Borg, K. N., Shetty, A., Cheng, G., Zhu, S., Wang, T., Yuan, W., Ho, H. P., Knudsen, B. R., Tesauro, C. & Ho, Y. P. (2024). Hydrogel bead-based isothermal detection (BEAD-ID) for assessing the activity of DNA-modifying enzymes. iScience, 27(12), Article 111332. https://doi.org/10.1016/j.isci.2024.111332

Borg, K. N., Shetty, A., Cheng, G., Zhu, S., Wang, T., Ho, H. P., Knudsen, B. R., Tesauro, C. & Ho, Y.-P. (2024). Hydrogel bead-based isothermal detection (BEAD-ID) for assessing the activity of DNA-modifying enzymes. iScience, 27(12), Article 111332. https://doi.org/10.1016/j.isci.2024.111332

Paiva, P., Teixeira, L. M. C., Wei, R., Liu, W., Weber, G., Morth, J. P., Westh, P., Petersen, A. R., Johansen, M. B., Sommerfeldt, A., Sandahl, A., Otzen, D. E., Fernandes, P. A. & Ramos, M. J. (2024). Unveiling the enzymatic pathway of UMG-SP2 urethanase: insights into polyurethane degradation at the atomic level. Chemical Science, 16(5), 2437-2452. https://doi.org/10.1039/d4sc06688j

Korhonen, S., Stenberg, K., Seemab, U., Bartos, P., Mäkiniemi, K., Kjems, J., Dupont, D. M. & Subrizi, A. (2024). Targeting ocular tissues with intravenously administered aptamers selected by in vivo SELEX. Molecular Therapy Nucleic Acids, 35(4), Article 102352. https://doi.org/10.1016/j.omtn.2024.102352

Pedersen, E. M., Wimberley, T. & Vilhjálmsson, B. J. (2024). A cautionary tale for Alzheimer’s disease GWAS by proxy: Genetic epidemiology. Nature Genetics, 56(12), 2590-2591. Article 99. https://doi.org/10.1038/s41588-024-02023-y

Breinbjerg, A., Jørgensen, C. S., Walters, G. B., Grove, J., Als, T. D., Kamperis, K., Stéfansdóttir, L., Thirstrup, J. P., Borg, B., Albiñana, C., Vilhjálmsson, B. J., Eðvarðsson, V. Ö., Stefánsson, H., Mortensen, P. B., Agerbo, E., Werge, T., Børglum, A., Demontis, D., Stefánsson, K. ... Christensen, J. H. (2024). Exploring the Genetic Risk of Childhood Daytime Urinary Incontinence: A Genome-Wide Association Study. The Journal of Urology, 212(6), 851-861. https://doi.org/10.1097/JU.0000000000004187

Yamamoto, S., Nakamura, H., Kawamura, Y. K., Kitazawa, T., Kimura, M. & Kitazawa, Y. (2024). Alkoxy Substituted Brominated closo-Dodecaborates with Functionalized Aliphatic Spacers. Chemistry (Switzerland), 6(6), 1635-1644. https://doi.org/10.3390/chemistry6060099

Montalbano, S., Krebs, M. D., Rosengren, A., Vaez, M., Hellberg, K. L. G., Mortensen, P. B., Børglum, A. D., Geschwind, D. H., Raznahan, A., Thompson, W. K., Helenius, D., Werge, T., Ingason, A. & iPSYCH Investigators (2024). Analysis of exonic deletions in a large population study provides novel insights into NRXN1 pathology. npj Genomic Medicine, 9(1), Article 67. https://doi.org/10.1038/s41525-024-00450-8

Vieira de Sá, R., Sudria-Lopez, E., Cañizares Luna, M., Harschnitz, O., van den Heuvel, D. M. A., Kling, S., Vonk, D., Westeneng, H. J., Karst, H., Bloemenkamp, L., Varderidou-Minasian, S., Schlegel, D. K., Mars, M., Broekhoven, M. H., van Kronenburg, N. C. H., Adolfs, Y., Vangoor, V. R., de Jongh, R., Ljubikj, T. ... Pasterkamp, R. J. (2024). ATAXIN-2 intermediate-length polyglutamine expansions elicit ALS-associated metabolic and immune phenotypes. Nature Communications, 15(1), Article 7484. https://doi.org/10.1038/s41467-024-51676-0

