Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Qu, S., Zhong, Y., Shang, R., Zhang, X., Song, W., Kjems, J. & Li, H. (2017). The emerging landscape of circular RNA in life processes. RNA Biology, 14(8), 992-999. https://doi.org/10.1080/15476286.2016.1220473
Vogt, L. M., Talens, S., Kwasniewicz, E., Scavenius, C., Struglics, A., Enghild, J. J., Saxne, T. & Blom, A. M. (2017). Activation of Complement by Pigment Epithelium-Derived Factor in Rheumatoid Arthritis. Journal of Immunology, 199(3), 1113-1121. https://doi.org/10.4049/jimmunol.1700018
Christensen, R., Owens, D. M., Füchtbauer, A. C., Gunnarsson, A., Ramsing, M., Füchtbauer, E. M. & Jensen, U. B. (2017). Constitutive transgene expression of Stem Cell Antigen-1 in the hair follicle alters the sensitivity to tumor formation and progression. Stem Cell Research, 23, 109-118. https://doi.org/10.1016/j.scr.2017.07.002
Ernst, E. H., Grøndahl, M. L., Grund, S., Hardy, K., Heuck, A., Sunde, L., Franks, S., Andersen, C. Y., Villesen, P. & Lykke-Hartmann, K. (2017). Dormancy and activation of human oocytes from primordial and primary follicles: molecular clues to oocyte regulation. Human Reproduction, 32(8), 1684-1700. https://doi.org/10.1093/humrep/dex238
Andersen, N., Krauth, N. & Nabavi, S. (2017). Hebbian plasticity in vivo: relevance and induction. Current Opinion in Neurobiology, 45, 188-192. https://doi.org/10.1016/j.conb.2017.06.001
Pedersen, C. T., Loke, I., Lorentzen, A., Wolf, S., Kamble, M., Kristensen, S. K., Munch, D., Radutoiu, S., Spillner, E., Roepstorff, P., Thaysen-Andersen, M., Stougaard, J. & Dam, S. (2017). N-glycan maturation mutants in Lotus japonicus for basic and applied glycoprotein research. Plant Journal, 91(3), 394-407. https://doi.org/10.1111/tpj.13570
Senissar, M., Manav, M. C. & Brodersen, D. E. (2017). Structural conservation of the PIN domain active site across all domains of life. Protein Science, 26(8), 1474-1492. https://doi.org/10.1002/pro.3193
Duan, J., Sanggaard, K. W., Schauser, L., Lauridsen, S. E., Enghild, J. J., Schierup, M. H. & Wang, T. (2017). Transcriptome Analysis of the Response of Burmese Python to Digestion. GigaScience, 6(8), 1-51. Article gix057. https://doi.org/10.1093/gigascience/gix057
Skov, L., Schierup, M. H. & Danish Pan Genome Consortium (2017). Analysis of 62 hybrid assembled human Y chromosomes exposes rapid structural changes and high rates of gene conversion. PLoS Genetics, 13(8), Article e1006834. https://doi.org/10.1371/journal.pgen.1006834
Hollensen, A. K., Thomsen, R., Bak, R. O., Petersen, C. C., Ermegaard, E. R., Aagaard, L., Damgaard, C. K. & Mikkelsen, J. G. (2017). Improved microRNA suppression by WPRE-linked Tough Decoy microRNA sponges. RNA, 23(8), 1247-1258. https://doi.org/10.1261/rna.061192.117
Machelart, A., Van Vyve, M., Potemberg, G., Demars, A., De Trez, C., Tima, H. G., Vanwalleghem, G., Romano, M., Truyens, C., Letesson, J. J. & Muraille, E. (2017). Trypanosoma infection favors Brucella elimination via IL-12/IFNγ-dependent pathways. Frontiers in Immunology, 8(JUL), Article 903. https://doi.org/10.3389/fimmu.2017.00903
Greisen, S. R., Yan, Y., Hansen, A. S., Veno, M. T., Nyengaard, J. R., Moestrup, S. K., Hvid, M., Freeman, G. J., Kjems, J. & Deleuran, B. (2017). Extracellular Vesicles Transfer the Receptor Programmed Death-1 in Rheumatoid Arthritis. Frontiers in Immunology, 8(JUL), Article 851. https://doi.org/10.3389/fimmu.2017.00851
De Col, V., Fuchs, P., Nietzel, T., Elsässer, M., Voon, C. P., Candeo, A., Seeliger, I., Fricker, M. D., Grefen, C., Møller, I. M., Bassi, A., Lim, B. L., Zancani, M., Meyer, A. J., Costa, A., Wagner, S. & Schwarzländer, M. (2017). ATP sensing in living plant cells reveals tissue gradients and stress dynamics of energy physiology. eLife, 6, Article e26770. https://doi.org/10.7554/eLife.26770
