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Latest peer-reviewed publications at MBG

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Peer-reviewed publications at MBG - all years

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Gavrilovic, S., Yan, Z., Jurkiewicz, A. M., Stougaard, J. & Markmann, K. (2016). Inoculation insensitive promoters for cell type enriched gene expression in legume roots and nodules. Plant Methods, 12(1), Article 4. https://doi.org/10.1186/s13007-016-0105-y

Jandu, H., Aluzaite, K., Fogh, L., Thrane, S. W., Noer, J. B., Proszek, J., Do, K. N., Hansen, S. N., Damsgaard, B., Nielsen, S. L., Stougaard, M., Knudsen, B. R., Moreira, J., Hamerlik, P., Gajjar, M., Smid, M., Martens, J., Foekens, J., Pommier, Y. ... Stenvang, J. (2016). Molecular characterization of irinotecan (SN-38) resistant human breast cancer cell lines. BMC Cancer, 16(1), Article 34. https://doi.org/10.1186/s12885-016-2071-1

Saric, A., Andreau, K., Armand, A.-S., Møller, I. M. & Petit, P. X. (2016). Barth Syndrome: From Mitochondrial Dysfunctions Associated with Aberrant Production of Reactive Oxygen Species to Pluripotent Stem Cell Studies. Frontiers in Genetics, 6(JAN), Article 359. https://doi.org/10.3389/fgene.2015.00359

Vu Quang, H., Vinding, M. S., Xia, D., Nielsen, T., Ullisch, M. G., Dong, M., Nielsen, N. C. & Kjems, J. (2016). Chitosan-coated Poly(lactic-co-glycolic acid) Perfluorooctyl Bromide Nanoparticles for Cell Labeling in 19F Magnetic Resonance Imaging. Carbohydrate Polymers, 136, 936-944. https://doi.org/10.1016/j.carbpol.2015.09.076

Vad-Nielsen, J., Jakobsen, K. R., Daugaard, T. F., Thomsen, R., Brügmann, A., Sørensen, B. S. & Nielsen, A. L. (2016). Regulatory dissection of the CBX5 and hnRNPA1 bi-directional promoter in human breast cancer cells reveals novel transcript variants differentially associated with HP1α down-regulation in metastatic cells. B M C Cancer, 16(1), 32. Article 32. https://doi.org/10.1186/s12885-016-2059-x

Christensen, B., Zachariae, E. D., Scavenius, C., Kløverpris, S., Oxvig, C., Petersen, S. V., Enghild, J. J. & Sørensen, E. S. (2016). Transglutaminase 2-Catalyzed Intramolecular Cross-Linking of Osteopontin. Biochemistry, 55(2), 294-303. https://doi.org/10.1021/acs.biochem.5b01153

Yusoff, M. F. B. M., Guo, Z. & Fedosov, S. (2016). Development of kinetic model for biodiesel production using liquid lipase as a biocatalyst, esterification step. Biochemical Engineering Journal, 105(Part A), 52-61. https://doi.org/10.1016/j.bej.2015.09.003

Consortia (2016). Genome-wide association analysis identifies three new susceptibility loci for childhood body mass index. Human Molecular Genetics, 25(2), 389-403. https://doi.org/10.1093/hmg/ddv472

Kim, J.-Y., Sahu, S., Yau, Y.-H., Wang, X., Shochat, S. G., Nielsen, P. H., Dueholm, M. S., Otzen, D. E., Lee, J., Delos Santos, M. M. S., Yam, J. K. H., Kang, N.-Y., Park, S.-J., Kwon, H., Seviour, T. W., Yang, L., Givskov, M. & Chang, Y.-T. (2016). Detection of pathogenic biofilms with bacterial amyloid targeting fluorescent probe, CDy11. Journal of the American Chemical Society, 138(1), 402-407. https://doi.org/10.1021/jacs.5b11357

Tian, P., Lindorff-Larsen, K., Boomsma, W., Jensen, M. H. & Otzen, D. E. (2016). A Monte Carlo Study of the Early Steps of Functional Amyloid Formation. PLoS One, 11(1), Article e0146096. https://doi.org/10.1371/journal.pone.0146096

