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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 4801 to 136 out of 136

Peer-reviewed publications at MBG - all years

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Andersen, E. S., Jeeninga, R. E., Damgaard, C. K., Berkhout, B. & Kjems, J. (2003). Dimerization and template switching in the 5' untranslated region between various subtypes of human immunodeficiency virus type 1. Journal of Virology, 77(5), 3020-30. https://doi.org/10.1128/JVI.77.5.3020-3030.2003

Vega, M. C., Lorentzen, E., Linden, A. & Wilmanns, M. (2003). Evolutionary markers in the (β/α)₈-barrel fold. Current Opinion in Chemical Biology, 7(6), 694-701. https://doi.org/10.1016/j.cbpa.2003.10.004

Otzen, D. E. (2003). Folding of DsbB in mixed micelles: a kinetic analysis of the stability of a bacterial membrane protein. Journal of Molecular Biology, 330(4), 641-649. https://doi.org/10.1016/S0022-2836(03)00624-7

Rattan, S., Kaul, S. (Ed.) & Wadhwa, R. (Ed.) (2003). Aging outside the body: usefulness of the Hayflick system. In Aging of Cells Inside and Outside the Body (pp. 1-8). Kluwer Academic Publishers.

Skouboe, C., Bjergbæk, L., Østergaard, V., Larsen, M. K., Knudsen, B. R. & Andersen, A. H. (2003). A human topoisomerase IIα heterodimer with only one ATP binding site can go through successive catalytic cycles. Journal of Biological Chemistry, 278, 5768-5774.

Hansen, J., Floss, T., van Sloun, P., Füchtbauer, E.-M., Vauti, F., Arnold, H., Schnütgen, F., Wurst, W., von Melchner, H. & Ruiz, P. (2003). A large scale gene-driven mutagenesis approach for functional analysis of the mouse genome. Proceedings of the National Academy of Sciences (PNAS), 100, 9918-9922.

Kashiwagi, M., Enghild, J. J., Gendron, C., Hughes, C., Caterson, B., Itoh, Y. & Nagase, H. (2003). Altered proteolytic activities of ADAMTS-4 expressed by C-terminal processing. Journal of Biological Chemistry, -.

Smidt, K. C. J., Hansen, L. L., Søgaard, T. M. M., Petersen, L. K., Knudsen, U. B. & Martensen, P. M. (2003). A nine nucleotide deletion and splice variation of the coding region of the interferon induced ISG12 gene. B B A - Molecular Basis of Disease, 1638, 227-234.

Madsen, E. B., Madsen, L. H., Radutoiu, S., Olbryt, M., Rakwalska, M., Szczyglowski, K., Sato, S., Kaneko, T., Tabata, S., Sandal, N. & Stougaard, J. (2003). A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals. Nature, 425(6958), 637-40. https://doi.org/10.1038/nature02045

Madsen, E. B., Madsen, L. H., Radutoiu, S., Olbryt, M., Rakwalska, M., Szczyglowski, K., Kaneko, T., Sato, S., Tabata, S., Sandal, N. & Stougaard, J. (2003). A receptor-like kinase gene involved in legume perception of rhizobial signal molecules. Nature, 425, 637-640.

Pacios-Bras, C., Schlamann, H. R. M., Boot, K., Admiraal, P., Langerak, J. M., Stougaard, J. & Spaink, H. P. (2003). Auxin distribution in Lotus japonicus during root nodule development. Plant Mol. Biol., 52, 1169-1180.

Madsen, L. H., Collins, N. C., Rakwalska, M., Backes, G., Sandal, N., Krusell, L., Jensen, J., Waterman, E. H., Jahoor, A., Yaliffe, M., Pryor, A. J., Langridge, P., Schultze-Lefert, P. & Stougaard, J. (2003). Barley disease resistance gene analoges of the NBS-LRR class: identification and mapping. Mol. Gen. Genet ., 269, 150-161.

Gils, A., Pedersen, K. E., Skottrup, P., Christensen, A., Naessens, D., Deinum, J., Enghild, J. J., Declerck, P. J. & Andreasen, P. A. (2003). Biochemical importance of glycosylation of plasminogen activator inhibitor-1. Thromb. Haemost., 90, 206-217.

Einholm, A. P., Pedersen, K. E., Wind, T., Kulig, P., Overgaard, M. T., Jensen, J. K., Bødker, J. S., Christensen, A., Charlton, P. & Andreasen, P. A. (2003). Biochemical mechanism of action of a diketopiperazine inactivator of plasminogen activator inhibitor-1. Biochemical Journal, 373(Pt 3), 723-32. https://doi.org/10.1042/BJ20021880

Rattan, S. (2003). Biology of aging and possibilities of gerontomodulation. Proc. Ind. Nat. Sci. Acad., B69, 157-164.

Eskildsen, S., Justesen, J., Schierup, M. H. & Hartmann, R. (2003). Characterization of the 2'-5'-oligoadenylate synthetase ubiquitin-like family. Nucleic Acids Research, 31(12), 3166-3173.