Mortensen, S. A., Sander, B., Jensen, R. K., Pedersen, J. S., Golas, M., Jensenius, J. C., Hansen, A. G., Thiel, S. & Andersen, G. R. (2017). Reply to Arlaud et al. Structure of the C1 complex and the unbound C1r2s2 tetramer. Proceedings of the National Academy of Sciences (PNAS), 114(29), E5768-E5770. https://doi.org/10.1073/pnas.1704353114
Gruzdev, V., Korkin, D., Mooney, B. P., Havelund, J. F., Møller, I. M. & Thelen, J. J. (2017). Controlled modification of biomolecules by ultrashort laser pulses in polar liquids. Scientific Reports, 7(1), Article 5550. https://doi.org/10.1038/s41598-017-05761-8
Salašová, A., Yokota, C., Potěšil, D., Zdráhal, Z., Bryja, V. & Arenas, E. (2017). A proteomic analysis of LRRK2 binding partners reveals interactions with multiple signaling components of the WNT/PCP pathway. Molecular Neurodegeneration, 12(1), Article 54. https://doi.org/10.1186/s13024-017-0193-9
Søndergaard, D., Nielsen, S., Pedersen, C. N. S. & Besenbacher, S. (2017). Prediction of Primary Tumors in Cancers of Unknown Primary. Journal of integrative bioinformatics, 14(2). https://doi.org/10.1515/jib-2017-0013
Hvam, M. L., Cai, Y., Dagnæs-Hansen, F., Nielsen, J., Wengel, J., Kjems, J. & Howard, K. (2017). Fatty acid-modified gapmer antisense oligonucleotide and human serum albumin constructs for pharmacokinetic modulation. Molecular Therapy, 25(7), 1710-1717. https://doi.org/10.1016/j.ymthe.2017.05.009
Fuad, M. M. M. & Besenbacher, S. (2017). Modeling non-equilibrium population using variable-chromosome-length genetic algorithm. In 2017 IEEE Congress on Evolutionary Computation, CEC 2017 - Proceedings (pp. 2566-2573). Article 7969617 IEEE. https://doi.org/10.1109/CEC.2017.7969617
Meola, N. & Jensen, T. H. (2017). Targeting the nuclear RNA exosome: Poly(A) binding proteins enter the stage. RNA Biology, 14(7), 820-826. https://doi.org/10.1080/15476286.2017.1312227
Kristoffersen, E. L., Jørgensen, A. G., Jørgensen, L. A., Jensen, P. W., W Byl, J. A., Osheroff, N., Andersen, A. H., Stougaard, M., Ho, Y.-P. & Knudsen, B. R. (2017). Interlinked DNA nano-circles for measuring topoisomerase II activity at the level of single decatenation events. Nucleic Acids Research, 45(13), 7855-7869. https://doi.org/10.1093/nar/gkx480
Nyegaard, S., Andreasen, T. & Rasmussen, J. T. (2017). Lactadherin orthologs inhibit migration of human, porcine and murine intestinal epithelial cells. Food Science & Nutrition, 5(4), 934-942. https://doi.org/10.1002/fsn3.479
Nielsen, M. H., Flygaard, R. K. & Jenner, L. B. (2017). Structural analysis of ribosomal RACK1 and its role in translational control. Cellular Signalling, 35, 272-281. https://doi.org/10.1016/j.cellsig.2017.01.026
Mendoza Suarez, M. A. (2017). Bacterial Biosensors for in Vivo Spatiotemporal Mapping of Root Secretion. Plant Physiology, 174(3), 1289-1306. https://doi.org/10.1104/pp.16.01302
Debost, J.-C., Debost, M., Grove, J., Mors, O., Hougaard, D. M., Børglum, A. D., Mortensen, P. B. & Petersen, L. (2017). COMT Val158Met and MTHFR C677T moderate risk of schizophrenia in response to childhood adversity. Acta Psychiatrica Scandinavica, 136(1), 85-95. https://doi.org/10.1111/acps.12761
Weiner, D. J., Wigdor, E. M., Ripke, S., Walters, R. K., Kosmicki, J. A., Grove, J., Samocha, K. E., Goldstein, J. I., Okbay, A., Bybjerg-Grauholm, J., Werge, T., Hougaard, D. M., Taylor, J., Skuse, D., Devlin, B., Anney, R., Sanders, S. J., Bishop, S., Mortensen, P. B. ... iPSYCH-Broad Autism Group (2017). Polygenic transmission disequilibrium confirms that common and rare variation act additively to create risk for autism spectrum disorders. Nature Genetics, 49(7), 978-985. https://doi.org/10.1038/ng.3863
Otzen, D. E., Vad, B. S., Dueholm, M. S., Nielsen, P. H., Rouse, S. L. & Matthews, S. J. (2017). Self-organizing amyloid in bacteria. European Biophysics Journal, 46, S98-S98.
