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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 4801 to 62 out of 62

Peer-reviewed publications at MBG - all years

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Novero, M., Faccio, A., Genre, A., Stougaard, J., Webb, J. K., Parniske, M. & Bonfante, P. (2002). The mycorrhizal phenotype of the mutant Lotus japonicus Ljsym4-1: A comparative morphological analysis. New Phytologist, 154, 741-749.

Andersen, F. F., Tange, T. Ø., Sinnathamby, T., Olesen, J. R., Andersen, K. E., Westergaard, O., Kjems, J. & Knudsen, B. R. (2002). The RNA splicing factor ASF/SF2 inhibits human topoisomerase I mediated DNA relaxation. Journal of Molecular Biology.

Søe, K., Hartmann, H., Schlott, B., Stevnsner, T. & Grosse, F. (2002). The tumor suppressor protein p53 stimulates the formation of the human topoisomerase I double cleavage complex in vitro. Oncogene, 21, 6614-6623.

Jensen, J. K., Wind, T. & Andreasen, P. A. (2002). The vitronectin binding area of plasminogen activator inhibitor-1, mapped by mutagenesis and protection against an inactivating organochemical ligand. FEBS Letters, 521, 91-94.

Bøttger, P. & Pedersen, L. (2002). Two highly conserved glutamate residues critical for type III sodium-dependent phosphate transport revealed by uncoupling transport function from retroviral receptor function. Journal of Biological Chemistry, 227, 42721-42747.

Lindberg, M. O., Tångrot, J., Otzen, D. E., Dolgikh, D. A., Finkelstein, A. V. & Oliveberg, M. (2001). Folding of circular permutants with decreased contact order: General trend balanced by protein stability. Journal of Molecular Biology, 314(4), 891-900. https://doi.org/10.1006/jmbi.2001.5186

Grove, J. (2001). Constructing TQFTs from modular functors. Journal of Knot Theory and Its Ramifications, 10(8), 1085-1131. https://doi.org/10.1142/S0218216501001347

Cianciolo, G. J., Enghild, J. J. & Pizzo, S. V. (2001). Covalent complexes of antigen and α₂-macroglobulin: Evidence for dramatically-increased immunogenicity. Vaccine, 20(3-4), 554-562. https://doi.org/10.1016/S0264-410X(01)00361-9

Glémin, S., Bataillon, T., Ronfort, J., Mignot, A. & Olivieri, I. (2001). Inbreeding depression in small populations of self-incompatible plants. Genetics, 159(3), 1217-29.

Otzen, D. E. & Oliveberg, M. (2001). A simple way to measure protein refolding rates in water. Journal of Molecular Biology, 313(3), 479-483. https://doi.org/10.1006/jmbi.2001.5039

Boldt, H. B., Overgaard, M. T., Laursen, L. S., Weyer, K., Sottrup-Jensen, L., Oxvig, C. & Weyer, K. (2001). Mutational analysis of the proteolytic domain of pregnancy-associated plasma protein-A (PAPP-A): classification as a metzincin. Biochemical Journal, 358(Pt 2), 359-367. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1222068/

Søe, K., Dianov, G., Nasheuer, H. P., Bohr, V. A., Grosse, F. & Stevnsner, T. (2001). A human topoisomerase I cleavage complex is recognized by an additional human topisomerase I molecule in vitro. Nucleic Acids Research, 29(15), 3195-3203. https://doi.org/10.1093/nar/29.15.3195

Kadarmideen, H. & Pryce, J. E. (2001). Genetic and economic relationships between somatic cell count and clinical mastitis and their use in selection for mastitis resistance in dairy cattle. Animal Science, 73(1), 19 - 28. https://doi.org/10.1017/S135772980005801X

Vorup-Jensen, T., Sørensen, E. S., Jensen, U. B., Schwaeble, W., Kawasaki, T., Ma, Y., Uemura, K., Wakamiya, N., Suzuki, Y., Jensen, T. G., Takahashi, K., Ezekowitz, R. A., Thiel, S. & Jensenius, J. C. (2001). Recombinant expression of human mannan-binding lectin. International Immunopharmacology, 1(4), 677-87.

