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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 4751 to 136 out of 136

Peer-reviewed publications at MBG - all years

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Cosin-Sales, J., Christiansen, M., Kaminski, P., Oxvig, C., Overgaard, M. T., Cole, D., Holt, D. W. & Kaski, J. C. (2004). Pregnancy associated plasma protein A (PAPP-A) and its endogenous inhibitor, the proform of eosinophil major basic protein (proMBP) are related to complex stenosis morphology in patients with stable angina. Circulation, 109, 1724172-1724178.

Kalli, K. R., Chen, B.-K., Bale, L. K., Gernand, E., Overgaard, M. T., Oxvig, C., Cliby, W. A. & Conover, C. A. (2004). Pregnancy-associated plasma protein-A (PAPP-A) expression and insulin-like growth factor binding protein-4 protease activity in normal and malignant ovarian surface epithelial cells. International Journal of Cancer, 110, 633-640.

N., G., Delpuech, T., Oxvig, C., Overgaard, M. T. & Monget, P. (2004). Proteolytic degradation of IGF-binding protein (IGFBP)-2 in equine ovarian follicles: involvement of pregnancy-associated plasma protein-A (PAPP-A) and association with dominant but not subordinated follicles. J. Endocrinol., 182, 457-466.

Bowler, R. P., Duda, B., Chan, E. D., Enghild, J. J., Ware, L. B., Matthay, M. A. & Duncan, M. W. (2004). Proteomic analysis of pulmonary edema fluid and plasma in patients with acute lung injury. American Journal of Physiology: Lung Cellular and Molecular Physiology, 286(6), 1095-1104.

Karring, H., Thøgersen, I. B., Klintworth, G. K., Enghild, J. J. & Møller-Pedersen, T. (2004). Proteomic analysis of the soluble fraction from human corneal fibroblasts with reference to ocular transparency. Mol. Cell. Proteomics, 3(7), 660-674.

Hanford, L. E., Enghild, J. J., Valnickova, Z., Petersen, S. V., Schaefer, L. M., Schaefer, T. M., Reinhart, T. A. & Oury, T. D. (2004). Purification and characterization of mouse soluble receptor for advanced glycation end products (sRAGE). Journal of Biological Chemistry, 279(48), 50019-50024.

Andersen, C. F., Anand, M., Boesen, T., Van, L. B., Kinzy, T. G. & Andersen, G. R. (2004). Purification and crystallization of the yeast translation elongation factor eEF3. Acta Crystallographica Section D: Biological Crystallography, 60(Pt 7), 1304-1307. https://doi.org/10.1107/S0907444904010716

Andersen, R. B., Karring, H., Møller-Pedersen, T., Valnickova, Z., Thøgersen, I. B., Hedegaard, C. J., Kristensen, T., Klintworth, G. K. & Enghild, J. J. (2004). Purification and structural characterization of transforming growth factor beta induced protein (TGFBIp) from porcine and human corneas. Biochemistry, 43(51), 16374-16384.

Mailund, T. & Pedersen, C. N. S. (2004). QDist - Quartet Distance between Evolutionary Trees. Bioinformatics, 20(10), 1636-1637.

Mailund & Pedersen, C. N. S. (2004). QDist—Quartet Distance Between Evolutionary Trees. Bioinformatics, 20(10), 1636-1637.

Mailund, T. & Pedersen, C. N. S. (2004). QuickJoin - Fast Neighbour-Joining Tree Reconstruction. Bioinformatics, 20(17), 3261-3262.

Mailund & Pedersen, C. N. S. (2004). QuickJoin—Fast Neighbour-Joining Tree Reconstruction. Bioinformatics, 20(17), 3261-3262.

Karring, H., Mathu, S. G. J., van Duin, J., Clark, B. F. C., Kraal, B. & Knudsen, C. R. (2004). Qβ-Phage resistance by deletion of the coiled-coil motif in elongation factor Ts. Journal of Biological Chemistry, 279, 1878-1884.

Besenbacher, S., Mailund, T., Westh-Nielsen, L. & Pedersen, C. N. S. (2004). RBT - A Tool for Building Refined Buneman Trees. Bioinformatics, 21(8), 1711-1712.

Frøhlich, R. F., Andersen, F. F., Westergaard, O., Andersen, A. H. & Knudsen, B. R. (2004). Regions within the N-terminal domain of human topoisomerase I exert important functions during strand rotation and DNA binding. Journal of Molecular Biology, 336, 93-103.

Fowlkes, J. L., Serra, D. M., Bunn, R. C., Thrailkill, K. M., Enghild, J. J. & Nagase, H. (2004). Regulation of insulin-like growth factor (IGF)-I action by matrix metalloproteinase-3 involves selective disruption of IGF-I/IGF-binding protein-3 complexes. Endokrinologiya, 145(2), 620-626.