Llinares, M. L., Mapendano, C. K., Martlev, L. H., Lykke-Andersen, S. & Jensen, T. H. (2016). Relationships between PROMPT and gene expression. RNA Biology, 13(1), 6-14. https://doi.org/10.1080/15476286.2015.1109769

Kogelman, L. J. A. & Kadarmideen, H. N. (2016). Applications of systems genetics and biology for obesity using pig models. In Systems Biology in Animal Production and Health, Vol. 1 (pp. 25-42). Springer International Publishing. https://doi.org/10.1007/978-3-319-43335-6_2

Søndergaard, D. A., Knudsen, M. & Pedersen, C. S. (2016). Computational Classification of P-Type ATPases. Methods in Molecular Biology, 1377, 493-502. https://doi.org/10.1007/978-1-4939-3179-8

Mazzoni, G. & Kadarmideen, H. N. (2016). Computational methods for quality check, preprocessing and normalization of RNA-seq data for systems biology and analysis. In Systems Biology in Animal Production and Health, Vol. 2 (pp. 61-77). Springer International Publishing. https://doi.org/10.1007/978-3-319-43332-5_3

Schlosser, A., Pilecki, B., Hemstra, L. E., Kejling, K., Kristmannsdottir, G. B., Wulf-Johansson, H., Moeller, J. B., Füchtbauer, E. M., Nielsen, O., Kirketerp-Møller, K., Dubey, L. K., Hansen, P. B. L., Stubbe, J., Wrede, C., Hegermann, J., Ochs, M., Rathkolb, B., Schrewe, A., Bekeredjian, R. ... Sorensen, G. L. (2016). MFAP4 Promotes Vascular Smooth Muscle Migration, Proliferation and Accelerates Neointima Formation. Arteriosclerosis, Thrombosis, and Vascular Biology, 36(1), 122-133. https://doi.org/10.1161/ATVBAHA.115.306672

Kadarmideen, H. N. (2016). Preface. In Systems Biology in Animal Production and Health, Vol. 1 (pp. ix-xi). Springer International Publishing. https://doi.org/10.1007/978-3-319-43335-6

Kadarmideen, H. N. (2016). Preface. In Systems Biology in Animal Production and Health, Vol. 2 (pp. ix-xi). Springer International Publishing. https://doi.org/10.1007/978-3-319-43332-5

Gregersen, J. L., Fedosova, N., Nissen, P. & Boesen, T. (2016). Reconstitution of Na,K-ATPase in Nanodiscs. Methods in Molecular Biology, 1377, 403-409. https://doi.org/10.1007/978-1-4939-3179-8_36

Kadarmideen, H. N. (2016). Systems biology in animal production and health, vol. 1. Springer International Publishing. https://doi.org/10.1007/978-3-319-43335-6

Kadarmideen, H. N. (2016). Systems biology in animal production and health, vol. 2. Springer International Publishing. https://doi.org/10.1007/978-3-319-43332-5

Brito, A., Verdugo, R., Hertrampf, E., Miller, J. W., Green, R., Fedosov, S. N., Shahab-Ferdows, S., Sanchez, H., Albala, C., Castillo, J. L., Matamala, J. M., Uauy, R. & Allen, L. H. (2016). Vitamin B-12 treatment of asymptomatic, deficient, elderly Chileans improves conductivity in myelinated peripheral nerves, but high serum folate impairs vitamin B-12 status response assessed by the combined indicator of vitamin B-12 status. The American Journal of Clinical Nutrition, 103(1), 250-257. https://doi.org/10.3945/ajcn.115.116509

Todt, D., François, C., Anggakusuma, U., Behrendt, P., Engelmann, M., Knegendorf, L., Vieyres, G., Wedemeyer, H., Hartmann, R., Pietschmann, T., Duverlie, G. & Steinmann, E. (2016). Antiviral Activities of Different Interferon Types and Subtypes against Hepatitis E Virus Replication. Antimicrobial Agents and Chemotherapy, 60(4), 2132-2139. https://doi.org/10.1128/AAC.02427-15

Takechi, M., Kitazawa, T., Hirasawa, T., Hirai, T., Iseki, S., Kurihara, H. & Kuratani, S. (2016). Developmental mechanisms of the tympanic membrane in mammals and non-mammalian amniotes. Congenital Anomalies, 56(1), 12-7. https://doi.org/10.1111/cga.12132

