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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 4651 to 62 out of 62

Peer-reviewed publications at MBG - all years

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Kjeldsen, F., Haselmann, K. F., Budnik, B. A., Sørensen, E. S. & Zubarev, R. A. (2003). Complete characterization of post-translational modification sites in the bovine milk protein PP3 by tandem mass spectrometry with electron capture dissociation as the last stage. Analytical Chemistry, 75, 2355-2361.

Overgaard, M. T., Sørensen, E. S., Stachowiak, D., Boldt, H. B., Kristensen, L., Sottrup-Jensen, L. & Oxvig, C. (2003). Complex of pregnancy-associated plasma protein-A and the proform of the eosiniphil major basic protein: Disulphide structure and carbohydrate attachment. Journal of Biological Chemistry, 278, 2106-2117.

Brodal, G. S., Fagerberg, R., Östlin, A., Pedersen, C. N. S. & Rao, S. S. (2003). Computing Refined Buneman Trees in Cubic Time. In G. Benson & R. Page (Eds.), Algorithms in Bioinformatics: Third International Workshop, WABI 2003, Budapest, Hungary, September 15-20, 2003. Proceedings (pp. 259-270). Springer. https://doi.org/10.1007/978-3-540-39763-2_20

Brodal, G. S., Fagerberg, R. & Pedersen, C. N. S. (2003). Computing the Quartet Distance Between Evolutionary Trees in Time O(n log n). Algorithmica, 38(2), 377-395. https://doi.org/10.1007/s00453-003-1065-y

Hartmann, R., Justesen, J., Sarkar, S. N., Sen, G. C. & Yee, V. C. (2003). Crystal structure of the 2′-specific and double-stranded RNA-activated interferon-induced antiviral protein 2′-5′-oligoadenylate synthetase. Mol. Cell., 12, 1173-1185.

Kjeldsen, F., Haselmann, K. F., Sørensen, E. S. & Zubarev, R. A. (2003). Distinguishing of Ile/Leu amino acid residues in the PP3 protein by (hot) electron capture dissociation in Fourier transform ion cyclotron resonance mass spectrometry. Analytical Chemistry, 75, 1267-1274.

Charlesworth, D., Mable, B. K., Schierup, M. H., Bartolomé, C., Awadalla, P. & Schierup, M. H. (2003). Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata. Genetics, 164, 1519-1535.

Mable, B. K., Schierup, M. H. & Charlesworth, D. (2003). Estimating the number, frequency, and dominance of S-alleles in a natural population of Arabidopsis lyrata (Brassicaceae) with sporophytic control of self-incompatibility. Iden, 90, 422-431. http://www.nature.com/hdy

Hercus, M., Loeschcke, V. & Rattan, S. (2003). Extension of longevity of Drosophila by repeated mild heat stress exposures. Biogerontology, 4, 149-156.

Christiansen, M., Stevnsner, T., Modin, C., Martensen, P. M., Brosh Jr., R. M. & Bohr, V. (2003). Functional consequences of mutations in the conserved SF2 motifs and posttranslational phosphorylation of the CSB protein. Nucl. Acids Res., 31, 963-973.

Karring, H., Björnsson, A., Thirup, S., Clark, B. F. C. & Knudsen, C. R. (2003). Functional effects of deleting the coiled-coil motif in Escherichia coli elongation factor Ts. FEBS journal, 270, 4294-4305.

Pedersen, J. S. & Hein, J. (2003). Gene finding with a hidden Markov model of genome structure and evolution. Bioinformatics, 19(2), 219-27.

Charlesworth, D., Bartolomé, C., Schierup, M. H. & Mable, B. K. (2003). Haplotype structure of the stigmatic self-incompatibility gene in natural populations of Arabidopsis lyrata. Mol. Biol. Evol., 20(11), 1741-1753.

Bjerring, M., Rasmussen, J. T., Krogshave, R. S. & Nielsen, N. C. (2003). Heteronuclear coherence transfer in solid-state NMR using a γ-encoded transferred echo experiment. Journal of Chemical Physics, 119, 8916-8926.

Minois, N., Rattan, S. & Rattan, S. (Ed.) (2003). Hormesis in aging. In Modulating Aging and Longevity (pp. 127-137). Kluwer Academic Publishers.

Fedosov, S., Laursen, N. B., Moestrup, S. K., Nexø, E., Petersen, T. E., Jensen, E. Ø. & Berglund, L. (2003). Human intrinsic factor expressed in the plant Arabidopsis thaliana. FEBS journal, (270), 3362-3367.

Mathu, S. G., Knudsen, C. R., van Duin, J. & Kraal, B. (2003). Isolation of Qbeta polymerase complexes containing mutant species of elongation factor Tu. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci., 786, 279-286.

Gilbert, G. E., Shi, J., Rasmussen, J. T., Heegaard, C. W., Zhao, J. & Price, P. (2003). Limited exposure of phosphatidylserine on stimulated platelets is necessary for procoagulant activity and provides binding sites for lactadherin. J. Thromb. Haem., Supplement(1), -.

