Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Bofill-De Ros, X. (2023). Toward learning the rules that predict siRNA efficacy. Molecular Therapy - Nucleic Acids, 33, 543-544. https://doi.org/10.1016/j.omtn.2023.07.023
Andersen, C. B., Lausdahl, A. K., Nielsen, J., Clausen, M. P., Mulder, F. A. A., Otzen, D. E. & Arnspang, E. C. (2023). 4-Oxo-2-nonenal-Induced α-Synuclein Oligomers Interact with Membranes in the Cell, Leading to Mitochondrial Fragmentation. Biochemistry, 62(16), 2417-2425. https://doi.org/10.1021/acs.biochem.3c00114
Pedersen, D. V., Gytz, H., Winkler, M. B. L., Zarantonello, A., Baumann, N., Hansen, A. G., Thiel, S., Andersen, G. R., Valerius, T. & Laursen, N. S. (2023). Bispecific Complement Engagers for Targeted Complement Activation. Journal of Immunology, 211(3), 403-413. https://doi.org/10.4049/jimmunol.2200952
Wurtz, K. E., Tahamtani, F. M., Foldager, L., Thodberg, K. & Riber, A. B. (2023). Associations of range use with individual behaviour, clinical welfare indicators, fear response and gastrointestinal characteristics of two laying hen hybrids. Applied Animal Behaviour Science, 265, Article 105978. https://doi.org/10.1016/j.applanim.2023.105978
Berntsson, E., Vosough, F., Noormägi, A., Padari, K., Asplund, F., Gielnik, M., Paul, S., Jarvet, J., Tõugu, V., Roos, P. M., Kozak, M., Gräslund, A., Barth, A., Pooga, M., Palumaa, P. & Wärmländer, S. K. T. S. (2023). Characterization of Uranyl (UO22+) Ion Binding to Amyloid Beta (Aβ) Peptides: Effects on Aβ Structure and Aggregation. ACS Chemical Neuroscience, 14(15), 2618-2633. https://doi.org/10.1021/acschemneuro.3c00130
Rani, S., Sørensen, M. T., Estellé, J., Noel, S. J., Nørskov, N., Krogh, U., Foldager, L. & Højberg, O. (2023). Gastrointestinal Microbial Ecology of Weaned Piglets Fed Diets with Different Levels of Glyphosate. Microbiology Spectrum, 11(4), Article e0061523. https://doi.org/10.1128/spectrum.00615-23
Christiansen, M. K., Kjær-Sørensen, K., Clavsen, N. C., Dittmann, S., Jensen, M. F., Guldbrandsen, H. Ø., Pedersen, L. N., Sørensen, R. H., Lildballe, D. L., Müller, K., Müller, P., Vogel, K., Rudic, B., Borggrefe, M., Oxvig, C., Aalkjær, C., Schulze-Bahr, E., Matchkov, V., Bundgaard, H. & Jensen, H. K. (2023). Genetic analysis identifies the SLC4A3 anion exchanger as a major gene for short QT syndrome. Heart Rhythm, 20(8), 1136-1143. https://doi.org/10.1016/j.hrthm.2023.02.010
Bang Madsen, K., Liu, X., Albiñana, C., Jóhann Vilhjálmsson, B., Agerbo, E., Mortensen, P. B., Hougaard, D. M., Nordentoft, M., Werge, T., Mors, O., Børglum, A. D. & Munk-Olsen, T. (2023). Genetic liability to posttraumatic stress disorder and its association with postpartum depression. Psychological Medicine, 53(11), 5052-5059. https://doi.org/10.1017/S0033291722002045
Cheng, Z., Little, M. W., Ferris, C., Takeda, H., Ingvartsen, K. L., Crowe, M. A., Wathes, D. C. & GplusE Consortium (2023). Influence of the concentrate inclusion level in a grass silage-based diet on hepatic transcriptomic profiles in Holstein-Friesian dairy cows in early lactation. Journal of Dairy Science, 106(8), 5805-5824. https://doi.org/10.3168/jds.2022-22860
