Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Coutant, M. P., Malmkvist, J., Foldager, L. & Herskin, M. S. (2023). The importance of carefully selecting vocalization parameters to quantify pain and stress in piglets. In Book of Abstracts - ISAE 2023: 56th Congress of the International Society for Applied Ethology ISAE 2023 (pp. 68-68).
Andersen-Civil, A. I. S., Sawale, R. A. & Vanwalleghem, G. C. (2023). Zebrafish (Danio rerio) as a translational model for neuro-immune interactions in the enteric nervous system in autism spectrum disorders. Brain, Behavior, and Immunity, 112, 254-266. https://doi.org/10.1016/j.bbi.2023.06.001
Heiland, M., Connolly, N. M. C., Mamad, O., Nguyen, N. T., Kesavan, J. C., Langa, E., Fanning, K., Sanfeliu, A., Yan, Y., Su, J., Venø, M. T., Costard, L. S., Neubert, V., Engel, T., Hill, T. D. M., Freiman, T. M., Mahesh, A., Tiwari, V. K., Rosenow, F. ... Henshall, D. C. (2023). MicroRNA-335-5p suppresses voltage-gated sodium channel expression and may be a target for seizure control. Proceedings of the National Academy of Sciences (PNAS), 120(30), e2216658120. Article e2216658120. https://doi.org/10.1073/pnas.2216658120
Schoenmakers, L. L. J., Yewdall, N. A., Lu, T., André, A. A. M., Nelissen, F. H. T., Spruijt, E. & Huck, W. T. S. (2023). In Vitro Transcription-Translation in an Artificial Biomolecular Condensate. ACS Synthetic Biology, 12(7), 2004-2014. https://doi.org/10.1021/acssynbio.3c00069
Flygaard, R. K., Habeck, M. & Nissen, P. (2023). Technical Comment on “Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling”. Science Advances, 9(28), Article adh0821. https://doi.org/10.1126/sciadv.adh0821
Cullimore, J., Fliegmann, J., Gasciolli, V., Gibelin-Viala, C., Carles, N., Luu, T. B., Girardin, A., Cumener, M., Maillet, F., Pradeau, S., Fort, S., Bono, J. J., Gough, C. & Lefebvre, B. (2023). Evolution of Lipochitooligosaccharide Binding to a LysM-RLK for Nodulation in Medicago truncatula. Plant and Cell Physiology, 64(7), 746-757. https://doi.org/10.1093/pcp/pcad033
Luu, T. B., Carles, N., Bouzou, L., Gibelin-Viala, C., Remblière, C., Gasciolli, V., Bono, J. J., Lefebvre, B., Pauly, N. & Cullimore, J. (2023). Analysis of the structure and function of the LYK cluster of Medicago truncatula A17 and R108. Plant Science, 332, Article 111696. https://doi.org/10.1016/j.plantsci.2023.111696
Borg, K. N., Cheng, G., Shetty, A., Wang, T., Tesauro, C., Knudsen, B. R. & Ho, Y.-P. (2023). An Integrated Platform for the Assessment of Fluorescent Signals in Hydrogel Beads Produced by Droplet Microfluidics. In Proceedings 2023 IEEE 23rd International Conference on Nanotechnology (NANO) (pp. 180-184). IEEE. https://doi.org/10.1109/NANO58406.2023.10231287
Lopes-Rodrigues, V., Boxy, P., Sim, E., Park, D. I., Habeck, M., Carbonell, J., Andersson, A., Fernández-Suárez, D., Nissen, P., Nykjær, A. & Kisiswa, L. (2023). AraC interacts with p75NTR transmembrane domain to induce cell death of mature neurons. Cell Death and Disease, 14(7), Article 440. https://doi.org/10.1038/s41419-023-05979-7