Backes, G., Madsen, L. H., Stougaard, J. & Jahoor, A. (2003). Localisation of genes for resistance against Blumeria graminis f.sp. hordei and Puccinia graminis in a cross between a barley cultivar and a wild barley (Hordeum vulgare ssp. spontaneum) line. Theoretical and Applied Genetics, 106, 353-362.

Chen, B. K., Leiferman, K. M., Pittelkow, M. R., Overgaard, M. T., Oxvig, C. & Conover, C. A. (2003). Localization and regulation of pregnancy-associated plasma protein a expressionin healing human skin. Journal of Clinical Endocrinology and Metabolism, 88, 4465-4471.

Jensen, A., Calvayrac, G., Karahalil, B., Bohr, V. & Stevnsner, T. (2003). Mammalian OGG1 incises 8-oxoadenine opposite cytosine in nuclei and mitochondria, while a different glycosylase incises 8-oxoadenine opposite guanine in nuclei. Journal of Biological Chemistry, 278, 19541-19548.

Bødker, J. S., Wind, T., Jensen, J. K., Hansen, M., Pedersen, K. E. & Andreasen, P. A. (2003). Mapping of the epitope for a monoclonal anti-plasminogen activator inhibitor-1 antibody protecting against inactivating agents. FEBS journal, 270, 1672-1679.

Pallesen, L. T. & Rasmussen, J. T. (2003). MUC15, et hidtil ukendt protein. Maelkeritidende.

Wind, T., Jensen, J. K., Dupont, D. M., Kulig, P. & Andreasen, P. A. (2003). Mutational analysis of plasminogen activator inhibitor-1. Interactions of a-helix F and its neighbouring structural elements regulates the activity and the rate of latency transition. FEBS journal, 270, 1680-1688.

Villesen, P. & Boomsma, JJ. (2003). Patterns of male parentage in the fungus-growing ants. Behavioral Ecology and Sociobiology, 53(4), 246-253.

Brodersen, D. E., Clemons, Jr., W. M., Carter, A. P., Wimberly, B. T. & Ramakrishnan, V. (2003). Phasing the 30S ribosomal subunit structure. Acta Crystallographica. Section D: Biological Crystallography, D59, 2044-2050.

Chikamori, K., Grabowski, D. R., Kinter, M., Willard, B. B., Yadav, S., Aebersold, R. H., Bukowski, R. M., Hickson, I. D., Andersen, A. H., Ganapathi, R. & Ganapathi, M. K. (2003). Phosphorylation of serine 1106 in the catalytic domain of topoisomerase II alpha regulates enzymatic activity and drug sensitivity. Journal of Biological Chemistry, 278, 12696-12702.

Petersen, S. V., Valnickova, Z. & Enghild, J. J. (2003). Pigment-epithelium-derived factor (PEDF) occurs at a physiologically relevant concentration in human blood: purification and characterization. Biochemical Journal, 374, 199-206.

Radutoiu, E. S., Madsen, L. H., Madsen, E. B., Felle, H., Umehara, Y., Grønlund, M., Sato, S., Nakamura, Y., Tabata, S., Sandal, N. N. & Stougaard, J. (2003). Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases. Nature, 425, 585-592.

Hoffmann, H. J., Iversen, M., Brandslund, I., Sigsgaard, T., Omland, Ø., Oxvig, C., Holmskov, U., Bjermer, L., Jensenius, J. C. & Dahl, R. (2003). Plasma C3d levels of young farmers correlate with respirable dust exposure levels during normal work in swine confinement buildings. Annals of Agricultural and Environmental Medicine, 10(1), 53-60.

Pedersen, K. E., Einholm, A. P., Christensen, A., Schack, L., Wind, T., Kenney, J. M. & Andreasen, P. A. (2003). Plasminogen activator inhibitor-1 polymers, induced by inactivating amphipathic organochemical ligands. Biochemical Journal, 372, 747-755.

Pedersen, K. E., Einholm, A. P., Christensen, A., Schack, L., Wind, T., Kenney, J. M. & Andreasen, P. A. (2003). Plasminogen activator inhibitor-1 polymers, induced by inactivating amphipathic organochemical ligands. Biochemical Journal, 372(Pt 3), 747-55. https://doi.org/10.1042/BJ20021868

Monget, P., Mazerbourg, S., Delpuech, T., Maurel, M. C., Maniere, S., Zapf, J., Lalmanach, G., Oxvig, C. & Overgaard, M. T. (2003). Pregnancy-associated plasma protein-A is involved in insulin-like growth factor binding protein-2 (IGFBP-2) proteolytic degradation in bovine and porcine preovulatory follicles: identification of cleavage site and. Biology of Reproduction, 68, 77-86.

