Cabré, E.
, Malmström, J., Sutherland, D., Perez-Gil, J.
& Otzen, D. (2009).
Surfactant protein SP-B strongly modifies surface collapse of phospholipid vesicles: Insights from a quartz crystal microbalance with dissipation.
Biophysical Journal,
97(3), 768-76.
https://doi.org/10.1016/j.bpj.2009.04.057Troeberg, L., Fushimi, K., Scilabra, S. D., Nakamura, H., Dive, V., Thøgersen, I. B.
, Enghild, J. J. & Nagase, H. (2009).
The C-terminal domains of ADAMTS-4 and ADAMTS-5 promote association with N-TIMP-3.
Matrix Biology,
28(8), 463-9.
https://doi.org/10.1016/j.matbio.2009.07.005Gao, S., Dagnæs-Hansen, F., Nielsen, E. J. B., Wengel, J.
, Besenbacher, F., Howard, K. A. & Kjems, J. (2009).
The effect of chemical modification and nanoparticle formulation on stability and biodistribution of siRNA in mice.
Molecular Therapy,
17(7), 1225-1233.
https://doi.org/10.1038/mt.2009.91
Dam, S., Laursen, B. S., Ornfelt, J. H.
, Jochimsen, B., Stærfeldt, H. H., Friis, C., Nielsen, K., Goffard, N., Besenbacher, S.
, Krusell, L., Sato, S., Tabata, S.
, Thøgersen, I., Enghild, J. J. & Stougaard, J. (2009).
The proteome of seed development in the model legume Lotus japonicus.
Plant Physiology.
https://doi.org/10.1104/pp.108.133405
Bendsen, S. P., Østergaard, V. H., Skouboe, C., Brinch, M., Knudsen, B. R. & Andersen, A. H. (2009).
The QTK-loop is Essential for the Communication Between the N-terminal ATPase Domain and the Central Cleavage/Ligation Domain in Human Topoisomerase IIα.
Biochemistry, 6508-15.
Andersen, K., Oliveira, C. L. P. D., Larsen, K. L., Poulsen, F., Callisen, T., Westh, P.
, Pedersen, J. S. & Otzen, D. (2009).
The role of decorated SDS micelles in sub-cmc protein denaturation and association.
Journal of Molecular Biology,
391, 207-226.
Aggad, D., Mazel, M., Boudinot, P., Mogensen, K. E.
, Hamming, O. J., Hartmann, R., Kotenko, S., Herbomel, P., Lutfalla, G. & Levraud, J.-P. (2009).
The two groups of zebrafish virus-induced interferons signal via distinct receptors with specific and shared chains.
Journal of Immunology,
183(6), 3924-31.
https://doi.org/10.4049/jimmunol.0901495Grassinger, J., Haylock, D. N., Storan, M. J., Heines, G. O., Williams, B., Whitty, G. A., Vinson, A. R., Be, C. L., Li, S.
, Sørensen, E. S., Tam, P. PL., Denhardt, D. T., Sheppard, D., Choong, P. F. & Nilsson, S. K. (2009).
Thrombin cleaved osteopontin regulates hemopoietic stem and progenitor cell functions through interactions with {alpha}9{beta}1 and {alpha}4{beta}1 integrins.
Blood,
114(1), 49-59.
Nielsen, J. T., Bjerring, M., Jeppesen, M., Pedersen, R. O.
, Pedersen, J. M., Hein, K. L., Vosegaard, T., Skrydstrup, T., Otzen, D. & Nielsen, N. C. (2009).
Unique identification of supramolecular structures in amyloid fibrils by solid-state NMR spectroscopy.
Angewandte Chemie International Edition,
48, 2118-2121.
Hvidtjørn, D., Grove, J., Schendel, D., Schieve, L. A.
, Ernst, E., Olsen, J. & Thorsen, P. (2009).
Validation of self-reported data on assisted conception in The Danish National Birth Cohort.
Human Reproduction,
24(9), 2332-40.
https://doi.org/10.1093/humrep/dep179
Lauritsen, M. B., Jørgensen, M., Madsen, K. M.
, Lemcke, S., Toft, S., Grove, J., Schendel, D. & Thorsen, P. (2009).