Eskildsen, S., Justesen, J., Schierup, M. H. & Hartmann, R. (2003). Characterization of the 2′-5′-oligoadenylate synthetase ubiquitin-like family. Nucl. Acids Res., 31, 3166-3173.

Madsen, L. B., Petersen, A. H., Nielsen, V. H., Nissen, P. H., Dunø, M., Krejci, L., Bendixen, C. & Thomsen, B. (2003). Chromosome location, genomic organization of the porcine COL10A1 gene and model structure of the NC1 domain. Cytogenetic and Genome Research, 102(1-4), 173-178. http://content.karger.com/ProdukteDB/produkte.asp?Aktion=ShowAbstract&ArtikelNr=75744&Ausgabe=229862&ProduktNr=224037

Nissen, P. H., Thomsen, B., Offenberg, H., Thomsen, P. D. & Bendixen, C. (2003). Cloning and characterization of the bovine EGR4 gene and evaluation as candidate gene for bovine spinal dysmyelination. Animal Genetics, 34(2), 124-131. https://doi.org/10.1046/j.1365-2052.2003.00969.x

Kjeldsen, F., Haselmann, K. F., Budnik, B. A., Sørensen, E. S. & Zubarev, R. A. (2003). Complete characterization of post-translational modification sites in the bovine milk protein PP3 by tandem mass spectrometry with electron capture dissociation as the last stage. Analytical Chemistry, 75, 2355-2361.

Overgaard, M. T., Sørensen, E. S., Stachowiak, D., Boldt, H. B., Kristensen, L., Sottrup-Jensen, L. & Oxvig, C. (2003). Complex of pregnancy-associated plasma protein-A and the proform of the eosiniphil major basic protein: Disulphide structure and carbohydrate attachment. Journal of Biological Chemistry, 278, 2106-2117.

Brodal, G. S., Fagerberg, R., Östlin, A., Pedersen, C. N. S. & Rao, S. S. (2003). Computing Refined Buneman Trees in Cubic Time. In G. Benson & R. Page (Eds.), Algorithms in Bioinformatics: Third International Workshop, WABI 2003, Budapest, Hungary, September 15-20, 2003. Proceedings (pp. 259-270). Springer. https://doi.org/10.1007/978-3-540-39763-2_20

Brodal, G. S., Fagerberg, R. & Pedersen, C. N. S. (2003). Computing the Quartet Distance Between Evolutionary Trees in Time O(n log n). Algorithmica, 38(2), 377-395. https://doi.org/10.1007/s00453-003-1065-y

Hartmann, R., Justesen, J., Sarkar, S. N., Sen, G. C. & Yee, V. C. (2003). Crystal structure of the 2′-specific and double-stranded RNA-activated interferon-induced antiviral protein 2′-5′-oligoadenylate synthetase. Mol. Cell., 12, 1173-1185.

Kjeldsen, F., Haselmann, K. F., Sørensen, E. S. & Zubarev, R. A. (2003). Distinguishing of Ile/Leu amino acid residues in the PP3 protein by (hot) electron capture dissociation in Fourier transform ion cyclotron resonance mass spectrometry. Analytical Chemistry, 75, 1267-1274.

Charlesworth, D., Mable, B. K., Schierup, M. H., Bartolomé, C., Awadalla, P. & Schierup, M. H. (2003). Diversity and linkage of genes in the self-incompatibility gene family in Arabidopsis lyrata. Genetics, 164, 1519-1535.

Mable, B. K., Schierup, M. H. & Charlesworth, D. (2003). Estimating the number, frequency, and dominance of S-alleles in a natural population of Arabidopsis lyrata (Brassicaceae) with sporophytic control of self-incompatibility. Heredity, 90, 422-431. http://www.nature.com/hdy

Hercus, M., Loeschcke, V. & Rattan, S. (2003). Extension of longevity of Drosophila by repeated mild heat stress exposures. Biogerontology, 4, 149-156.

Christiansen, M., Stevnsner, T., Modin, C., Martensen, P. M., Brosh Jr., R. M. & Bohr, V. (2003). Functional consequences of mutations in the conserved SF2 motifs and posttranslational phosphorylation of the CSB protein. Nucl. Acids Res., 31, 963-973.

Karring, H., Björnsson, A., Thirup, S., Clark, B. F. C. & Knudsen, C. R. (2003). Functional effects of deleting the coiled-coil motif in Escherichia coli elongation factor Ts. FEBS journal, 270, 4294-4305.

Pedersen, J. S. & Hein, J. (2003). Gene finding with a hidden Markov model of genome structure and evolution. Bioinformatics, 19(2), 219-27.

Charlesworth, D., Bartolomé, C., Schierup, M. H. & Mable, B. K. (2003). Haplotype structure of the stigmatic self-incompatibility gene in natural populations of Arabidopsis lyrata. Mol. Biol. Evol., 20(11), 1741-1753.