Rouvière, J. O., Salerno-Kochan, A., Lykke-Andersen, S., Garland, W., Dou, Y., Rathore, O., Molska, E. Š., Wu, G., Schmid, M., Bugai, A., Jakobsen, L., Žumer, K., Cramer, P., Andersen, J. S., Conti, E. & Jensen, T. H. (2023). ARS2 instructs early transcription termination-coupled RNA decay by recruiting ZC3H4 to nascent transcripts. Molecular Cell, 83(13), 2240-2257.e6. https://doi.org/10.1016/j.molcel.2023.05.028
Lucotte, E. A., Guðmundsdóttir, V. B., Jensen, J. M., Skov, L., Macià, M. C., Almstrup, K., Schierup, M. H., Helgason, A. & Stefansson, K. (2023). Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions. Nature Communications, 14(1), Article 3990. https://doi.org/10.1038/s41467-023-39644-6
Tolomeo, D., Traversa, D., Venuto, S., Ebbesen, K., Garcia Rodriguez, J. L., Tamma, G., Ranieri, M., Simonetti, G., Ghetti, M., Paganelli, M., Visci, G., Liso, A., Kok, K., Muscarella, L. A., Fabrizio, F. P., Frassanito, M. A., Lamanuzzi, A., Saltarella, I., Solimando, A. G. ... Storlazzi, C. T. (2023). circPVT1 and PVT1/AKT3 show a role in cell proliferation, apoptosis, and tumor subtype-definition in Small Cell Lung Cancer. Genes, Chromosomes & Cancer, 62(7), 377-391. https://doi.org/10.1002/gcc.23121
Als, T. D., Kurki, M. I., Grove, J., Voloudakis, G., Therrien, K., Tasanko, E., Nielsen, T. T., Naamanka, J., Veerapen, K., Levey, D. F., Bendl, J., Bybjerg-Grauholm, J., Zeng, B., Demontis, D., Rosengren, A., Athanasiadis, G., Bækved-Hansen, M., Qvist, P., Bragi Walters, G. ... Børglum, A. D. (2023). Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses. Nature Medicine, 29(7), 1832-1844. https://doi.org/10.1038/s41591-023-02352-1
Larsen, K. E. & Callesen, H. (2023). Developmental expression of CREB1 and NFATC2 in pig embryos. Molecular Biology Reports, 50(7), 6265-6271. https://doi.org/10.1007/s11033-023-08501-6
Skakkebæk, A., Kjær-Sørensen, K., Matchkov, V. V., Christensen, L. L., Just, J., Cömert, C., Andersen, N. H., Oxvig, C. & Gravholt, C. H. (2023). Dosage of the pseudoautosomal gene SLC25A6 is implicated in QTc interval duration. Scientific Reports, 13(1), Article 12089. https://doi.org/10.1038/s41598-023-38867-3
Osório, C., Watt, A. & Kisiswa, L. (2023). Editorial: Molecular mechanisms and pathways in cerebellar function. Frontiers in Molecular Neuroscience, 16, Article 1258215. https://doi.org/10.3389/fnmol.2023.1258215
Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N. ... Zhang, G. (2023). Eighty million years of rapid evolution of the primate Y chromosome. Nature Ecology & Evolution, 7(7), 1114-1130. https://doi.org/10.1038/s41559-022-01974-x
Slavensky, A. M., Christiansen, M. P. V. & Hammer, B. (2023). Generating candidates in global optimization algorithms using complementary energy landscapes. Journal of Chemical Physics, 159(2), Article 024123. https://doi.org/10.1063/5.0156218
Evans, D. C. S., Khamas, A. B., Marcussen, L., Rasmussen, K. S., Klitgaard, J. K., Kallipolitis, B. H., Nielsen, J., Otzen, D. E., Leake, M. C. & Meyer, R. L. (2023). GFP fusions of Sec-routed extracellular proteins in Staphylococcus aureusreveal surface-associated coagulase in biofilms. Microbial Cell, 10(7), 145-156. https://doi.org/10.15698/mic2023.07.800