Tschernoster, N., Erger, F., Kohl, S., Reusch, B., Wenzel, A., Walsh, S., Thiele, H., Becker, C., Franitza, M., Bartram, M. P., Kömhoff, M., Schumacher, L., Kukat, C., Borodina, T., Quedenau, C., Nürnberg, P., Rinschen, M. M., Driller, J. H., Pedersen, B. P. ... Altmüller, J. (2023). Long-read sequencing identifies a common transposition haplotype predisposing for CLCNKB deletions. Genome Medicine, 15(1), Article 62. https://doi.org/10.1186/s13073-023-01215-1
Albiñana, C., Zhu, Z., Schork, A. J., Ingason, A., Aschard, H., Brikell, I., Bulik, C. M., Petersen, L. V., Agerbo, E., Grove, J., Nordentoft, M., Hougaard, D. M., Werge, T., Børglum, A. D., Mortensen, P. B., McGrath, J. J., Neale, B. M., Privé, F. & Vilhjálmsson, B. J. (2023). Multi-PGS enhances polygenic prediction by combining 937 polygenic scores. Nature Communications, 14(1), Article 4702. https://doi.org/10.1038/s41467-023-40330-w
Wollesen, M., Mikkelsen, K., Tvilum, M. S., Vestergaard, M., Wang, M., Meyer, R. L., Ingmer, H., Poulsen, T. & Tørring, T. (2023). Polyether Ionophore Antibiotics Target Drug-Resistant Clinical Isolates, Persister Cells, and Biofilms. Microbiology Spectrum, 11(4), Article e0062523. https://doi.org/10.1128/spectrum.00625-23
Fields, B., Moeskjaer, S., Deakin, W. J., Moffat, E. K., Roulund, N., Andersen, S. U., Young, J. P. W. & Friman, V.-P. (2023). Rhizobium nodule diversity and composition are influenced by clover host selection and local growth conditions. Molecular Ecology, 32(15), 4259-4277. https://doi.org/10.1111/mec.17028
Gram, H., Theologidis, V., Boesen, T. & Jensen, P. H. (2023). Sarkosyl differentially solubilizes patient-derived alpha-synuclein fibril strains. Frontiers in Molecular Biosciences, 10, Article 1177556. https://doi.org/10.3389/fmolb.2023.1177556, https://doi.org/10.3389/fmolb.2023.1177556
Lionikas, A., Hernandez Cordero, A. I., Kilikevicius, A., Carroll, A. M., Bewick, G. S., Bunger, L., Ratkevicius, A., Heisler, L. K., Harboe, M. & Oxvig, C. (2023). Stanniocalcin-2 inhibits skeletal muscle growth and is upregulated in functional overload-induced hypertrophy. Physiological Reports, 11(15), Article e15793. https://doi.org/10.14814/phy2.15793
Khalil, V., Faress, I., Mermet-Joret, N., Kerwin, P., Yonehara, K. & Nabavi, S. (2023). Subcortico-amygdala pathway processes innate and learned threats. eLife, 12, Article e85459. https://doi.org/10.7554/eLife.85459
Hansen, A. S., Jensen, L. S., Gammelgaard, K. R., Ryttersgaard, K. G., Krapp, C., Just, J., Jønsson, K. L., Jensen, P. B., Boesen, T., Johannsen, M., Etzerodt, A., Deleuran, B. W. & Jakobsen, M. R. (2023). T-cell derived extracellular vesicles prime macrophages for improved STING based cancer immunotherapy. Journal of Extracellular Vesicles, 12(8), Article 12350. https://doi.org/10.1002/jev2.12350
Coutant, M. P., Malmkvist, J., Foldager, L. & Herskin, M. S. (2023). The importance of carefully selecting vocalization parameters to quantify pain and stress in piglets. In Book of Abstracts - ISAE 2023: 56th Congress of the International Society for Applied Ethology ISAE 2023 (pp. 68-68).