Validity of Childhood Autism in the Danish Psychiatric Central Register: Findings from a Cohort Sample Born 1990-1999.
Journal of Autism and Developmental Disorders,
40(2), 139-148.
https://doi.org/10.1007/s10803-009-0818-0
Jordal, P. B.
, Dueholm, M. S., Larsen, P.
, Petersen, S. V., Enghild, J. J., Christiansen, G., Højrup, P., Nielsen, P. H. & Otzen, D. E. (2009).
Widespread abundance of functional bacterial amyloid in mycolata and other gram-positive bacteria.
Applied and Environmental Microbiology,
75(12), 4101-10.
https://doi.org/10.1128/AEM.02107-08Jensen, P. L., Dueholm, M. S., Larsen, P.
, Petersen, S. V., Enghild, J. J., Christiansen, G., Højrup, P., Nielsen, P. H.
& Otzen, D. (2009).
Widespread abundance of Functional Bacterial Amyloid in Mycolata and other Gram positive Bacteria.
Applied and Environmental Microbiology,
75, 4101-4110.
Preker, P., Nielsen, J., Kammler, S., Lykke-Andersen, S., Christensen, M. S., Mapendano, C. K., Schierup, M. H. & Jensen, T. H. (2008).
RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters.
Science,
322(5909), 1851-1854.
https://doi.org/10.1126/science.1164096
Krejci, P., Salazar, L., Kashiwada, T. A., Chlebova, K.
, Salasova, A., Thompson, L. M., Bryja, V., Kozubik, A. & Wilcox, W. R. (2008).
Analysis of STAT1 activation by six FGFR3 mutants associated with skeletal dysplasia undermines dominant role of STAT1 in FGFR3 signaling in cartilage.
PLoS One,
3(12), Article e3961.
https://doi.org/10.1371/journal.pone.0003961Sanggaard, K. W., Sonne-Schmidt, C. S., Hansen, T. P. K., Kristensen, T., Wisniewski, H.-G.
, Thøgersen, I. B. & Enghild, J. J. (2008).
TSG-6 transfers proteins between glycosaminoglycans via a Ser28-mediated covalent catalytic mechanism.
Journal of Biological Chemistry,
283(49), 33919-26.
https://doi.org/10.1074/jbc.M804240200
Sato, T., Kurihara, Y., Asai, R.
, Kawamura, Y., Tonami, K., Uchijima, Y., Heude, E., Ekker, M., Levi, G. & Kurihara, H. (2008).
An endothelin-1 switch specifies maxillomandibular identity.
Proceedings of the National Academy of Sciences of the United States of America,
105(48), 18806-11.
https://doi.org/10.1073/pnas.0807345105Watanabe, T., Sato, T., Amano, T.
, Kawamura, Y., Kawamura, N., Kawaguchi, H., Yamashita, N., Kurihara, H. & Nakaoka, T. (2008).
Dnm3os, a non-coding RNA, is required for normal growth and skeletal development in mice.
Developmental Dynamics,
237(12), 3738-48.
https://doi.org/10.1002/dvdy.21787Kamei, H., Lu, L., Jiao, S., Li, Y.
, Nielsen, C. G., Laursen, L. S., Oxvig, C., Zhou, J. & Duan, C. (2008).
Duplication and Diversification of the Hypoxia-Inducible IGFBP-1 Gene in Zebrafish.
PLoS One,
3(8), e3091.
https://doi.org/10.1371/journal.pone.0003091Fäith, M., Savitski, M. M.
, Nielsen, M. L., Kjeldsen, F., Andren, P. E. & Zubarev, R. A. (2008).
Analytical utility of small neutral losses from reduced species in electron capture dissociation studied using SwedECD database.
Analytical Chemistry,
80(21), 8089-8094.
https://doi.org/10.1021/ac800944uAssenholt, J., Mouaikel, J.
, Andersen, K. R., Brodersen, D. E., Libri, D.
& Jensen, T. H. (2008).
Exonucleolysis is required for nuclear mRNA quality control in yeast THO mutants.
RNA,
14(11), 2305-13.
https://doi.org/10.1261/rna.1108008
De Godoy, L. M. F., Olsen, J. V., Cox, J.
