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Latest peer-reviewed publications at MBG

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Displaying results 4151 to 62 out of 62

Peer-reviewed publications at MBG - all years

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Nielsen, M. J., Petersen, S. V., Jacobsen, C., Thirup, S. S., Enghild, J. J., Graversen, J. H. & Moestrup, S. K. (2007). A unique loop extension in the serine protease domain of haptoglobin is essential for CD163 recognition of the haptoglobin-hemoglobin complex. Journal of Biological Chemistry, 282(2), 1072-1079.

Christensen, B., Kazanecki, C. C., Petersen, T. E., Rittling, S. R., Denhardt, D. T. & Sørensen, E. S. (2007). Cell-type specific post-translational modifications of mouse osteopontin are associated with different adhesive properties. Journal of Biological Chemistry, 282, 19463-19472.

Dalsgaard, T. K., Otzen, D., Nielsen, J. H. & Larsen, L. B. (2007). Changes in structures of milk proteins upon photo-oxidation. J. Agr. Food Chem., (55), 10968-10976.

Pallesen, L. T., Pedersen, L. R. L., Petersen, T. E. & Rasmussen, J. T. (2007). Characterization of carbohydrate structures of bovine MUC15 and distribution of the mucin in bovine milk. Journal of Dairy Science, 90(7), 3143-3152.

Liu, X., Howard, K. A., Dong, M. & Kjems, J. (2007). Chitosan/siRNA nanoparticles for gene silencing: formulation and characterization. Biomaterials, 28, 1280-1288.

Imam, S. Z., Indig, F. E., Cheng, W. H., Saxena, S. P., Stevnsner, T. V., Kufe, T. & Bohr, V. (2007). Cockayne syndrome protein B interacts with and is phosphorylated by c-Abl tyrosine kinase. Nucleis Acid Res., 35, 4941-4951.

Stissing, M., Mailund, T., Pedersen, C. N. S., Brodal, G. S. & Fagerberg, R. (2007). Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees. In Proceedings of the 5th Asia-Pacific Bioinformatics Conference (APBC) (pp. 91-100)

Stissing, M., Pedersen, C. N. S., Mailund, T. & Brodal, G. S. (2007). Computing the Quartet Distance between Evolutionary Trees of Bounded Degree. In Proceedings of the 5th Asia-Pacific Bioinformatics Conference (APBC) (pp. 101-110)

Pedersen, B. P., Buch-Pedersen, M. J., Morth, J. P., Palmgren, M. G. & Nissen, P. (2007). Crystal structure of the plasma membrane proton pump. Nature, 450(7172), 1111-1114. https://doi.org/10.1038/nature06417

Morth, J. P., Pedersen, B. P., Toustrup-Jensen, M. S., Sørensen, T. L.-M., Petersen, J., Andersen, J. P., Vilsen, B. & Nissen, P. (2007). Crystal structure of the sodium-potassium pump. Nature, 450(7172), 1043-1049. https://doi.org/10.1038/nature06419

Heegaard, P. M. P., Boas, U. & Otzen, D. (2007). Dendrimer effects on peptide and protein fibrillation. Macromolecular Bioscience, (7), 1047-1059.

Buitenhuis, A. J., Lund, M. S., Thomasen, J. R., Thomsen, B., Nielsen, V. H., Bendixen, C. & Guldbrandtsen, B. (2007). Detection of Quantitative Trait Loci Affecting Lameness and Leg Conformation Traits in Danish Holstein Cattle. Journal of Dairy Science, 90(1), 472-481. http://jds.fass.org/cgi/content/abstract/90/1/472?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&searchid=1&FIRSTINDEX=0&sortspec=relevance&volume=90&firstpage=472&resourcetype=HWCIT

Lizotte, P., Hanford, LE., Enghild, J. J., Nozik-Grayck, E., Giles, BL. & Oury, TD. (2007). Developmental expression of the receptor for advanced glycation end-products (RAGE) and its response to hyperoxia in the neonatal rat lung. BMC Developmental Biology, 7(15).

Xu, S., Dong, M., Liu, X., Howard, K. A., Kjems, J. & Besenbacher, F. (2007). Direct force measurements between siRNA and chitosan molecules using force spectroscopy. Biophysical Journal, 93(3), 952-9. https://doi.org/10.1529/biophysj.106.093229

Stark, A., Lin, M. F., Kheradpour, P., Pedersen, J. S., Parts, L., Carlson, J. W., Crosby, M. A., Rasmussen, M. D., Roy, S., Deoras, A. N., Ruby, J. G., Brennecke, J., Hodges, E., Hinrichs, A. S., Caspi, A., Paten, B., Park, S.-W., Han, M. V., Maeder, M. L. ... Harvard FlyBase curators (2007). Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature, 450(7167), 219-32. https://doi.org/10.1038/nature06340

Jensen, T. H. (2007). Dissecting mechanisms of mRNA surveillance in THO/sub2 complex mutants. EMBO Journal, 26(9), 2317-2326.