Andersen-Civil, A. I. S., Sawale, R. A. & Vanwalleghem, G. C. (2023). Zebrafish (Danio rerio) as a translational model for neuro-immune interactions in the enteric nervous system in autism spectrum disorders. Brain, Behavior, and Immunity, 112, 254-266. https://doi.org/10.1016/j.bbi.2023.06.001
Heiland, M., Connolly, N. M. C., Mamad, O., Nguyen, N. T., Kesavan, J. C., Langa, E., Fanning, K., Sanfeliu, A., Yan, Y., Su, J., Venø, M. T., Costard, L. S., Neubert, V., Engel, T., Hill, T. D. M., Freiman, T. M., Mahesh, A., Tiwari, V. K., Rosenow, F. ... Henshall, D. C. (2023). MicroRNA-335-5p suppresses voltage-gated sodium channel expression and may be a target for seizure control. Proceedings of the National Academy of Sciences (PNAS), 120(30), e2216658120. Article e2216658120. https://doi.org/10.1073/pnas.2216658120
Schoenmakers, L. L. J., Yewdall, N. A., Lu, T., André, A. A. M., Nelissen, F. H. T., Spruijt, E. & Huck, W. T. S. (2023). In Vitro Transcription-Translation in an Artificial Biomolecular Condensate. ACS Synthetic Biology, 12(7), 2004-2014. https://doi.org/10.1021/acssynbio.3c00069
Flygaard, R. K., Habeck, M. & Nissen, P. (2023). Technical Comment on “Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling”. Science Advances, 9(28), Article adh0821. https://doi.org/10.1126/sciadv.adh0821
Cullimore, J., Fliegmann, J., Gasciolli, V., Gibelin-Viala, C., Carles, N., Luu, T. B., Girardin, A., Cumener, M., Maillet, F., Pradeau, S., Fort, S., Bono, J. J., Gough, C. & Lefebvre, B. (2023). Evolution of Lipochitooligosaccharide Binding to a LysM-RLK for Nodulation in Medicago truncatula. Plant and Cell Physiology, 64(7), 746-757. https://doi.org/10.1093/pcp/pcad033
Luu, T. B., Carles, N., Bouzou, L., Gibelin-Viala, C., Remblière, C., Gasciolli, V., Bono, J. J., Lefebvre, B., Pauly, N. & Cullimore, J. (2023). Analysis of the structure and function of the LYK cluster of Medicago truncatula A17 and R108. Plant Science, 332, Article 111696. https://doi.org/10.1016/j.plantsci.2023.111696
Borg, K. N., Cheng, G., Shetty, A., Wang, T., Tesauro, C., Knudsen, B. R. & Ho, Y.-P. (2023). An Integrated Platform for the Assessment of Fluorescent Signals in Hydrogel Beads Produced by Droplet Microfluidics. In Proceedings 2023 IEEE 23rd International Conference on Nanotechnology (NANO) (pp. 180-184). IEEE. https://doi.org/10.1109/NANO58406.2023.10231287
Lopes-Rodrigues, V., Boxy, P., Sim, E., Park, D. I., Habeck, M., Carbonell, J., Andersson, A., Fernández-Suárez, D., Nissen, P., Nykjær, A. & Kisiswa, L. (2023). AraC interacts with p75NTR transmembrane domain to induce cell death of mature neurons. Cell Death and Disease, 14(7), Article 440. https://doi.org/10.1038/s41419-023-05979-7
Rouvière, J. O., Salerno-Kochan, A., Lykke-Andersen, S., Garland, W., Dou, Y., Rathore, O., Molska, E. Š., Wu, G., Schmid, M., Bugai, A., Jakobsen, L., Žumer, K., Cramer, P., Andersen, J. S., Conti, E. & Jensen, T. H. (2023). ARS2 instructs early transcription termination-coupled RNA decay by recruiting ZC3H4 to nascent transcripts. Molecular Cell, 83(13), 2240-2257.e6. https://doi.org/10.1016/j.molcel.2023.05.028
Lucotte, E. A., Guðmundsdóttir, V. B., Jensen, J. M., Skov, L., Macià, M. C., Almstrup, K., Schierup, M. H., Helgason, A. & Stefansson, K. (2023). Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions. Nature Communications, 14(1), Article 3990. https://doi.org/10.1038/s41467-023-39644-6