Singh, Y., Trautwein, C., Romani, J., Salker, M. S., Neckel, P. H., Fraccaroli, I., Abeditashi, M., Woerner, N., Admard, J., Dhariwal, A., Dueholm, M. K. D., Schäfer, K. H., Lang, F., Otzen, D. E., Lashuel, H. A., Riess, O. & Casadei, N. (2023). Overexpression of human alpha-Synuclein leads to dysregulated microbiome/metabolites with ageing in a rat model of Parkinson disease. Molecular Neurodegeneration, 18(1), Article 44. https://doi.org/10.1186/s13024-023-00628-1
Rolland, T., Cliquet, F., Anney, R. J. L., Moreau, C., Traut, N., Mathieu, A., Huguet, G., Duan, J., Warrier, V., Portalier, S., Dry, L., Leblond, C. S., Douard, E., Amsellem, F., Malesys, S., Maruani, A., Toro, R., Børglum, A. D., Grove, J. ... Bourgeron, T. (2023). Phenotypic effects of genetic variants associated with autism. Nature Medicine, 29(7), 1671-1680. https://doi.org/10.1038/s41591-023-02408-2
Wang, X., Walker, A., Revez, J. A., Ni, G., Adams, M. J., McIntosh, A. M. & Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium (2023). Polygenic risk prediction: why and when out-of-sample prediction R2 can exceed SNP-based heritability. American Journal of Human Genetics, 110(7), 1207-1215. https://doi.org/10.1016/j.ajhg.2023.06.006
Kjeldbjerg Lassen, J., Bradshaw, R., Villesen, P. & Francese, S. (2023). Statistical Modelling Investigation of MALDI-MSI-Based Approaches for Document Examination. Molecules, 28(13), Article 5207. https://doi.org/10.3390/molecules28135207
McRae, E. K. S., Rasmussen, H. Ø., Liu, J., Bøggild, A., Nguyen, M. T. A., Sampedro Vallina, N., Boesen, T., Pedersen, J. S., Ren, G., Geary, C. & Andersen, E. S. (2023). Structure, folding and flexibility of co-transcriptional RNA origami. Nature Nanotechnology, 18(7), 808-817. https://doi.org/10.1038/s41565-023-01321-6
Martens, A. K., Erwig, M., Patzig, J., Fledrich, R., Füchtbauer, E. M. & Werner, H. B. (2023). Targeted inactivation of the Septin2 and Septin9 genes in myelinating Schwann cells of mice. Cytoskeleton, 80(7-8), 290-302. https://doi.org/10.1002/cm.21736
Oxvig, C. & Conover, C. A. (2023). The Stanniocalcin-PAPP-A-IGFBP-IGF Axis. Journal of Clinical Endocrinology and Metabolism, 108(7), 1624-1633. https://doi.org/10.1210/clinem/dgad053
Dalskov, L., Gad, H. H. & Hartmann, R. (2023). Viral recognition and the antiviral interferon response. EMBO Journal, 42(14), Article e112907. https://doi.org/10.15252/embj.2022112907
Sønderby, T. V., Louros, N. N., Khodaparast, L., Khodaparast, L., Madsen, D. J., Olsen, W. P., Moonen, N., Nagaraj, M., Sereikaite, V., Strømgaard, K., Rousseau, F., Schymkowitz, J. & Otzen, D. E. (2023). Sequence-targeted Peptides Divert Functional Bacterial Amyloid Towards Destabilized Aggregates and Reduce Biofilm Formation. Journal of Molecular Biology, 435(11), 168039. Article 168039. https://doi.org/10.1016/j.jmb.2023.168039
Seeler, S., Andersen, M. S., Sztanka-Toth, T., Rybiczka-Tešulov, M., van den Munkhof, M. H., Chang, C. C., Maimaitili, M., Venø, M. T., Hansen, T. B., Pasterkamp, R. J., Rybak-Wolf, A., Denham, M., Rajewsky, N., Kristensen, L. S. & Kjems, J. (2023). A Circular RNA Expressed from the FAT3 Locus Regulates Neural Development. Molecular Neurobiology, 60(6), 3239–3260. https://doi.org/10.1007/s12035-023-03253-7
Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A. ... Bonet, T. M. (2023). A global catalog of whole-genome diversity from 233 primate species. Science, 380(6648), 906-913. https://doi.org/10.1126/science.abn7829
Sun, C. & Schuman, E. (2023). A multi-omics view of neuronal subcellular protein synthesis. Current Opinion in Neurobiology, 80, Article 102705. https://doi.org/10.1016/j.conb.2023.102705
Omelková, M., Fenger, C. D., Murray, M., Hammer, T. B., Pravata, V. M., Bartual, S. G., Czajewski, I., Bayat, A., Ferenbach, A. T., Stavridis, M. P. & van Aalten, D. M. F. (2023). An O-GlcNAc transferase pathogenic variant linked to intellectual disability affects pluripotent stem cell self-renewal. DMM Disease Models and Mechanisms, 16(6), Article dmm049132. https://doi.org/10.1242/dmm.049132
Catapano, C., Rahm, J. V., Omer, M., Teodori, L., Kjems, J., Dietz, M. S. & Heilemann, M. (2023). Biased activation of the receptor tyrosine kinase HER2. Cellular and Molecular Life Sciences, 80(6), Article 158. https://doi.org/10.1007/s00018-023-04806-8
Martin, M., Nilsson, S. C., Eikrem, D., Fromell, K., Scavenius, C., Vogt, L. M., Bielecka, E., Potempa, J., Enghild, J. J., Nilsson, B., Ekdahl, K. N., Kapetanovic, M. C. & Blom, A. M. (2023). Citrullination of C1-inhibitor as a mechanism of impaired complement regulation in rheumatoid arthritis. Frontiers in Immunology, 14, Article 1203506. https://doi.org/10.3389/fimmu.2023.1203506
Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L. ... Wu, D. D. (2023). Comparative genomics reveals the hybrid origin of a macaque group. Science Advances, 9(22), Article eadd3580. https://doi.org/10.1126/sciadv.add3580
Stock, C., Heger, T., Hansen, S. B., Larsen, S. T., Habeck, M., Dieudonné, T. L. A., Driller, R. & Nissen, P. (2023). Fast-forward on P-type ATPases: recent advances on structure and function. Biochemical Society Transactions, 51(3), 1347-1360. https://doi.org/10.1042/BST20221543
Sørensen, E. F., Harris, R. A., Zhang, L., Raveendran, M., Kuderna, L. F. K., Walker, J. A., Storer, J. M., Kuhlwilm, M., Fontsere, C., Seshadri, L., Bergey, C. M., Burrell, A. S., Bergman, J., Phillips-Conroy, J. E., Shiferaw, F., Chiou, K. L., Chuma, I. S., Keyyu, J. D., Fischer, J. ... Rogers, J. (2023). Genome-wide coancestry reveals details of ancient and recent male-driven reticulation in baboons. Science (New York, N.Y.), 380(6648), Article eabn8153. https://doi.org/10.1126/science.abn8153
Cheng, Z., Ferris, C., Crowe, M. A., Ingvartsen, K. L., Grelet, C., Vanlierde, A., Foldager, L., Becker, F., Wathes, D. C. & GplusE Consortium (2023). Hepatic global transcriptomic profiles of Holstein cows according to parity reveal age-related changes in early lactation. International Journal of Molecular Sciences , 24(12), Article 9906. https://doi.org/10.3390/ijms24129906
Hao, D., Wang, X., Yang, Y., Chen, H., Thomsen, B. & Holm, L. E. (2023). MicroRNA sequence variation can impact interactions with target mRNA in cattle. Gene, 868, Article 147373. https://doi.org/10.1016/j.gene.2023.147373