Rougemaille, M., Gudipati, R. K., Olesen, J. R., Thomsen, R., Seraphin, B., Libri, D. & Jensen, T. H. (2007). Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants: mRNA surveillance in THO/sub2 mutants. EMBO Journal, 26(9), 2317-2326.

Ohlson, J., Pedersen, J. S., Haussler, D. & Ohman, M. (2007). Editing modifies the GABA(A) receptor subunit alpha3. RNA, 13(5), 698-703. https://doi.org/10.1261/rna.349107

Jakobsen, M. R., Haasnoot, J., Wengel, J., Berkhout, B. & Kjems, J. (2007). Efficient inhibition of HIV-1 expression by LNA modified antisense oligonucleotides and DNAzymes targeted to functionally selected binding sites. Retrovirology, 4(29), 1-13. https://doi.org/10.1186/1742-4690-4-29

Karring, H., Valnickova, Z., Thøgersen, I. B., Hedegaard, C. J., Møller-Pedersen, T., Kristensen, T., Klintworth, G. K. & Enghild, J. J. (2007). Evidence against a blood derived origin for transforming growth factor beta induced protein in corneal disorders caused by mutations in the TGFBI gene. Molecular Vision, 13, 997-1004.

Karring, H., Valnickova, Z., Thøgersen, I., Hedegaard, CJ., Møller-Pedersen, T., Kristensen, T., Klintworth, GK. & Enghild, J. J. (2007). Evidence against a blood derived origin for transforming growth factor beta induced protein in corneal disorders caused by mutations in the TGFBI gene. Molecular Vision.

Clark, A. G., Eisen, M. B., Smith, D. R., Bergman, C. M., Oliver, B., Markow, T. A., Kaufman, T. C., Kellis, M., Gelbart, W., Iyer, V. N., Pollard, D. A., Sackton, T. B., Larracuente, A. M., Singh, N. D., Abad, J. P., Abt, D. N., Adryan, B., Aguade, M., Akashi, H. ... Drosophila 12 Genomes Consortium (2007). Evolution of genes and genomes on the Drosophila phylogeny. Nature, 450(7167), 203-18. https://doi.org/10.1038/nature06341

Mailund, T., Pedersen, C. N. S., Bardino, J., Vinter, B. & Karlsen, H. (2007). Experiences with GeneRecon on MiG. Future Generation Computer Systems - The International Journal of eScience, 23, 580-586. https://doi.org/10.1016/j.future.2006.09.003

Lien, C. F., Hazai, D., Tan, J., Füchtbauer, E.-M., Jancsik, V. & Gorecki, DC. (2007). Expression of alpha-dystrobrevin in blood-tissue barriers: sub-cellular localisation and molecular characterisation in normal and dystrophic mice. Cell and Tissue Research, 327(1), 67-82.

Laska, M. J., Strandbygård, D. J., Kjeldgaard, A., Mains, M., Corydon, T. J., Memon, A. A., Sørensen, B. S., Vogel, U., Jensen, U. B. & Nexø, B. A. (2007). Expression of the RAI gene is conducive to apoptosis: studies of induction and interference. Experimental Cell Research, 313(12), 2611-21. https://doi.org/10.1016/j.yexcr.2007.05.006

Villesen, P. (2007). FaBox: an online toolbox for FASTA sequences. Molecular Ecology Resources. https://doi.org/10.1111/j.1471-8286.2007.01821.x

Andersen, P. K., Veng, L., Juul-Madsen, H. R., Vingborg, R., Bendixen, C. & Thomsen, B. (2007). Gene expression profiling, chromosome assignment and mutational analysis of the porcine Golgi-resident UDP-N-Acetylglucosamine transporter SLC35A3. Molecular Membrane Biology, 24(5), 519-530. https://doi.org/10.1080/09687680701459877

Singh, R., Kølvraa, S. & Rattan, S. (2007). Genetics of longevity with emphasis on the relevance of HSP70 genes. Frontiers in Bioscience, 12, 4504-4513.

Fredsted, T., Schierup, M. H., Groenevald, L. F. & Kappeler, P. M. (2007). Genetic structure, lack of sex-biased dispersal and behavioral flexibility in the pair-living fat-tailed dwarf lemur, Cheirogaleus medius. Behavioral Ecology and Sociobiology. https://doi.org/10.1007/s00265-006-0323-9

Hobolth, A., Christensen, O. F., Mailund, T. & Schierup, M. H. (2007). Genomic relationships and speciation times of human, chimpanzee and gorilla inferred from a coalescent hidden Markov model. PLoS Genetics, 3(2). https://doi.org/10.1371/journal.pgen.0030007

Sejersen, H. & Rattan, S. (2007). Glyoxal-induced premature senescence in human skin fibroblasts. New York Academy of Sciences. Annals, 1100, 518-523.

Haudry, A., Cenci, A., Ravel, C., Bataillon, T., Brunel, D., Poncet, C., Hochu, I., Poirier, S., Santoni, S., Glemin, S. & David, J. (2007). Grinding up Wheat: a Massive Loss of Nucleotide Diversity Since Domestication. Molecular Biology and Evolution, 24(7), 1506-1517. https://doi.org/10.1093/molbev/msm077

Valnickova, Z., Petersen, S. V., Nielsen, SB., Otzen, D. & Enghild, J. J. (2007). Heparin binding induces a conformational change of pigment epithelium-derived factor (PEDF). Journal of Biological Chemistry.