Vanzi, F., Vladimirov, S., Knudsen, C. R., Goldman, Y. E. & B.S., C. (2003). Protein synthesis by single ribosomes. RNA, 9, 1174-1179.

Köster, M., Lykke-Andersen, S., Elnakady, Y. A., Gerth, K., Washausen, P., Höfle, G., Sasse, F., Kjems, J. & Hauser, H. (2003). Ratjadones inhibit nuclear export by blocking CRM1/exportin 1. Experimental Cell Research, 286(2), 321-331. https://doi.org/10.1016/S0014-4827(03)00100-9

Bor, M. V., Fedosov, S., Laursen, N. B. & Nexø, E. (2003). Recombinant human intrinsic factor expressed in plants is suitable for measurement of vitamin B-12. Clinical chemistry, 49, 2081-2083.

Andersen, F. F., Andersen, K. E., Kusk, M., Frøhlich, R. F., Westergaard, O., Andersen, A. H. & Knudsen, B. R. (2003). Recombinogenic flap ligation mediated by human topoisomerase I. Journal of Molecular Biology.

Laursen, L. V., Bjergbæk, L., Murray, J. M. & Andersen, A. H. (2003). RecQ helicases and topoisomerase III in cancer and aging. Biogerontology, 4, 275-287.

Hein, J., Jensen, J. L. & Pedersen, C. N. S. (2003). Recursions for statistical multiple alignment. Proceedings of the National Academy of Sciences (PNAS), 100(25), 14960-14965. https://doi.org/10.1073/pnas.2036252100

Hanford, LE., Fattman, CL., Shaefer, LM., Enghild, J. J., Valnickova, Z. & Oury, TD. (2003). Regulation of receptor for advanced glycation end products during bleomycin-induced lung injury. Am J Respir Cell Mol Biol.

Richman, A. D., Herrera, L. G., Nash, D. & Schierup, M. H. (2003). Relative roles of mutation and recombination in generating allelic polymorphism at an MHC class II locus in Peromyscus maniculatus. Genetetical Research, Camb, 82, 89-99.

Laursen, L. V., Ampatzidou, E., Andersen, A. H. & Murray, J. M. (2003). Role for the fission yeast RecQ helicase in DNA repair in G(2). Molecular and Cellular Biology, 23, 3692-3705.

Vanwetswinkel, S., Kriek, J., Andersen, G. R., Guntert, P., Dijk, J., Canters, G. W. & Siegal, G. (2003). Solution structure of the 162 residue C-terminal domain of human elongation factor 1Bgamma. Journal of Biological Chemistry, 278, 43443-43451.

Vanwetswinkel, S., Kriek, J., Andersen, G. R., Dijk, J. & Siegal, G. (2003). ¹H, ¹⁵N and ¹³C resonance assignments of the highly conserved 19 dKa C-terminal domain from human elongation factor 1B gamma. J. Biomol., 26, 189-190.

Westergaard, U. B., Andersen, M. H., Heegaard, C. W., Fedosov, S. N. & Petersen, T. E. (2003). Tetranectin binds hepatocyt growth factor and tissue-type plasminogen activator. FEBS journal, 270, 1850-1854.

Freund, M., Kammler, S., Krummheuer, J., Hipp, M., Meyer, I., Gierling, W., Theiss, S., Preuss, T., Kjems, J. & Schaal, H. (2003). The 5′ splice site consensus: hydrogen bonding pattern or nucleotide frequency? Nucl. Acid Res., 31, 6963-6975.

Jeppesen, M. G., Ortiz, P., Shepard, W., Kinzy, T.-G., Nyborg, J. & Andersen, G. R. (2003). The crystal structure of the glutathione S-transferase-like domain of elongation factor lBgamma from Saccharomyces cerevisiae. Journal of Biological Chemistry, 278, 47190-47198.

Petersen, S. V., Oury, T. D., Valnickova, Z., Thøgersen, I. B., Højrup, P., Crapo, J. D. & Enghild, J. J. (2003). The dual nature of human extracellular superoxide dismutase: one sequence and two structures. Proceedings of the National Academy of Sciences (PNAS), 100, 13875-13880.

Grønlund, M., Gustafsen, C., Jensen, D. B., Nielsen, L. P., Marcker, K. A. & Jensen, E. Ø. (2003). The Lotus japonicus ndx gene family is involved in nodule function and maintenance. Plant Molecular Biology, 52(2), 303-316. https://doi.org/10.1023/A:1023967214199

Borisov, A. Y., Madsen, L. H., Tsyganov, V. E., Umehara, Y., Voroshilova, V. A., Batagov, A. O., Sandal, N. N., Mortensen, A., Schauser, L., Ellis, N., Tikhonovich, I. A. & Stougaard, J. (2003). The Sym35 gene required for root nodule development in Pisum sativum is an ortholog of Nin from Lotus japonicus. Plant Physiology, 131, 1009-1017.

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Lisbeth Heilesen