Andersen, E. S., Contera, S., Knudsen, B., Damgaard, C. K., Besenbacher, F. & Kjems, J. (2004). Role of the TAR hairpin in dimerization of HIV-1 RNA. Journal of Biological Chemistry, 279, 22243-22249.

Zahler, A. M., Damgaard, C. K., Kjems, J. & Caputi, M. (2004). SC35 and hnRNPs A/B binding to a juxtaposed ESE/ESS element regulates HIV-1 tat exon 2 splicing. Journal of Biological Chemistry, 279, 10077-10084.

Christiansen, M., Larsen, S. O., Oxvig, C., Qin, Q.-P., Wagner, J. M., Overgaard, M. T., Gleich, G. J., Sottrup-Jensen, L. & Nørgaard-Pedersen, B. (2004). Screening for Down's syndrome in early and late first and second trimester using six maternal serum markers. Clin. Genet., 65, 11-16.

Rattan, S. I. S., Gonzalez-Dosal, R., Nielsen, E. R., Kraft, D. C., Weibel, J. & Kahns, S. (2004). Slowing down aging from within: mechanistic aspects of anti-aging hormetic effects of mild heat stress on human cells. Acta Biochimica Polonica, 51(2), 481-92.

Martensen, P. M. & Justesen, J. (2004). Small ISGs coming forward. Journal of Interferon & Cytokine Research, 24, 1-19.

Boesen, T., Mohammad, S. S., Pavitt, G. D. & Andersen, G. R. (2004). Structure of the catalytic fragment of translation initiation factor 2B and identification of a critically important catalytic residue. Journal of Biological Chemistry, 279, 10584-10592.

Bøttger, P. & Pedersen, L. (2004). The central half of Pit2 is not required for its function as a retroviral receptor. J. Virol., 78, 9564-9567.

Rafnar, T., Thorlacius, S., Steingrimsson, E., Schierup, M. H., Madsen, J. N., Calian, V., Eldon, B. J., Jonsson, T., Hein, J. & Thorgeirsson, S. S. (2004). The Icelandic Cancer Project--a population-wide approach to studying cancer. Nat Rev Cancer Jun, 4(6), 488-492.

Olsen, D. A., Petersen, S. V., Oury, T. D., Valnickova, Z., Thøgersen, I. B., Kristensen, T., Bowler, R. P., Crapo, J. D. & Enghild, J. J. (2004). The intracellular proteolytic processing of extracellular superoxide dismutase (EC-SOD) is a two-step event. Journal of Biological Chemistry, 279, 22151-22157.

Petersen, S. V., Due, A. V., Valnickova, Z., Oury, T. D., Crapo, J. D. & Enghild, J. J. (2004). The structure of rabbit extracellular superoxide dismutase differs from the human protein. Biochemistry, 43(44), 14275-14281.

Østergaard, V. H., Bjergbæk, L., Skouboe, C., Giangiacomo, L., Knudsen, B. R. & Andersen, A. H. (2004). The tranducer domain is important for clamp operation in human DNA topoisomerase II alpha. Journal of Biological Chemistry, 279, 1684-1691.

Hornik, C., Beate Brand-Saberi, B., Stefan Rudloff, S., Christ, B. & Füchtbauer, E.-M. (2004). Twist is an integrator of SHH, FGF, and BMP signaling. Anatomy and Embryology, 209, 31-39.

Bechsgaard, J., Bataillon, T. & Schierup, M. H. (2004). Uneven segregation of sporophytic self-incompatibility alleles in arabidopsis lyrata. Journal of Evolutionary Biology, 17(3), 554-561.

Bechsgaard, J., Bataillon, T. & Schierup, M. H. (2004). Uneven segregation of sporophytic self-incompatibility alleles in Arabidopsis lyrata. J. Evol. Biol., 17, 554-561.

Freund, M., Asang, C., Kammler, S., Konermann, C., Krummheuer, J., Hipp, M., Meyer, I., Gierling, W., Theiss, S., Preuss, T., Schindler, D., Kjems, J. & Schaal, H. (2003). A novel approach to describe a U1 snRNA binding site. Nucleic Acids Research, 31(23), 6963-6975. https://doi.org/10.1093/nar/gkg901

Vega Robles, M. C., Lorentzen, E., Linden, A. & Wilmanns, M. (2003). Evolutionary markers in the (beta/alpha)8-barrel fold. Current Opinion in Chemical Biology, 7(6), 694-701.

Glémin, S., Ronfort, J. & Bataillon, T. (2003). Patterns of inbreeding depression and architecture of the load in subdivided populations. Genetics, 165(4), 2193-212.

Aachmann, F. L., Otzen, D. E., Larsen, K. L. & Wimmer, R. (2003). Structural background of cyclodextrin-protein interactions. Protein Engineering, 16(12), 905-912.

Lorentzen, E., Pohl, E., Zwart, P., Stark, E. A., Russell, R. B., Knura, T., Hensel, R. & Siebers, B. (2003). Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins. J. Biol. Chem., 278(47), 47253-47260.