Bjerring, M., Rasmussen, J. T., Krogshave, R. S. & Nielsen, N. C. (2003). Heteronuclear coherence transfer in solid-state NMR using a γ-encoded transferred echo experiment. Journal of Chemical Physics, 119, 8916-8926.

Minois, N., Rattan, S. & Rattan, S. (Ed.) (2003). Hormesis in aging. In Modulating Aging and Longevity (pp. 127-137). Kluwer Academic Publishers.

Fedosov, S., Laursen, N. B., Moestrup, S. K., Nexø, E., Petersen, T. E., Jensen, E. Ø. & Berglund, L. (2003). Human intrinsic factor expressed in the plant Arabidopsis thaliana. FEBS journal, (270), 3362-3367.

Mathu, S. G., Knudsen, C. R., van Duin, J. & Kraal, B. (2003). Isolation of Qbeta polymerase complexes containing mutant species of elongation factor Tu. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci., 786, 279-286.

Gilbert, G. E., Shi, J., Rasmussen, J. T., Heegaard, C. W., Zhao, J. & Price, P. (2003). Limited exposure of phosphatidylserine on stimulated platelets is necessary for procoagulant activity and provides binding sites for lactadherin. J. Thromb. Haem., Supplement(1), -.

Backes, G., Madsen, L. H., Stougaard, J. & Jahoor, A. (2003). Localisation of genes for resistance against Blumeria graminis f.sp. hordei and Puccinia graminis in a cross between a barley cultivar and a wild barley (Hordeum vulgare ssp. spontaneum) line. Theoretical and Applied Genetics, 106, 353-362.

Chen, B. K., Leiferman, K. M., Pittelkow, M. R., Overgaard, M. T., Oxvig, C. & Conover, C. A. (2003). Localization and regulation of pregnancy-associated plasma protein a expressionin healing human skin. Journal of Clinical Endocrinology and Metabolism, 88, 4465-4471.

Jensen, A., Calvayrac, G., Karahalil, B., Bohr, V. & Stevnsner, T. (2003). Mammalian OGG1 incises 8-oxoadenine opposite cytosine in nuclei and mitochondria, while a different glycosylase incises 8-oxoadenine opposite guanine in nuclei. Journal of Biological Chemistry, 278, 19541-19548.

Bødker, J. S., Wind, T., Jensen, J. K., Hansen, M., Pedersen, K. E. & Andreasen, P. A. (2003). Mapping of the epitope for a monoclonal anti-plasminogen activator inhibitor-1 antibody protecting against inactivating agents. FEBS journal, 270, 1672-1679.

Larsen, K. (2003). Molecular cloning and characterization of a cDNA encoding ryegrass (Lolium perenne) ENOD40 homologue. Journal of Plant Physiology, 160(6), 675-687. https://doi.org/10.1078/0176-1617-00962

Larsen, K. (2003). Molecular cloning and characterization of cDNAs encoding hemoglobin from wheat (Triticum aestivum) and potato (Solanum tuberosum). B B A - General Subjects, 1621(3), 299-305. https://doi.org/10.1016/S0304-4165(03)00094-1

Pallesen, L. T. & Rasmussen, J. T. (2003). MUC15, et hidtil ukendt protein. Mælkeritidende : tidsskrift for mejeriindustrien.

Wind, T., Jensen, J. K., Dupont, D. M., Kulig, P. & Andreasen, P. A. (2003). Mutational analysis of plasminogen activator inhibitor-1. Interactions of a-helix F and its neighbouring structural elements regulates the activity and the rate of latency transition. FEBS journal, 270, 1680-1688.

Villesen, P. & Boomsma, JJ. (2003). Patterns of male parentage in the fungus-growing ants. Behavioral Ecology and Sociobiology, 53(4), 246-253.

Brodersen, D. E., Clemons, Jr., W. M., Carter, A. P., Wimberly, B. T. & Ramakrishnan, V. (2003). Phasing the 30S ribosomal subunit structure. Acta Crystallographica Section D: Biological Crystallography, D59, 2044-2050.

Chikamori, K., Grabowski, D. R., Kinter, M., Willard, B. B., Yadav, S., Aebersold, R. H., Bukowski, R. M., Hickson, I. D., Andersen, A. H., Ganapathi, R. & Ganapathi, M. K. (2003). Phosphorylation of serine 1106 in the catalytic domain of topoisomerase II alpha regulates enzymatic activity and drug sensitivity. Journal of Biological Chemistry, 278, 12696-12702.

Petersen, S. V., Valnickova, Z. & Enghild, J. J. (2003). Pigment-epithelium-derived factor (PEDF) occurs at a physiologically relevant concentration in human blood: purification and characterization. Biochemical Journal, 374, 199-206.

Radutoiu, E. S., Madsen, L. H., Madsen, E. B., Felle, H., Umehara, Y., Grønlund, M., Sato, S., Nakamura, Y., Tabata, S., Sandal, N. N. & Stougaard, J. (2003). Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases. Nature, 425, 585-592.

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Lisbeth Heilesen