Malaspinas, A.-S., Westaway, M. C., Muller, C., Sousa, V. C., Lao, O., Alves, I., Athanasiadis, G., Cheng, J. Y., Crawford, J. E., Heupink, T. H., Macholdt, E., Peischl, S., Schiffels, S., Subramanian, S., Wright, J. L., Albrechtsen, A., Barbieri, C., Dupanloup, I., Eriksson, A. ... Willerslev, E. (2016). A genomic history of Aboriginal Australia. Nature, 538(7624), 207-214. https://doi.org/10.1038/nature18299

Andersen, P. O., Hansen, B. K., Hansen, L., Nielsen, J., Kjems, J. & Meyer, R. L. (2016). Aptamers as possible targeting agents for delivery of antibiotics to S. aureus biofilms. Abstract from International Symposium on Staphylococci and Staphylococcus infectionsI, Seoul, Korea, Republic of.

Nexø, B. A., Villesen, P., Nissen, K. K., Lindegaard, H. M., Rossing, P., Petersen, T., Tarnow, L., Hansen, B., Lorenzen, T., Hørslev-Petersen, K., Bisgaard Jensen, S., Bahrami, S., Lajer, M., Schmidt, K. L. M., Parving, H.-H., Junker, P. & Laska, M. J. (2016). Are human endogenous retroviruses triggers of autoimmune diseases? Unveiling associations of three diseases and viral loci. Immunologic Research, 64(1), 55-63. https://doi.org/10.1007/s12026-015-8671-z

Hansen, T. B., Venø, M. T., Jensen, T. I., Schaefer, A., Damgaard, C. K. & Kjems, J. (2016). Argonaute-associated short introns are a novel class of gene regulators. Nature Communications, 7, Article 11538. https://doi.org/10.1038/ncomms11538

Andersen, P. O., Kring Hansen, B., Nielsen, J., Hansen, L., Kjems, J. & Meyer, R. L. (2016). A targeting ligand for drug delivery to Staphylococcus aureus biofilms. Abstract from Antimicrobial resistance in microbial biofilms and options for treatment, Ghent, Belgium.

Ebbesen, K. K., Kjems, J. & Hansen, T. B. (2016). Circular RNAs: Identification, biogenesis and function. BBA General Subjects, 1859(1), 163-168. https://doi.org/10.1016/j.bbagrm.2015.07.007

Bechsgaard, J. S., Vanthournout, B., Funch, P., Vestbo, S., Gibbs, R. A., Richards, S., Sanggaard, K. W., Enghild, J. J. & Bilde, T. (2016). Comparative genomic study of arachnid immune systems indicates loss of beta-1,3-glucanase-related proteins and the immune deficiency pathway. Journal of Evolutionary Biology, 29(2), 277-291. https://doi.org/10.1111/jeb.12780

Iacovelli, F., Falconi, M., Knudsen, B. R. & Desideri, A. (2016). Comparative simulative analysis of single and double stranded truncated octahedral DNA nanocages. RSC Advances, 6(42), 35160-35166. https://doi.org/10.1039/c5ra27591a

Basquin, J., Taschner, M. & Lorentzen, E. (2016). Complex Reconstitution from Individual Protein Modules. In M. Vega (Ed.), Advanced Technologies for Protein Complex Production and Characterization. (Vol. 896, pp. 305-314). Springer. https://doi.org/10.1007/978-3-319-27216-0_19

Liu, Y., Pedersen, H. S., Foldager, L., Callesen, H. & Sørensen, M. T. (2016). Developing a responsive mouse in vitro fertilization model with focus on sperm concentration. Animal Reproduction, 13(3), 653. Article abst. no. A279E.