Kadarmideen, H. N. & Wegmann, S. (2003). Genetic parameters for body condition score and its relationship with type and production traits in Swiss Holsteins. Journal of Dairy Science, 86(11), 3685-3693. https://doi.org/10.3168/jds.S0022-0302(03)73974-5

Thomsen, R., Libri, D., Boulay, J., Rosbash, M. & Jensen, T. H. (2003). Localization of nuclear retained mRNAs in Saccharomyces cerevisiae. RNA, 9, 1049-1057. https://doi.org/10.1261/rna.5170303

Sørensen, E. S., Møller, L., Vinther, M., Petersen, T. E. & Rasmussen, L. K. (2003). The phosphorylation pattern of human α_s1-casein is markedly different from the ruminant species. European Journal of Biochemistry, 270(17), 3651-3655. https://doi.org/10.1046/j.1432-1033.2003.03755.x

Smidt, K., Hansen, L. L., Søgaard, T. M. M., Petersen, L. K., Knudsen, U. B. & Martensen, P. M. (2003). A nine-nucleotide deletion and splice variation in the coding region of the interferon induced ISG12 gene. BBA General Subjects, 1636(3), 227-234. https://doi.org/10.1016/S0925-4439(03)00087-5

Smidt, K. C. J., Hansen, L. L., Søgaard, T. M. M., Petersen, L. K., Knudsen, U. B. & Martensen, P. M. (2003). A nine-nucleotide deletion and splice variation in the coding region of the interferon induced ISG12 gene. B B A - Molecular Basis of Disease, 1638(3), 227-34.

Hercus, M. J., Loeschcke, V. & Rattan, S. I. S. (2003). Lifespan extension of Drosophila melanogaster through hormesis by repeated mild heat stress. Biogerontology, 4(3), 149-156. https://doi.org/10.1023/A:1024197806855

Bataillon, T. (2003). Shaking the 'deleterious mutations' dogma? Trends in Ecology and Evolution, 18(7), 315-317. https://doi.org/10.1016/S0169-5347(03)00128-9

Melo, E. P., Chen, L. Y., Cabral, J. M. S., Fojan, P., Petersen, S. B. & Otzen, D. E. (2003). Trehalose favors a cutinase compact intermediate off-folding pathway. Biochemistry, 42(24), 7611-7617. https://doi.org/10.1021/bi034267x

Kadarmideen, H. N., Thompson, R., Coffey, M. P. & Kossaibati, M. A. (2003). Genetic parameters and evaluations from single- and multiple-trait analysis of dairy cow fertility and milk production. Livestock Production Science, 81(2-3), 183-195. https://doi.org/10.1016/S0301-6226(02)00274-9

Aaboe, M., Offersen, B. V., Christensen, A. & Andreasen, P. (2003). Vitronectin in human breast carcinomas. B B A - Molecular Basis of Disease, 1638(1), 72-82. https://doi.org/10.1016/S0925-4439(03)00059-0

Otzen, D. E., Oliveberg, M. & Höök, F. (2003). Adsorption of a small protein to a methyl-terminated hydrophobic surfaces: Effect of protein-folding thermodynamics and kinetics. Colloids and Surfaces B: Biointerfaces, 29(1), 67-73. https://doi.org/10.1016/S0927-7765(02)00186-8

Madsen, L. H., Collins, N. C., Rakwalska, M., Backes, G., Sandal, N., Krusell, L., Jensen, J., Waterman, E. H., Jahoor, A., Ayliffe, M., Pryor, A. J., Langridge, P., Schulze-Lefert, P. & Stougaard, J. (2003). Barley disease resistance gene analogs of the NBS-LRR class: Identification and mapping. Molecular Genetics and Genomics, 269(1), 150-161. https://doi.org/10.1007/s00438-003-0823-5

Kadarmideen, H. (2003). Recording disease and reproductive events in dairy cattle for developing national health and fertility selection indices: in Book: Performance Recording of Animals State Of The Art, 2002: Proceedings of the 33rd Biennial Session of ICAR, Interlaken, Switzerland. Editors : Joseph Crettenand, Juerg Moll, Cesare Mosconi and Silvia Wegmann. Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-511-6

Rappsilber, J., Moniatte, M., Nielsen, M. L., Podtelejnikov, A. V. & Mann, M. (2003). Experiences and perspectives of MALDI MS and MS/MS in proteomic research. International Journal of Mass Spectrometry, 226(1), 223-237. https://doi.org/10.1016/S1387-3806(02)00976-4

Husted, L. B., Sørensen, E. S. & Sottrup-Jensen, L. (2003). 4-(Aminosulfonyl)-7-fluoro-2,1,3-benzoxadiazole is not specific for labeling of sulfhydryl groups in proteins as it may also react with phenolic hydroxyl groups and amino groups. Analytical Biochemistry, 314(1), 166-168. https://doi.org/10.1016/S0003-2697(02)00650-4

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Lisbeth Heilesen