Tolomeo, D., Traversa, D., Venuto, S., Ebbesen, K., Garcia Rodriguez, J. L., Tamma, G., Ranieri, M., Simonetti, G., Ghetti, M., Paganelli, M., Visci, G., Liso, A., Kok, K., Muscarella, L. A., Fabrizio, F. P., Frassanito, M. A., Lamanuzzi, A., Saltarella, I., Solimando, A. G. ... Storlazzi, C. T. (2023). circPVT1 and PVT1/AKT3 show a role in cell proliferation, apoptosis, and tumor subtype-definition in Small Cell Lung Cancer. Genes, Chromosomes & Cancer, 62(7), 377-391. https://doi.org/10.1002/gcc.23121
Sigurdsson, A. I., Louloudis, I., Banasik, K., Westergaard, D., Winther, O., Lund, O., Ostrowski, S. R., Erikstrup, C., Pedersen, O. B. V., Nyegaard, M., Brunak, S., Vilhjálmsson, B. J., Rasmussen, S. & DBDS Genomic Consortium (2023). Deep integrative models for large-scale human genomics. Nucleic Acids Research, 51(12), E67. Article e67. https://doi.org/10.1093/nar/gkad373
Als, T. D., Kurki, M. I., Grove, J., Voloudakis, G., Therrien, K., Tasanko, E., Nielsen, T. T., Naamanka, J., Veerapen, K., Levey, D. F., Bendl, J., Bybjerg-Grauholm, J., Zeng, B., Demontis, D., Rosengren, A., Athanasiadis, G., Bækved-Hansen, M., Qvist, P., Bragi Walters, G. ... Børglum, A. D. (2023). Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses. Nature Medicine, 29(7), 1832-1844. https://doi.org/10.1038/s41591-023-02352-1
Skakkebæk, A., Kjær-Sørensen, K., Matchkov, V. V., Christensen, L. L., Just, J., Cömert, C., Andersen, N. H., Oxvig, C. & Gravholt, C. H. (2023). Dosage of the pseudoautosomal gene SLC25A6 is implicated in QTc interval duration. Scientific Reports, 13(1), Article 12089. https://doi.org/10.1038/s41598-023-38867-3
Osório, C., Watt, A. & Kisiswa, L. (2023). Editorial: Molecular mechanisms and pathways in cerebellar function. Frontiers in Molecular Neuroscience, 16, Article 1258215. https://doi.org/10.3389/fnmol.2023.1258215
Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N. ... Zhang, G. (2023). Eighty million years of rapid evolution of the primate Y chromosome. Nature Ecology & Evolution, 7(7), 1114-1130. https://doi.org/10.1038/s41559-022-01974-x
Slavensky, A. M., Christiansen, M. P. V. & Hammer, B. (2023). Generating candidates in global optimization algorithms using complementary energy landscapes. Journal of Chemical Physics, 159(2), Article 024123. https://doi.org/10.1063/5.0156218
Evans, D. C. S., Khamas, A. B., Marcussen, L., Rasmussen, K. S., Klitgaard, J. K., Kallipolitis, B. H., Nielsen, J., Otzen, D. E., Leake, M. C. & Meyer, R. L. (2023). GFP fusions of Sec-routed extracellular proteins in Staphylococcus aureusreveal surface-associated coagulase in biofilms. Microbial Cell, 10(7), 145-156. https://doi.org/10.15698/mic2023.07.800
Singh, Y., Trautwein, C., Romani, J., Salker, M. S., Neckel, P. H., Fraccaroli, I., Abeditashi, M., Woerner, N., Admard, J., Dhariwal, A., Dueholm, M. K. D., Schäfer, K. H., Lang, F., Otzen, D. E., Lashuel, H. A., Riess, O. & Casadei, N. (2023). Overexpression of human alpha-Synuclein leads to dysregulated microbiome/metabolites with ageing in a rat model of Parkinson disease. Molecular Neurodegeneration, 18(1), Article 44. https://doi.org/10.1186/s13024-023-00628-1
Rolland, T., Cliquet, F., Anney, R. J. L., Moreau, C., Traut, N., Mathieu, A., Huguet, G., Duan, J., Warrier, V., Portalier, S., Dry, L., Leblond, C. S., Douard, E., Amsellem, F., Malesys, S., Maruani, A., Toro, R., Børglum, A. D., Grove, J. ... Bourgeron, T. (2023). Phenotypic effects of genetic variants associated with autism. Nature Medicine, 29(7), 1671-1680. https://doi.org/10.1038/s41591-023-02408-2
