse, G., Peterson, C. B. & Andreasen, P. (2008). Characterisation of a site on pai-1 that binds to vitronectin outside of the somatomedin B domain. Journal of Biological Chemistry, 283(42), 28487-28496.

Nesgaard, L. W., Hoffmann, S. V., Andersen, C. B., Malmendal, A. & Otzen, D. (2008). Characterization of Dry Globular Proteins and Protein Fibrils by Synchrotron Radiation Vacuum UV Circular Dichroism. Biopolymers, 89(9), 779-795.

Pallesen, L. T., Pedersen, L. R. L., Petersen, T. E., Knudsen, C. R. & Rasmussen, J. T. (2008). Characterization of human mucin (MUC15) and identification of ovine and caprine orthologs. Journal of Dairy Science, 91(12), 4477-83.

Borges, K., Gearing, M., Rittling, S., Sørensen, E. S., Kotloski, R., Denhardt, D. T. & Dingledine, R. (2008). Characterization of osteopontin expression and function after status epilepticus. Epilepsia, 49, 1675-1685.

Howard, K. A., Paludan, S. R., Behlke, M. A., Besenbacher, F., Deleuran, B. W. & Kjems, J. (2008). Chitosan/siRNA nanoparticle-mediated TNF-alpha knockdown in peritoneal macrophages for anti-inflammatory treatment in a murine arthritis model. Molecular Therapy, 17(1), 162-168. https://doi.org/10.1038/mt.2008.220

Torarinsson, E., Yao, Z., Wiklund, E. D., Bramsen, J. B., Hansen, C. A., Kjems, J., Tommerup, N., Ruzzo, W. L. & Gorodkin, J. (2008). Comparative genomics beyond sequence-based alignments: RNA structures in the ENCODE regions. Genome Research, 18(2), 242-251. https://doi.org/10.1101/gr.6887408

Stissing, M., Mailund, T., Pedersen, C. S., Brodal, G. S. & Fagerberg, R. (2008). Computing the all-pairs quartet distance on a set of evolutionary trees. Journal of Bioinformatics and Computational Biology, 6(1), 37-50.

Johnson, S. S., Hebsgaard, M. B., Christensen, T. R., Mastepanov, M., Nielsen, R., Munch, K., Brand, T., Gilbert, M. T. P., Zuber, M. T., Bunce, M., Rønn, R., Gilichinsky, D., Froese, D. & Willerslev, E. (2008). Correction for Johnson et al., Ancient bacteria show evidence of DNA repair. Proceedings of the National Academy of Sciences (PNAS), 105(30). https://doi.org/10.1073/pnas.0804198105

Jørgensen, J. M., Sørensen, F. B., Bendix, K., Nielsen, J. L., Funder, A. M. D., Karkkainen, M. J., Tainola, T., Pedersen, F. S., Sørensen, A. B., Kühle, A. V. D. A. & d'Amore, F. A. (2008). Correlation between epstein-barr virus (EBV) RNA expression and vascular endothelial growth factor (VEGF) expression in different subtypes of peripheral T-cell lymphomas (PTCL) and prognostic implications. In ANNALS OF ONCOLOGY (Vol. 19, pp. 113-113)

Aagaard, J., Freiesleben, M. & Foldager, L. (2008). Crisis homes for adult psychiatric patients. Social Psychiatry and Psychiatric Epidemiology, 43, 403-409. https://doi.org/10.1007/s00127-008-0311-7

Andersen, M. Ø., Howard, K. A., Paludan, S. R., Besenbacher, F. & Kjems, J. (2008). Delivery of siRNA from lyophilized polymeric surfaces. Biomaterials, 29(4), 506-512. https://doi.org/10.1016/j.biomaterials.2007.10.003

Giehm, L., Christensen, C., Boas, U., Heegaard, P. M. H. & Otzen, D. (2008). Dendrimers destabilize proteins in a generation-dependent manner involving eletrostatic interactions. Biopolymers, 89, 522-529.

Lund, M. S., Guldbrandtsen, B., Buitenhuis, A. J., Thomsen, B. & Bendixen, C. (2008). Detection of quantitative trait loci in Danish Holstein cattle affecting clinical mastitis, somatic cell score, udder conformation traits, and assessment of associated effects on milk yield. Journal of Dairy Science, 91(9), 4028-4036. https://doi.org/10.3168/jds.2007-0290

Otzen, D. (2008). Differential adsorption of variants of the thermomyces lanuginosus lipase on a hydrophobic surface suggests a role for local flexibility. Colloids and Surfaces B: Biointerfaces, (64), 223-228.