, Nielsen, M. L., Hubner, N. C., Fröhlich, F., Walther, T. C. & Mann, M. (2008).
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast.
Nature,
455(7217), 1251-1254.
https://doi.org/10.1038/nature07341Munch, K., Boomsma, W., Huelsenbeck, J. P., Willerslev, E.
& Nielsen, R. (2008).
Statistical assignment of DNA sequences using Bayesian phylogenetics.
Systematic Biology,
57(5), 750-757.
https://doi.org/10.1080/10635150802422316
Truhlar, S. M. E., Cervantes, C. F., Torpey, J. W.
, Kjærgaard, M. & Komives, E. A. (2008).
Rapid mass spectrometric analysis of 15N-Leu incorporation fidelity during preparation of specifically labeled NMR samples.
Protein Science,
17(9), 1636-9.
https://doi.org/10.1110/ps.036418.108Sanggaard, K. W., Sonne-Schmidt, C. S., Hansen, T. P. K., Lorentzen, K. A., Wisniewski, H.-G.
, Thøgersen, I. B. & Enghild, J. J. (2008).
The transfer of heavy chains from bikunin proteins to hyaluronan requires both TSG-6 and HC2.
Journal of Biological Chemistry,
283(27), 18530-18537.
https://doi.org/10.1074/jbc.M800874200
Pauluhn, A.
, Ahmed, H., Lorentzen, E., Buchinger, S., Schomburg, D., Siebers, B. & Pohl, E. (2008).
Crystal structure and stereochemical studies of KD(P)G aldolase from Thermoproteus tenax.
Proteins,
72(1), 35-43.
Nygaard, J. V., Andersen, M. Ø., Howard, K. A., Foss, M., Bünger, C., Kjems, J. & Besenbacher, F. (2008).
Investigation of particle-functionalized tissue engineering scaffolds using X-ray tomographic microscopy.
Biotechnology and Bioengineering (Print),
100(4), 820-9.
https://doi.org/10.1002/bit.21796
Fredslund, F., Laursen, N. S., Roversi, P.
, Jenner, L. B., Oliveira, C. L. P., Pedersen, J. S., Nunn, M. A., Lea, S. M., Discipio, R.
, Sottrup-Jensen, L. & Andersen, G. R. (2008).
Structure of and influence of a tick complement inhibitor on human complement component 5.
Nature Immunology,
9(7), 753-60.
https://doi.org/10.1038/ni.1625
Thomasen, J. R., Guldbrandtsen, B., Sørensen, P., Thomsen, B. & Lund, M. S. (2008).
Quantitative Trait Loci Affecting Calving Traits in Danish Holstein Cattle.
Journal of Dairy Science,
91(5), 2098-2105.
https://doi.org/10.3168/jds.2007-0602
Zubarev, R. A.
, Nielsen, M. L., Fung, E. M., Savitski, M. M., Kel-Margoulis, O., Wingender, E. & Kel, A. (2008).
Identification of dominant signaling pathways from proteomics expression data.
Journal of Proteomics,
71(1), 89-96.
https://doi.org/10.1016/j.jprot.2008.01.004Thomsen, R., Saguez, C., Nasser, T. & Jensen, T. H. (2008).
General, rapid, and transcription-dependent fragmentation of nucleolar antigens in S. cerevisiae mRNA export mutants.
RNA,
4, 706-716.
https://doi.org/10.1261/rna.718708
Lorentzen, E., Basquin, J., Tomecki, R., Dziembowski, A. & Conti, E. (2008).
Structure of the active subunit of the yeast exosome core, Rrp44: diverse modes of substrate recruitment in the RNase II nuclease family.
Mol. Cell.,
29(6), 717-728.
Ank, N., Iversen, M. B., Bartholdy, C., Staeheli, P.
, Hartmann, R., Jensen, U. B., Dagnæs-Hansen, F., Thomsen, A., Chen, Z., Haugen, H., Klucher, K.
& Paludan, S. R. (2008).
An Important Role for Type III Interferon (IFN-l/IL-28) in TLR-Induced Antiviral Activity.
Journal of Immunology,
180(4), 2474-2485.
https://doi.org/10.4049/jimmunol.180.4.2474