Nielsen, I. H., Rovsing, A. B., Janns, J. H., Thomsen, E. A., Ruzo, A., Bøggild, A., Nedergaard, F., Møller, C. T., Boesen, T., Degn, S. E., Shah, J. V. & Mikkelsen, J. G. (2024). Cell-targeted gene modification by delivery of CRISPR-Cas9 ribonucleoprotein complexes in pseudotyped lentivirus-derived nanoparticles. Molecular Therapy Nucleic Acids, 35(4), Article 102318. https://doi.org/10.1016/j.omtn.2024.102318

Rybiczka-Tešulov, M., Garritsen, O., Venø, M. T., Wieg, L., Dijk, R. V., Rahimi, K., Gomes-Duarte, A., Wit, M. D., van de Haar, L. L., Michels, L., van Kronenburg, N. C. H., van der Meer, C., Kjems, J., Vangoor, V. R. & Pasterkamp, R. J. (2024). Circular RNAs regulate neuron size and migration of midbrain dopamine neurons during development. Nature Communications, 15(1), Article 6773. https://doi.org/10.1038/s41467-024-51041-1

Vangoor, V. R., Giuliani, G., de Wit, M., Rangel, C. K., Venø, M. T., Schulte, J. T., Gomes-Duarte, A., Senthilkumar, K., Puhakka, N., Kjems, J., de Graan, P. N. E. & Pasterkamp, R. J. (2024). Compartment-specific small non-coding RNA changes and nucleolar defects in human mesial temporal lobe epilepsy. Acta Neuropathologica, 148(1), Article 61. https://doi.org/10.1007/s00401-024-02817-8

Salomonsen, C., Martyn, A., Quilbé, J., Björgvinsdóttir, Þ. N., Andersen, S. U., Radutoiu, S. & Glasius, M. (2024). Comprehensive characterization of the rhizosphere metabolome: A novel method for non-targeted analysis of Lotus japonicus root exudates. Rhizosphere, 32, Article 100957. https://doi.org/10.1016/j.rhisph.2024.100957

Mehmood, S., Thirup, S. S., Ahmed, S., Bashir, N., Saeed, A., Rafiq, M., Saeed, Q., Najam-ul-Haq, M., Khaliq, B., Ibrahim, M., Alonazi, W. B. & Akrem, A. (2024). Crystal structure of Kunitz-type trypsin inhibitor: Entomotoxic effect of native and encapsulated protein targeting gut trypsin of Tribolium castaneum Herbst. Computational and Structural Biotechnology Journal, 23, 3132-3142. https://doi.org/10.1016/j.csbj.2024.07.023

Mendoza-Suárez, M., Akyol, T. Y., Nadzieja, M. & Andersen, S. U. (2024). Increased diversity of beneficial rhizobia enhances faba bean growth. Nature Communications, 15(1), Article 10673. https://doi.org/10.1038/s41467-024-54940-5

Knudsen, L. J., Rauh, V., Pedersen, J. N., Dekker, P., Otzen, D. E., Larsen, L. B. & Nielsen, S. D. H. (2024). Insight into protein crosslinking and casein polymerization in pre- and posthydrolyzed lactose-free ultra-high-temperature milk during long-term storage. Journal of Dairy Science, 107(12), 10497-10511. https://doi.org/10.3168/jds.2024-25103

Khemka, N., Morris, G., Kazemzadeh, L., Costard, L. S., Neubert, V., Bauer, S., Rosenow, F., Venø, M. T., Kjems, J., Henshall, D. C., Prehn, J. H. M. & Connolly, N. M. C. (2024). Integrative network analysis of miRNA-mRNA expression profiles during epileptogenesis in rats reveals therapeutic targets after emergence of first spontaneous seizure. Scientific Reports, 14(1), Article 15313. https://doi.org/10.1038/s41598-024-66117-7

Shahsavari, S., Rad, M. B., Hajiaghajani, A., Rostami, M., Hakimian, F., Jafarzadeh, S., Hasany, M., Collingwood, J. F., Aliakbari, F., Fouladiha, H., Bardania, H., Otzen, D. E. & Morshedi, D. (2024). Magnetoresponsive liposomes applications in nanomedicine: A comprehensive review. Biomedicine & Pharmacotherapy, 181, Article 117665. https://doi.org/10.1016/j.biopha.2024.117665