Martensen, P. M. & Justesen, J. (2001). Specific inhibitors prevent proteolytic degradation of recombinant proteins expressed in High Five cells. BioTechniques, 30(4), 782-4, 786, 788 passim.

Otzen, D. & Schülein, M. (2001). Stability and Folding of Endoglucanase I (CEL7B) from Humicoia Insolens. Biocatalysis and Biotransformation, 19(42130), 469-487. https://doi.org/10.3109/10242420108992031

Søe, K., Dianov, G., Nasheuer, H.-P., Bohr, V., Grosse, F. & Stevnsner, T. (2001). A human topoisomerase I cleavage complex stimulates the formation of a nearby additional cleavage complex in vitro. Nucl. Acids Res., 29, 3195-3103.

Fattman, C. L., Chu, C. T., Kulich, S. M., Enghild, J. J. & Oury, T. D. (2001). Altered expression of extracellular superoxide dismutase in mouse lung after bleomycin treatment. Free Radic. Biol. Med., 31, 1198-1207.

Rattan, S. (2001). Applying hormesis in aging research and therapy. Human and Experimental Toxicology, 20, 281-285.

Egelund, R., Einholm, A. P., Pedersen, K. E., Nielsen, R. W., Christensen, A., Deinum, J. & Andreasen, P. A. (2001). A regulatory hydrophobic area in the flexible joint region of plasminogen activator inhibitor-1, defined with fluorescent activity-neutralizing ligands. Ligand-induced serpin polymerization. Journal of Biological Chemistry, 276, 13077-13086.

Egelund, R., Einholm, A. P., Pedersen, K. E., Nielsen, R. W., Christensen, A., Deinum, J. & Andreasen, P. A. (2001). A regulatory hydrophobic area in the flexible joint region of plasminogen activator inhibitor-1, defined with fluorescent activity-neutralizing ligands. Ligand-induced serpin polymerization. Journal of Biological Chemistry, 276(16), 13077-86. https://doi.org/10.1074/jbc.M009024200

Nilsson, J., Askjaer, P. & Kjems, J. (2001). A role for the basic patch and the C-terminus of RanGTP in regulating the dynamic interaction with importin β, CRM1, and RanBP1. J. Mol. Biol., 305, 231-243.

Brodersen, D. E., Carter, A. P., Clemons, Jr., W. M., Morgan-Warren, R. J., Murphy, 4th, F. V., Ogle, J. M., Tarry, M. J., Wimberly, B. T. & Ramakrishnan, V. (2001). Atomic structures of the 30S subunit and its complexes with ligands and antibiotics. Cold Spring Harbor Laboratory. Symposia on Quantitative Biology, 66, 17-32.

Vestergaard, B., Van, L. B., Andersen, G. R., Nyborg, J., Buckingham, R. H. & Kjeldgaard, M. (2001). Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1. Molecular Cell, 8, 1375-1382.

Dianov, G. L., Souza-Pinto, N., Nyaga, S. G., Thybo, T., Stevnsner, T. & Bohr, V. A. (2001). Base excision repair in nuclear and mitochondrial DNA. In Progress in Nucleic Acid Research and Molecular Biology (Vol. 68, pp. 285-297) https://doi.org/10.1016/S0079-6603(01)68107-8

Dranovsky, A., Vincent, I., Gregori, L., Schwarzman, A., Colflesh, D., Enghild, J., Strittmatter, W., Davies, P. & Goldgaber, D. (2001). Cdc2 phosphorylation of nucleolin demarcates mitotic stages and Alzheimer's disease pathology. Neurobiology of Aging, 22, 517-528.

Scaal, M., Füchtbauer, E.-M. & Brand-Saberi, B. (2001). c-Dermol expression is upregulated by BMP signal. Brain Structure & Function, 203, 1-7.

Jagota, A., Lyngsø, R. B., Pedersen, C. N. S., Gascuel, O. (Ed.) & Moret, B. M. E. (Ed.) (2001). Comparing Hidden Markov Model and a Stochastic Context-Free Grammer. In Proceedings of the First International Workshop on Algorithms in Bioinformatics (2149 of Lecture Notes in Computer Science ed., Vol. Volume 2149/2001, pp. 69-94). Springer.