Sørensen, E. S. & Christensen, B. (2023). Milk Osteopontin and Human Health. Nutrients, 15(11), Article 2423. https://doi.org/10.3390/nu15112423
Rivas-González, I., Rousselle, M., Li, F., Zhou, L., Dutheil, J. Y., Munch, K., Shao, Y., Wu, D., Schierup, M. H. & Zhang, G. (2023). Pervasive incomplete lineage sorting illuminates speciation and selection in primates. Science, 380(6648), eabn4409. Article eabn4409. https://doi.org/10.1126/science.abn4409
Shao, Y., Zhou, L., Li, F., Zhao, L., Zhang, B. L., Shao, F., Chen, J. W., Chen, C. Y., Bi, X., Zhuang, X. L., Zhu, H. L., Hu, J., Sun, Z., Li, X., Wang, D., Rivas-González, I., Wang, S., Wang, Y. M., Chen, W. ... Wu, D. D. (2023). Phylogenomic analyses provide insights into primate evolution. Science (New York, N.Y.), 380(6648), 913-924. https://doi.org/10.1126/science.abn6919
Gielnik, M., Szymańska, A., Dong, X., Jarvet, J., Svedružić, Ž. M., Gräslund, A., Kozak, M. & Wärmländer, S. K. T. S. (2023). Prion Protein Octarepeat Domain Forms Transient β-Sheet Structures upon Residue-Specific Binding to Cu(II) and Zn(II) Ions. Biochemistry, 62(11), 1689-1705. https://doi.org/10.1021/acs.biochem.3c00129
Bavnhøj, L., Driller, J. H., Zuzic, L., Stange, A. D., Schiøtt, B. & Pedersen, B. P. (2023). Structure and sucrose binding mechanism of the plant SUC1 sucrose transporter. Nature Plants, 9(6), 938-950. https://doi.org/10.1038/s41477-023-01421-0
Romon-Ochoa, P., Smith, O., Lewis, A., Kupper, Q., Shamsi, W., Rigling, D., Pérez-Sierra, A. & Ward, L. (2023). Temperature Effects on the Cryphonectria hypovirus 1 Accumulation and Recovery within Its Fungal Host, the Chestnut Blight Pathogen Cryphonectria parasitica. Viruses, 15(6), Article 1260. https://doi.org/10.3390/v15061260
Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R. ... Farh, K. K. H. (2023). The landscape of tolerated genetic variation in humans and primates. Science (New York, N.Y.), 380(6648), Article abn8197. https://doi.org/10.1126/science.abn8197
Andersen, G. R. (2023). The lufaxin inhibitor caught in the act. Blood, 141(25), 3017-3018. https://doi.org/10.1182/blood.2023020507
Lauterbur, M. E., Munch, K. & Enard, D. (2023). Versatile Detection of Diverse Selective Sweeps with Flex-Sweep. Molecular Biology and Evolution, 40(6), Article msad139. https://doi.org/10.1093/molbev/msad139
Boxy, P., Nykjær, A. & Kisiswa, L. (2023). Building better brains: the pleiotropic function of neurotrophic factors in postnatal cerebellar development. Frontiers in Molecular Neuroscience, 16, Article 1181397. https://doi.org/10.3389/fnmol.2023.1181397
Olesen, H. G., Michailidou, I., Zelek, W. M., Vreijling, J., Ruizendaal, P., de Klein, F., Marquart, J. A., Kuipers, T. B., Mei, H., Zhang, Y., Ahasan, M., Johnson, K. K., Wang, Y., Morgan, B. P., van Dijk, M., Fluiter, K., Andersen, G. R. & Baas, F. (2023). Development, Characterization, and in vivo Validation of a Humanized C6 Monoclonal Antibody that Inhibits the Membrane Attack Complex. Journal of Innate Immunity, 15(1), 16-36. https://doi.org/10.1159/000524587

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Lisbeth Heilesen