Ten Bruggencate, S. J., Frederiksen, P. D., Pedersen, S. M., Floris-Vollenbroek, E. G., De Bos, E. L. V., Van Hoffen, E. & Wejse, P. L. (2016). Dietary milk-fat-globule membrane affects resistance to diarrheagenic escherichia coli in healthy adults in a randomized, placebo-controlled, double-blind study. Journal of Nutrition, 146(2), 249-255. https://doi.org/10.3945/jn.115.214098

Miclaus, T., Beer, C., Chevallier, J., Scavenius, C., Bochenkov, V. E., Enghild, J. J. & Sutherland, D. S. (2016). Dynamic protein coronas revealed as a modulator of silver nanoparticle sulphidation in vitro. Nature Communications, 7, Article 11770. https://doi.org/10.1038/ncomms11770

Rattan, S. (2016). Experimental foundations of the Hayflick system. In S. Rattan & L. Hayflick (Eds.), Cellular Ageing and Replicative Senescence (1 ed., pp. 15-26). Springer Science+Business Media. https://doi.org/10.1007/978-3-319-26239-0

Paslawski, W., Lorenzen, N. & Otzen, D. E. (2016). Formation and Characterization of α-Synuclein Oligomers. Methods in molecular biology (Clifton, N.J.), 1345, 133-150. https://doi.org/10.1007/978-1-4939-2978-8_9

Mohammad-Beigi, H., Morshedi, D., Shojaosadati, S. A., Pedersen, J. N., Marvian, A. T., Aliakbari, F., Christiansen, G., Pedersen, J. S. & Otzen, D. E. (2016). Gallic acid loaded onto polyethylenimine-coated human serum albumin nanoparticles (PEI-HSA-GA NPs) stabilizes α-synuclein in the unfolded conformation and inhibits aggregation. RSC Advances, 6(88), 85312-85323. https://doi.org/10.1039/c6ra08502d

Consortia (2016). Genome-wide associations for birth weight and correlations with adult disease. Nature, 538(7624), 248-252. https://doi.org/10.1038/nature19806

Ma, X., Jepsen, M. L., Ivarsen, A. K., Nygaard, J. V., Tesauro, C., Knudsen, B. R. & Ho, Y. P. (2016). Intestinal organoids initiated in microfluidics-based double emulsions. In 20th International Conference on Miniaturized Systems for Chemistry and Life Sciences: MicroTAS 2016 (pp. 513-514). Chemical and Biological Microsystems Society.

Svenningsen, K., Venø, M. T., Henningsen, K., Mallien, A. S., Jensen, L., Christensen, T., Kjems, J., Vollmayr, B. & Wiborg, O. (2016). MicroRNA Profiling in the Medial and Lateral Habenula of Rats Exposed to the Learned Helplessness Paradigm: Candidate Biomarkers for Susceptibility and Resilience to Inescapable Shock. PLoS One, 11(8), Article e0160318. https://doi.org/10.1371/journal.pone.0160318

Suravajhala, P., Kogelman, L. J. A. & Kadarmideen, H. N. (2016). Multi-omic data integration and analysis using systems genomics approaches: methods and applications in animal production, health and welfare. Genetics Selection Evolution, 48(1), Article 38. https://doi.org/10.1186/s12711-016-0217-x

Hayashi, Y., Miclaus, T., Engelmann, P., Autrup, H., Sutherland, D. & Scott-Fordsmand, J. J. (2016). Nanosilver pathophysiology in earthworms: Transcriptional profiling of secretory proteins and the implication for the protein corona. Nanotoxicology, 10(3), 303-311. https://doi.org/10.3109/17435390.2015.1054909

Kulminskaya, N. V., Yoshimura, Y., Runager, K., Sørensen, C. S., Bjerring, M., Andreasen, M., Otzen, D. E., Enghild, J. J., Nielsen, N. C. & Mulder, F. A. A. (2016). Near-complete ¹H, ¹³C, ¹⁵N resonance assignments of dimethylsulfoxide-denatured TGFBIp FAS1-4 A546T. Biomolecular N M R Assignments, 10(1), 25-29. https://doi.org/10.1007/s12104-015-9630-2

Rattan, S. (2016). Origin of the Hayflick system, the phenomenon and the limit. In S. Rattan & L. Hayflick (Eds.), Cellular Ageing and Replicative Senescence (pp. 3-14). Springer VS.

Höglund, J., Sørensen, M. T., Larsen, T., Foldager, L., Ferris, C., Bell, M., Carter, F., Santoro, A., Crowe, M. & Ingvartsen, K. L. (2016). Potential for novel metabolite measurements in milk as biomarker phenotypes for dairy traits. In Book of abstracts of the 67th Annual Meeting of the European Federation of Animal Science (pp. 299). Wageningen Academic Publishers, The Netherlands. https://doi.org/10.3920/978-90-8686-830-8