Czarnocka-Cieciura, A., Poznański, J., Turtola, M., Tomecki, R., Krawczyk, P. S., Mroczek, S., Orzeł, W., Saha, U., Jensen, T. H., Dziembowski, A. & Tudek, A. (2024). Modeling of mRNA deadenylation rates reveal a complex relationship between mRNA deadenylation and decay. EMBO Journal, 43(24), 6525-6554. Article e1737. https://doi.org/10.1038/s44318-024-00258-3

Juul-Kristensen, T., Thiesen, C., Haurum, L. W., Keller-Socin, J. G., Lendamba, R. W., Zoleko Manego, R., Betouke, M. E., Knudsen, B. R., Pareja, E., Pareja-Tobes, E., Labouriau, R., Ghyslain, M.-N. & Tesauro, C. (2024). Non-Invasive Malaria Detection in Sub-Saharan Africa Using a DNA-Based Sensor System. Sensors, 24(24), Article 7947. https://doi.org/10.3390/s24247947

Birkmose, N., Frydendahl, E. U. & Knudsen, C. R. (2024). Optimized Construction of a Yeast SICLOPPS Library for Unbiased In Vivo Selection of Cyclic Peptides. Biochemistry, 63(24), 3273-3286. https://doi.org/10.1021/acs.biochem.4c00013

Rodriguez-Paniagua, A., Tesauro, C., Knudsen, B. R., Fuertes, M. & Alonso, C. (2024). Phosphine Oxide Indenoquinoline Derivatives: Synthesis and Biological Evaluation as Topoisomerase I Inhibitors and Antiproliferative Agents. Molecules, 29(24), Article 5992. https://doi.org/10.3390/molecules29245992

Wu, G., Rouvière, J. O., Schmid, M. & Heick Jensen, T. (2024). RNA 3′end tailing safeguards cells against products of pervasive transcription termination. Nature Communications, 15(1), Article 10446. https://doi.org/10.1038/s41467-024-54834-6

Okholm, K. R., Nooteboom, S. W., Vinther, J. N., Lamberti, V., Dey, S., Andersen, E. S., Zijlstra, P. & Sutherland, D. S. (2024). Single-Molecule Multivalent Interactions Revealed by Plasmon-Enhanced Fluorescence. ACS Nano, 18(52), 35429-35442. https://doi.org/10.1021/acsnano.4c12600

Pektas, A., Panitz, F. & Thomsen, B. (2024). TrAnnoScope: A Modular Snakemake Pipeline for Full-Length Transcriptome Analysis and Functional Annotation. Genes, 15(12), Article 1547. https://doi.org/10.3390/genes15121547

Serrano, K., Tedeschi, F., Andersen, S. U. & Scheller, H. V. (2024). Unraveling plant-microbe symbioses using single-cell and spatial transcriptomics. Trends in Plant Science, 29(12), 1356-1367. https://doi.org/10.1016/j.tplants.2024.06.008

Ottosson, F., Russo, F., Abrahamsson, A., MacSween, N., Courraud, J., Skogstrand, K., Melander, O., Ericson, U., Orho-Melander, M., Cohen, A. S., Grove, J., Mortensen, P. B., Hougaard, D. M. & Ernst, M. (2024). Unraveling the metabolomic architecture of autism in a large Danish population-based cohort. BMC Medicine, 22(1), Article 302. https://doi.org/10.1186/s12916-024-03516-7

Pupak, A., Rodríguez-Navarro, I., Sathasivam, K., Singh, A., Essmann, A., del Toro, D., Ginés, S., Mouro Pinto, R., Bates, G. P., Vang Ørom, U. A., Martí, E. & Brito, V. (2024). m⁶A modification of mutant huntingtin RNA promotes the biogenesis of pathogenic huntingtin transcripts. EMBO Reports, 25(11), 5026-5052. https://doi.org/10.1038/s44319-024-00283-7

Dybdahl Krebs, M., Georgii Hellberg, K. L., Lundberg, M., Appadurai, V., Ohlsson, H., Pedersen, E., Steinbach, J., Matthews, J., Border, R., LaBianca, S., Calle, X., Meijsen, J. J., Ingason, A., Buil, A., Vilhjálmsson, B. J., Flint, J., Bacanu, S. A., Cai, N., Dahl, A. ... iPSYCH Study Consortium (2024). Genetic liability estimated from large-scale family data improves genetic prediction, risk score profiling, and gene mapping for major depression. American Journal of Human Genetics, 111(11), 2494-2509. https://doi.org/10.1016/j.ajhg.2024.09.009