Andersen, E. S., Dong, M., Nielsen, M. M., Jahn, K., Lind-Thomsen, A., Mamdouh, W., Gothelf, K. V., Besenbacher, F. & Kjems, J. (2008). DNA origami design of dolphin-shaped structures with flexible tails. A C S Nano, 2(6), 1213-8. https://doi.org/10.1021/nn800215j

Kelbaek, H., Thuesen, L., Helqvist, S., Clemmensen, P., Kløvgaard, L., Kaltoft, A., Andersen, B., Thuesen, H. H. H., Engstrøm, T., Bøtker, H. E., Saunamäki, K., Krusell, L. R., Jørgensen, E., Hansen, H.-H. T., Christiansen, E. H., Ravkilde, J., Køber, L., Kofoed, K. F., Terkelsen, C. J. ... DEDICATION Investigators (2008). Drug-eluting versus bare metal stents in patients with st-segment-elevation myocardial infarction: eight-month follow-up in the Drug Elution and Distal Protection in Acute Myocardial Infarction (DEDICATION) trial. Circulation, 118(11), 1155-62. https://doi.org/10.1161/CIRCULATIONAHA.107.758698

Svane, A. S. P., Jahn, K., Deva, T., Malmendal, A., Otzen, D., Dittmer, J. & Nielsen, N. C. (2008). Early Stages of Amyloid Fibril Formation Studied by Liquid-State NMR: The Peptide Hormone Glucagon. Biophysical Journal, 95(1), 366 – 377. https://doi.org/10.1529/biophysj.107.122895

Knudsen, S. K., Westergaard, U. B., Frantzmann, M., Stensballe, A. & Otzen, D. (2008). Effect of glycosylation on biphysical and flocculative properties of the extracellular domain of Ag43. Biochemical Journal, (412), 563-577.

Dubin, G., Stec-Niemczyk, J., Kisielewska, M., Pustelny, K., Popowicz, GM., Bista, M., Kantyka, T., Boulware, KT., Stennicke, HR., Czarna, A., Phopaisarn, M., Daugherty, PS., Thøgersen, I., Enghild, J. J., Thornberry, N., Dubin, A. & Potempa, J. (2008). Enzymatic activity of the Staphylococcus aureus SplB serine protease is induced by substrates containing the sequence Trp-Glu-Leu-Gln. Journal of Molecular Biology, 379(30).

Schmid, M., Rougemaille, M., Libri, D. & Jensen, T. H. (2008). Estimating nuclear mRNA decay in S. cerevisiae. Methods in Enzymology.

Hebelstrup, K. H. & Jensen, E. Ø. (2008). Expression of NO scavenging hemoglobin is involved in the timing of bolting in Arabidopsis thaliana. Planta, 227(4), 917-27. https://doi.org/10.1007/s00425-007-0667-z

Lorentzen, E. & Conti, E. (2008). Expression, reconstitution, and structure of an archaeal RNA degrading exosome. Meth. Enzymol., 447, 417-435.

Kliment, CR., Tobolewski, JM., Manni, ML., Tan, RJ., Enghild, J. J. & Oury, TD. (2008). Extracellular superoxide dismutase protects against matrix degradation of heparan sulfate in the lung. Antioxidants & Redox Signaling.

Stapulionis, R., Wang, Y., Dempsey, G. T., Khudaravalli, R., Nielsen, K. M., Cooperman, B. S., Goldman, Y. E. & Knudsen, C. R. (2008). Fast in vitro translation system immobilized on a surface via specific biotinylation of the ribosome. Biological Chemistry, 389(9), 1239-1249.

Sahana, G., Lund, M. S., Andersson-Eklund, L., Hastings, N., Fernandez, A., Iso-Touru, T., Thomsen, B., Viitala, S., Sørensen, P., Williams, J. L. & Vilkki, J. (2008). Fine Mapping QTL for mastitis resistance on BTA9 in three Nordic red cattle breeds. Animal Genetics, 39(4), 354-362. https://doi.org/10.1111/j.1365-2052.2008.01729.x

Arpanaei, A., Pillai, S., Meyer, R. L., Besenbacher, F., Bernbom, N., Jensen, R. L., Gram, L., Enghild, J. J., Petersen, S. V. & Kingshott, P. (2008). Fish Protein Adsorption to Different Surfaces and Anti-cell Adhesive Properties of Adsorbed Layers.. Paper presented at How to Look at Protein Adsorption - A Practical Approach, Copenhagen University, Copenhagen, Denmark.

Runager, K., Enghild, J. J. & Klintworth, G. (2008). Focus on molecules: Transforming growth factor beta induced protein (TGFBIp). Experimental Eye Research.