Wang, X., Walker, A., Revez, J. A., Ni, G., Adams, M. J., McIntosh, A. M. & Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium (2023). Polygenic risk prediction: why and when out-of-sample prediction R2 can exceed SNP-based heritability. American Journal of Human Genetics, 110(7), 1207-1215. https://doi.org/10.1016/j.ajhg.2023.06.006
Kjeldbjerg Lassen, J., Bradshaw, R., Villesen, P. & Francese, S. (2023). Statistical Modelling Investigation of MALDI-MSI-Based Approaches for Document Examination. Molecules, 28(13), Article 5207. https://doi.org/10.3390/molecules28135207
McRae, E. K. S., Rasmussen, H. Ø., Liu, J., Bøggild, A., Nguyen, M. T. A., Sampedro Vallina, N., Boesen, T., Pedersen, J. S., Ren, G., Geary, C. & Andersen, E. S. (2023). Structure, folding and flexibility of co-transcriptional RNA origami. Nature Nanotechnology, 18(7), 808-817. https://doi.org/10.1038/s41565-023-01321-6
Martens, A. K., Erwig, M., Patzig, J., Fledrich, R., Füchtbauer, E. M. & Werner, H. B. (2023). Targeted inactivation of the Septin2 and Septin9 genes in myelinating Schwann cells of mice. Cytoskeleton, 80(7-8), 290-302. https://doi.org/10.1002/cm.21736
Oxvig, C. & Conover, C. A. (2023). The Stanniocalcin-PAPP-A-IGFBP-IGF Axis. Journal of Clinical Endocrinology and Metabolism, 108(7), 1624-1633. https://doi.org/10.1210/clinem/dgad053
Dalskov, L., Gad, H. H. & Hartmann, R. (2023). Viral recognition and the antiviral interferon response. EMBO Journal, 42(14), Article e112907. https://doi.org/10.15252/embj.2022112907
Sønderby, T. V., Louros, N. N., Khodaparast, L., Khodaparast, L., Madsen, D. J., Olsen, W. P., Moonen, N., Nagaraj, M., Sereikaite, V., Strømgaard, K., Rousseau, F., Schymkowitz, J. & Otzen, D. E. (2023). Sequence-targeted Peptides Divert Functional Bacterial Amyloid Towards Destabilized Aggregates and Reduce Biofilm Formation. Journal of Molecular Biology, 435(11), 168039. Article 168039. https://doi.org/10.1016/j.jmb.2023.168039
Seeler, S., Andersen, M. S., Sztanka-Toth, T., Rybiczka-Tešulov, M., van den Munkhof, M. H., Chang, C. C., Maimaitili, M., Venø, M. T., Hansen, T. B., Pasterkamp, R. J., Rybak-Wolf, A., Denham, M., Rajewsky, N., Kristensen, L. S. & Kjems, J. (2023). A Circular RNA Expressed from the FAT3 Locus Regulates Neural Development. Molecular Neurobiology, 60(6), 3239–3260. https://doi.org/10.1007/s12035-023-03253-7
Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A. ... Bonet, T. M. (2023). A global catalog of whole-genome diversity from 233 primate species. Science, 380(6648), 906-913. https://doi.org/10.1126/science.abn7829
Sun, C. & Schuman, E. (2023). A multi-omics view of neuronal subcellular protein synthesis. Current Opinion in Neurobiology, 80, Article 102705. https://doi.org/10.1016/j.conb.2023.102705
Omelková, M., Fenger, C. D., Murray, M., Hammer, T. B., Pravata, V. M., Bartual, S. G., Czajewski, I., Bayat, A., Ferenbach, A. T., Stavridis, M. P. & van Aalten, D. M. F. (2023). An O-GlcNAc transferase pathogenic variant linked to intellectual disability affects pluripotent stem cell self-renewal. DMM Disease Models and Mechanisms, 16(6), Article dmm049132. https://doi.org/10.1242/dmm.049132
Catapano, C., Rahm, J. V., Omer, M., Teodori, L., Kjems, J., Dietz, M. S. & Heilemann, M. (2023). Biased activation of the receptor tyrosine kinase HER2. Cellular and Molecular Life Sciences, 80(6), Article 158. https://doi.org/10.1007/s00018-023-04806-8

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Lisbeth Heilesen