Jørgensen, F. G., Schierup, M. H. & Clark, A. G. (2007). Heterogeneity in Regional GC Content and Differential Usage of Codons and Amino Acids in GC-Poor and GC-Rich Regions of the Genome of Apis mellifera. Molecular Biology and Evolution, 24(2), 611-619. https://doi.org/10.1093/molbev/msl190

Rattan, S. (2007). Homeostasis, homeodynamics, and aging. In Encyclopedia of Gerontology (pp. 696-699). Elsevier Inc., UK.

Rattan, S. & Ali, R. (2007). Hormetic prevention of molecular damage during cellular aging of human skin fibroblasts and keratinocytes. New York Academy of Sciences. Annals, 1100, 424-430.

Birney, E., Stamatoyannopoulos, J. A., Dutta, A., Guigó, R., Gingeras, T. R., Margulies, E. H., Weng, Z., Snyder, M., Dermitzakis, E. T., Thurman, R. E., Kuehn, M. S., Taylor, C. M., Neph, S., Koch, C. M., Asthana, S., Malhotra, A., Adzhubei, I., Greenbaum, J. A., Andrews, R. M. ... ENCODE Project Consortium (2007). Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature, 447(7146), 799-816. https://doi.org/10.1038/nature05874

Blechingberg, J., Holm, I. E., Nielsen, K. B., Jensen, T. H., Jørgensen, A. L. & Nielsen, A. L. (2007). Identification and characterization of GFAPK, a novel glial fibrillary acidic protein isoform. Glia, 55(5), 497-507.

Bramsen, J. B., Laursen, M. B., Damgaard, C. K., Lena, S. W., Babu, B. R., Wengel, J. & Kjems, J. (2007). Improved silencing properties using small internally segmented interfering RNAs. Nucleic Acids Research, 35(17), 5886-5897. https://doi.org/10.1093/nar/gkm548

Ehlers, B. & Bataillon, T. (2007). ‘Inconstant males' and the maintenance of labilesex expression in subdioecious plants. New Phytologist. https://doi.org/10.1111/j.1469-8137.2007.01975.x

Ehlers, B. & Bataillon, T. (2007). 'Inconstant males' and the maintenance of labile sex expression in subdioecious plants. New Phytologist, 174, 194-211.

Sironen, A., Vilkki, J., Bendixen, C. & Thomsen, B. (2007). Infertile Finnish Yorkshire boars carry a full-length LINE-1 retrotransposon within the KPL2 gene. Molecular Genetics and Genomics, 278(4), 385-391. https://doi.org/10.1007/s00438-007-0256-7

Abad, M., Menéndez, C., Füchtbauer, A. C., Serrano, M., Füchtbauer, E.-M. & Palmero, I. (2007). Ing1 mediates p53 accumulation and chromatin modification in respones to oncogenic stress. Journal of Biological Chemistry, 282(42), 31060-31067.

Bojsen, A., Buesa, J., Montava, R., Kvistgaard, A. S., Kongsbak, M. B., Petersen, T. E., Heegaard, C. W. & Rasmussen, J. T. (2007). Inhibitory Activities of Bovine Macromolecular Whey Proteins on Rotavirus Infections In Vitro and In Vivo. Journal of Dairy Science, 90, 66-74.

Thaysen-Andersen M, M., Thøgersen, I., Lademann, U., Offenberg, H., Giessing, AM., Enghild, J. J., Nielsen, HJ., Brünner, N. & Højrup P., P. (2007). Investigating the biomarker potential of glycoproteins using comparative glycoprofiling - application to tissue inhibitor of metalloproteinases-1. Biochim. Biophys. Acta.

De Mita, S., Ronfort, J., McKhann, H. I., Poncet, C., El Malki, R. & Bataillon, T. (2007). Investigation of the demographic and selective forces shaping the nucleotide diversity of genes involved in nod factor signaling in Medicago truncatula. Genetics, 177(4), 2123-33. https://doi.org/10.1534/genetics.107.076943

Lund, M. S., Sahana, G., Andersson-Eklund, L., Hastings, N., Fernandez, A., Schulman, N., Thomsen, B., Viitala, S., Williams, J. L., Sabry, A., Viinalass, H. & Vilkki, J. (2007). Joint Analysis of Quantitative Trait Loci for Clinical Mastitis and Somatic Cell Score on Five Chromosomes in Three Nordic Dairy Cattle Breeds. Journal of Dairy Science, 90, 5282-5290. https://doi.org/10.3168/jds.2007-0177

Gromadski, K. B., Schümmer, T., Strømgaard, A., Knudsen, C. R., Kinzy, T. G. & Rodnina, M. V. (2007). Kinetics of the interactions between yeast elongation factors 1A and 1Balpha, guanine nucleotides, and aminoacyl-tRNA. Journal of Biological Chemistry, 282(49), 35629-37. https://doi.org/10.1074/jbc.M707245200