Gamaleldin, M., Yu, N. K., Diedrich, J. K., Ma, Y., Wienand, A., McClatchy, D. B., Nykjaer, A., Nabavi, S. & Yates, J. R. (2024). DiDBiT-TMT: A Novel Method to Quantify Changes in the Proteomic Landscape Induced by Neural Plasticity. Journal of Proteome Research, 23(11), 4878-4895. https://doi.org/10.1021/acs.jproteome.4c00180

Davis, M. C., André, A. A. M. & Kjaergaard, M. (2024). Entering the Next Phase: Predicting Biological Effects of Biomolecular Condensates. Journal of Molecular Biology, 436(21), Article 168645. https://doi.org/10.1016/j.jmb.2024.168645

Hansen, S. B., Luu, T. B., Gysel, K., Lironi, D., Krönauer, C., Rübsam, H., Jensen, I. B., Tsitsikli, M., Birkefeldt, T. G., Trgovcevic, A., Stougaard, J., Radutoiu, S. & Andersen, K. R. (2024). A conserved juxtamembrane motif in plant NFR5 receptors is essential for root nodule symbiosis. Proceedings of the National Academy of Sciences of the United States of America, 121(46), e2405671121. Article e2405671121. https://doi.org/10.1073/pnas.2405671121

Imamura, K., Garland, W., Schmid, M., Jakobsen, L., Sato, K., Rouvière, J. O., Jakobsen, K. P., Burlacu, E., Lopez, M. L., Lykke-Andersen, S., Andersen, J. S. & Jensen, T. H. (2024). A functional connection between the Microprocessor and a variant NEXT complex. Molecular Cell, 84(21), 4158-4174.e6. https://doi.org/10.1016/j.molcel.2024.10.015

Baindoor, S., Gibriel, H. A. Y., Venø, M. T., Su, J., Morrissey, E. P., Jirström, E., Woods, I., Kenny, A., Alves, M., Halang, L., Fabbrizio, P., Bilen, M., Engel, T., Hogg, M. C., Bendotti, C., Nardo, G., Slack, R. S., Kjems, J. & Prehn, J. H. M. (2024). Distinct fingerprints of tRNA-derived small non-coding RNA in animal models of neurodegeneration. Disease Models & Mechanisms, 17(11), Article dmm050870. https://doi.org/10.1242/dmm.050870

Davidson, L., Rouvière, J. O., Sousa-Luís, R., Nojima, T., Proudfoot, N. J., Jensen, T. H. & West, S. (2024). DNA-directed termination of mammalian RNA polymerase II. Genes and Development, 38(21-24), 998-1019. https://doi.org/10.1101/gad.351978.124

Nakamura, H., Yamamoto, S., Kawamura, Y. K., Kitazawa, T., Kimura, M. & Kitazawa, Y. (2024). Enhancing Membrane Permeability of Fluorescein-Type Chromophore Through Covalent Attachment of Chlorinated Dodecaborate. Molecules, 29(22), Article 5416. https://doi.org/10.3390/molecules29225416

Chen, G., Kobek-Kjeldager, C., Jensen, L. D., Kristensen, J. K., Kaiser, M., Thodberg, K., Zhang, G., Rong, L., Herskin, M. S. & Foldager, L. (2024). Experimental study on temperature difference between the interior and exterior of the vehicle transporting weaner pigs. Biosystems Engineering, 247, 119-131. https://doi.org/10.1016/j.biosystemseng.2024.09.001

Garcia-Erill, G., Wang, X., Rasmussen, MS., Quinn, L., Khan, A., Bertola, LD., Santander, CG., Balboa, RF., Ogutu, JO., Pečnerová, P., Hanghøj, K., Kuja, J., Nursyifa, C., Masembe, C., Muwanika, V., Bibi, F., Moltke, I., Siegismund, HR., Albrechtsen, A. & Heller, R. (2024). Extensive Population Structure Highlights an Apparent Paradox of Stasis in the Impala (Aepyceros melampus). Molecular Ecology, 33(22), Article e17539. https://doi.org/10.1111/mec.17539