Otzen, D. E., Vad, B. S., Dueholm, M. S., Nielsen, P. H., Rouse, S. L. & Matthews, S. J. (2017). Self-organizing amyloid in bacteria. European Biophysics Journal, 46(supp 1), S341-S341. https://doi.org/10.1007/s00249-017-1222-x
He, Y., Staley, J. P., Andersen, G. R. & Nielsen, K. H. (2017). Structure of DEAH/RHA ATPase Prp43p bound to RNA implicates a pair of hairpins and motif Va in translocation along RNA. RNA, 23(7), 1110-1124. https://doi.org/10.1261/rna.060954.117
van Diggelen, F., Tepper, A., Petri, M. & Otzen, D. (2017). α-Synuclein Oligomers: A Study in Diversity. Israel Journal of Chemistry, 57(7), 699-723. https://doi.org/10.1002/ijch.201600116
Huang, C.-S., Pedersen, B. P. & Stokes, D. (2017). Crystal structure of the potassium-importing KdpFABC membrane complex. Nature, 546(7660), 681-685. https://doi.org/10.1038/nature22970
Bertl, J., Guo, Q., Rasmussen, M. J., Besenbacher, S., Nielsen, M. M., Hornshøj, H., Pedersen, J. S. & Hobolth, A. (2017). A Site Specific Model And Analysis Of The Neutral Somatic Mutation Rate In Whole-Genome Cancer Data. https://doi.org/10.1101/122879
Rajman, M., Metge, F., Fiore, R., Khudayberdiev, S., Aksoy-Aksel, A., Bicker, S., Reschke, C. R., Raoof, R., Brennan, G. P., Delanty, N., Farrell, M. A., O'Brien, D. F., Bauer, S., Norwood, B., Veno, M. T., Krueger, M., Braun, T., Kjems, J., Rosenow, F. ... Schratt, G. (2017). A microRNA-129-5p/Rbfox crosstalk coordinates homeostatic downscaling of excitatory synapses. EMBO Journal, 36(12), 1770-1787. https://doi.org/10.15252/embj.201695748
Bolvig, A. K., Nørskov, N., Hedemann, M. S., Foldager, L., McCarthy-Sinclair, B., Marco, M., Lærke, H. N. & Knudsen, K. E. B. (2017). The effect of antibiotics and diet on enterolactone concentration and metabolome studied by targeted and non-targeted LC-MS metabolomics. Journal of Proteome Research, 16(6), 2135-2150. https://doi.org/10.1021/acs.jproteome.6b00942
The Baboon Genome Analysis Consortium (2017). Papio baboon species indicative Alu elements. Genome Biology and Evolution, 9(6), 1788-1796. https://doi.org/10.1093/gbe/evx130
Sørensen, H. V., Pedersen, J. N., Pedersen, J. S. & Otzen, D. E. (2017). Tailoring thermal treatment to form liprotide complexes between oleic acid and different proteins. Biochimica et Biophysica Acta - Proteins and Proteomics, 1865(6), 682–693. https://doi.org/10.1016/j.bbapap.2017.03.011
Andersen, J. L., Lindberg, S., Langgård, M., Maltas, P. J., Rønn, L. C. B., Bundgaard, C., Strandbygaard, D., Thirup, S. & Watson, S. P. (2017). The identification of novel acid isostere based inhibitors of the VPS10P family sorting receptor Sortilin. Bioorganic & Medicinal Chemistry Letters, 27(11), 2629-2633. https://doi.org/10.1016/j.bmcl.2017.02.028
Jensen, J. H., Madsen, L. B., Panitz, F., Hornshøj, H., Nielsen, R. O., Bendixen, C., Oksbjerg, N. & Thomsen, B. (2017). Transcriptome dynamics during proliferation and differentiation of porcine primary satellite cells. Gene Reports, 7, 169-175. https://doi.org/10.1016/j.genrep.2017.04.007
Steengaard, J., Torvund-Jensen, J., Askbjerg, L., Clavsen, N., Kjaer-Sorensen, K., Oxvig, C. & Laursen, L. (2017). Identification of novel regulators of local MBP mRNA translation. Glia, 65(Special issue, S1), E397-E397. Article T12-076C .