Kjeldbjerg, A., Villesen, P., Aagaard, L. & Pedersen, F. S. (2008). Gene conversion and purifying selection of a placenta-specific ERV-V envelope gene during simian evolution. BMC Evolutionary Biology, 8(1), 266. https://doi.org/10.1186/1471-2148-8-266

Kadarmideen, H. N. (2008). Genetical systems biology in livestock: Application to gonadotrophin releasing hormone and reproduction. IET Systems Biology, 2(6), 423-441. https://doi.org/10.1049/iet-syb:20070072

Larsen, A. K., Lametsch, R., Elce, J. S., Larsen, J. K., Thomsen, B., Larsen, M. R., Lawson, M. A., Greer, P. A. & Ertbjerg, P. (2008). Genetic disruption of calpain correlates with loss of membrane blebbing and differential expression of RhoGDI-1, cofilin and tropomyosin. Biochemical Journal, 411, 657-666. https://doi.org/10.1042/BJ20070522

Zhukov, V. A., Borisov, A. Y., Kuznetsova, E. V., Madsen, L. H., Moffet, M. D., Ovchinnikova, E. S., Pinaev, A. G., Radutoiu, S., Rozov, S. M., Rychagova, T. S., Shtark, O. Y., Tsyganov, V. E., Voroshilova, V. A., Stougaard, J., Weeden, N. F. & Tikhonovich, I. A. (2008). GENOME SYNTENY OF PEA AND MODEL LEGUMES: FROM MUTATION THROUGH GENETIC MAPPING TO THE GENES. In FD. Dakora, SBM. Chimphango, AJ. Valentine, C. Elmerich & WE. Newton (Eds.), BIOLOGICAL NITROGEN FIXATION: TOWARDS POVERTY ALLEVIATION THROUGH SUSTAINABLE AGRICULTURE (pp. 223-224). Springer.

Schierup, M. H. & Vekemans, X. (2008). Genomic consequences of selection on self-incompatibility genes. Current Opinion in Plant Biology, 116-122. https://doi.org/10.1016/j.pbi.2008.01.003

Jonstrup, A. T., Thomsen, T., Wang, Y., Knudsen, B. R., Koch, J. & Andersen, A. H. (2008). Hairpin structures formed by alpha satellite DNA of human centromeres are cleaved by human topoisomerase II alpha. Nucleic Acids Research, 36(19), 6165-74. https://doi.org/10.1093/nar/gkn640

Rattan, S. (2008). Hormesis in aging. Ageing Research Reviews, 7(1), 63-78.

Berge, U., Kristensen, P. & Rattan, S. (2008). Hormetic modulation of differentiation of normal human epidermal keratinocytes undergoing replicative senescence in vitro. Experimental Gerontology, 43, 658-662.

Hoffmann, HJ., Tabaksblat, LM., Enghild, J. J. & Dahl, R. (2008). Human skin keratins are the major proteins in exhaled breath condensate. European Respiratory Journal.

Hoffmann, H. J., Tabaksblat, L. M., Enghild, J. J. & Dahl, R. (2008). Human skin keratins are the major proteins in exhaled breath condensate. European Respiratory Journal, 31(2), 380-4. https://doi.org/10.1183/09031936.00059707

Hougaard, R. F., Juul, S., Vinther, M., Veigaard, C., Hede, M. S. & Andersen, F. F. (2008). Identification of a minimal functional linker in human topoisomerase I by domain swapping with Cre recombinase. Biochemistry, 47(27), 7127-7136. https://doi.org/10.1021/bi800031k

Rattan, S. (2008). Increased molecular damage and heterogeneity as the basis of aging. Biological Chemistry, 389, 267-272.

Sehgal, P., Sharma, D., Larsen, K. L., Wimmer, R., Otzen, D. & Doe, H. (2008). Influence of beta-Cyclodextrin on the Mixed Micellization Process of Sodium Dodecyl Sulfate and Sodium Lauroyl Sarcosine and Formation of Inclusion Complexes. Journal of Dispersion Science and Technology, 29, 128-133.

Mikkelsen, J. H., Nielsen, C. G., Kristensen, P., Overgaard, M. T., Poulsen, C. B., Laursen, L. S. & Oxvig, C. (2008). Inhibition of the proteolytic activity of pregnancy-associated plasma protein-A by targeting substrate exosite binding. Journal of Biological Chemistry, 283(24, s. 16772-80).

Sehgal, P., Sharma, M., Larsen, K. L., Wimmer, R., Doe, H. & Otzen, D. (2008). Interactions of g-Cyclodextrin with the Mixed Micelles of Anionic Surfactants and Their Inclusion Complexes Formation. Journal of Dispersion Science and Technology, 29, 885-890. https://doi.org/10.1007/s00396-006-1466-y

Sehgal, P., Sharma, M., Larsen, K. L., Wimmer, R., Doe, H. & Otzen, D. (2008). Interactions of γ-Cyclodextrin with the Mixed Micelles of Anionic Surfactants and Their Inclusion Complexes Formation. Journal of Dispersion Science and Technology, 29, 885-890. https://doi.org/10.1080/01932690701783390