Czajewski, I., Swain, B., Xu, J., McDowall, L., Ferenbach, A. T. & van Aalten, D. M. F. (2024). Rescuable sleep and synaptogenesis phenotypes in a Drosophila model of O-GlcNAc transferase intellectual disability. eLife, 13. https://doi.org/10.7554/eLife.90376

Roth, O., Yechezkel, S., Serero, O., Eliyahu, A., Vints, I., Tzeela, P., Carignano, A., Janacek, D. P., Peters, V., Kessel, A., Dwivedi, V., Carmeli-Weissberg, M., Shaya, F., Faigenboim-Doron, A., Ung, K. L., Pedersen, B. P., Riov, J., Klavins, E., Dawid, C. ... Weinstain, R. (2024). Slow release of a synthetic auxin induces formation of adventitious roots in recalcitrant woody plants. Nature Biotechnology, 42(11), 1705-1716. https://doi.org/10.1038/s41587-023-02065-3

Nielsen, L. S., Šantl-Temkiv, T., Palomeque Sánchez, M., Massling, A., Ward, J. C., Jensen, P. B., Boesen, T., Petters, M., Finster, K., Bilde, M. & Rosati, B. (2024). Water Uptake of Airborne Cells of P. syringae Measured with a Hygroscopicity Tandem Differential Mobility Analyzer. Environmental Science & Technology, 58(43), 19211-19221. https://doi.org/10.1021/acs.est.4c01817

Liu, J., McRae, E. K. S., Zhang, M., Geary, C., Andersen, E. S. & Ren, G. (2024). Non-averaged single-molecule tertiary structures reveal RNA self-folding through individual-particle cryo-electron tomography. Nature Communications, 15(1), 9084. Article 9084. https://doi.org/10.1038/s41467-024-52914-1

Žvirblis, M., Sakalauskas, A., Janvand, S. H. A., Dudutienė, V., Žiaunys, M., Sniečkutė, R., Otzen, D. E., Smirnovas, V. & Matulis, D. (2024). Structure-Activity Relationship of Fluorinated Benzenesulfonamides as Inhibitors of Amyloid-β Aggregation. Chemistry - A European Journal, 30(58), Article e202402330. https://doi.org/10.1002/chem.202402330

Vilstrup, A. P., Gupta, A., Rasmussen, A. J., Ebert, A., Riedelbauch, S., Lukassen, M. V., Hayashi, R. & Andersen, P. (2024). A germline PAF1 paralog complex ensures cell type-specific gene expression. Genes & Development, 38(17-20), 866-886. https://doi.org/10.1101/gad.351930.124

Larsen, S. T., Dannersø, J. K., Nielsen, C. J. F., Poulsen, L. R., Palmgren, M. & Nissen, P. (2024). Conserved N-terminal Regulation of the ACA8 Calcium Pump with Two Calmodulin Binding Sites. Journal of Molecular Biology, 436(20), Article 168747. https://doi.org/10.1016/j.jmb.2024.168747

Kruse, T., Garvanska, D. H., Varga, J. K., Garland, W., McEwan, B. C., Hein, J. B., Weisser, M. B., Benavides-Puy, I., Chan, C. B., Sotelo-Parrilla, P., Mendez, B. L., Jeyaprakash, A. A., Schueler-Furman, O., Jensen, T. H., Kettenbach, A. N. & Nilsson, J. (2024). Substrate recognition principles for the PP2A-B55 protein phosphatase. Science Advances, 10(40), eadp5491. Article eadp5491. https://doi.org/10.1126/sciadv.adp5491

Garland, W. & Jensen, T. H. (2024). Nuclear sorting of short RNA polymerase II transcripts. Molecular Cell, 84(19), 3644-3655. https://doi.org/10.1016/j.molcel.2024.08.024

Brodszkij, E., Ryberg, C., Lyons, J. A., Juhl, D. W., Nielsen, N. C., Sigalas, N. I., Lyulin, A. V., Pedersen, J. S. & Städler, B. (2024). Poly(Sitosterol)-Based Hydrophobic Blocks in Amphiphilic Block Copolymers for the Assembly of Hybrid Vesicles. Small, 20(40), Article 2401934. https://doi.org/10.1002/smll.202401934