Brødsgaard, A., Helth, T., Andersen, B. L. & Petersen, M. (2017). Rallying the Troops: How Sharing Knowledge With Grandparents Supports the Family of the Preterm Infant in Neonatal Intensive Care Unit. Advances in Neonatal Care, 17(3), E1-E10. https://doi.org/10.1097/ANC.0000000000000360
Fjelstrup, S., Andersen, M. B., Thomsen, J., Wang, J., Stougaard, M., Pedersen, F. S., Ho, Y.-P., Hede, M. S. & Knudsen, B. R. (2017). The Effects of Dithiothreitol on DNA. Sensors, 17(6), Article 1201. https://doi.org/10.3390/s17061201
Hartfield, M., Bataillon, T. & Glemin, S. (2017). The Evolutionary Interplay between Adaptation and Self-Fertilization. Trends in Genetics, 33(6), 420-431. https://doi.org/10.1016/j.tig.2017.04.002
Parrón, J. A., Ripollés, D., Pérez, M. D., Calvo, M., Rasmussen, J. T. & Sánchez, L. (2017). Antirotaviral Activity of Bovine and Ovine Dairy Byproducts. Journal of Agricultural and Food Chemistry, 65(21), 4280-4288. https://doi.org/10.1021/acs.jafc.7b01059
Andersen, K. R. (2017). Insights into Rad3 kinase recruitment from the crystal structure of the DNA damage checkpoint protein Rad26. Journal of Biological Chemistry, 292(20), 8149-8157. https://doi.org/10.1074/jbc.M117.780189
Liu, M., Yuan, C., Jensen, J. K., Zhao, B., Jiang, Y., Jiang, L. & Huang, M. (2017). The crystal structure of a multidomain protease inhibitor (HAI-1) reveals the mechanism of its auto-inhibition. Journal of Biological Chemistry, 292(20), 8412-8423. https://doi.org/10.1074/jbc.M117.779256
Møller, I. M., Havelund, J. & Rogowska-Wrzesinska, A. (2017). Protein carbonylation in plants. In J. Ros (Ed.), Protein Carbonylation: Principles, Analysis, and Biological Implications (pp. 321-339). Wiley. https://doi.org/10.1002/9781119374947.ch13
Bocchio, M., Nabavi, S. & Capogna, M. (2017). Synaptic Plasticity, Engrams, and Network Oscillations in Amygdala Circuits for Storage and Retrieval of Emotional Memories. Neuron, 94(4), 731-743. https://doi.org/10.1016/j.neuron.2017.03.022
Azouaoui, H., Montigny, C., Dieudonné, T., Champeil, P., Jacquot, A., Vázquez-Ibar, J. L., le Maréchal, P., Ulstrup, J., Ash, M.-R., Lyons, J. A., Nissen, P. & Lenoir, G. (2017). A High and Phosphatidylinositol-4-phosphate (PI4P)-dependent ATPase Activity for the Drs2p/Cdc50p Flippase after Removal of its N- and C-terminal Extensions. Journal of Biological Chemistry, 292(19), 7954-7970. https://doi.org/10.1074/jbc.M116.751487
Taschner, M., Mourao, A., Awasthi, M., Basquin, J. & Lorentzen, E. (2017). Structural basis of outer dynein arm intraflagellar transport by the transport adaptor protein ODA16 and the intraflagellar transport protein IFT46. Journal of Biological Chemistry, 292(18), 7462-7473. https://doi.org/10.1074/jbc.M117.780155
Tesauro, C., Ferrando, B., Ma, X., Jepsen, M. L., Ivarsen, A. K., Frohlich, R., Stevnsner, T., Knudsen, B. R. & Ho, Y. P. (2017). Isolation of functional mitochondria by inertial microfluidics - a new method to sort intracellular organelles from a small scale biological sample. R S C Advances, 7(38), 23735-23741. https://doi.org/10.1039/c7ra03384b

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Lisbeth Heilesen