Lyngsø, R. B., Pedersen, C. N. S., Eades, P. (Ed.) & Takaoka, T. (Ed.) (2001). Complexity of Comparing Hidden Markov Models. In Ikke angivet (2223 of Lecture Notes in Computer Science ed., pp. 416-428). Springer.

Brodal, G. S., Fagerberg, R., Pedersen, C. N. S., Eades, P. (Ed.) & Takaoka, T. (Ed.) (2001). Computing the Quartet Distance Between Evolutionary Trees in Time O(n log² n). In Proceedings of Algorithms and Computation : 12th International Symposium, ISAAC 2001 (2223 of Lecture Notes in Computer Science ed., Vol. 2223/2001, pp. 731-742). Springer.

Hayashi, M., Miyahara, A., Sato, S., Kato, T., Yoshikawa, M., Taketa, M., Hayashi, M., Pedrosa, A., Onda, R., Imaizumi-Anraku, H., Bachmair, A., Sandal, N., Stougaard, J., Murooka, Y., Tabata, S., Kawasaki, S., Kawaguchi, M. & Harada, K. (2001). Construction of a genetic linkage map of the model legume Lotus japonicus using an intraspecific F2 population. D N A Research, 8, 301-310.

Cianciolo, G. J., Enghild, J. J. & Pizzo, S. V. (2001). Covalent complexes of antigen and alpha(2)-macroglobulin: evidence for dramatically-increased immunogenicity. Vaccine, 20, 554-562.

Poulsen, H., Nilsson, J., Damgaard, C. K., Jensen, J. E. & Kjems, J. (2001). CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain. Molecular and Cellular Biology, 21, 7862-7871.

Garau, G., Fedosov, S., Petersen, T. E., Geremia, S. & Randaccio, L. (2001). Crystallization and preliminary X-ray diffraction analysis of human transcobalamin, a vitamin B12-transporting protein. Acta Crystallization, D57, 1890-1892.

Pedersen, L., Andersen, G. R., Knudsen, C. R., Kinzy, T. G. & Nyborg, J. (2001). Crystallization of the yeast elongation factor complex eEF1A-eEF1B alpha. Acta crystallographica Section D: Structural biology , 57, 159-161.

Carter, A. P., Clemons, Jr., W. M., Brodersen, D. E., Morgan-Warren, R. J., Hartsch, T., Wimberly, B. T. & Ramakrishnan, V. (2001). Crystal structure of an initiation factor bound to the 30S ribosomal subunit. Science, 291, 498-501.

Clemons, Jr., W. M., Brodersen, D. E., McCutcheon, J. P., May, J. L., Carter, A. P., Morgan-Warren, R. J., Wimberly, B. T. & Ramakrishnan, V. (2001). Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: purification, crystallization and structure determination. Journal of Molecular Biology, 310(4), 827-843.

Andersen, G. R., Valente, L., Pedersen, L., Kinzy, T. G. & Nyborg, J. (2001). Crystal structures of nucleotide exchange intermediates in the eEF1A:eEF1Ba complex. Nature Struct. Biol., 8, 531-534.

Nielsen, L. B., Pedersen, F. S. & Pedersen, L. (2001). Expression of type III sodium-dependent transporters/retroviral receptors mRNAs during osteoblast differentiation. Bone, 28, 160-166.

Grove, J. (2001). From Modular Functors to Topological Quantum Field Theories.

Kadarmideen, H. N. & Dekkers, J. C. M. (2001). Generalized marker regression and interval QTL mapping methods for binary traits in half-sib family designs. Journal of Animal Breeding and Genetics, 118(5), 297-309. https://doi.org/10.1046/j.1439-0388.2001.00301.x, https://doi.org/10.1046/j.1439-0388.2001.00301.x

Nielsen, V. H. & Thomsen, B. (2001). Genetic assignment of the GLI gene to porcine chromosome 5. Animal Genetics, 31, 409-410.

Kadarmideen, H. N., Rekaya, R. & Gianola, D. (2001). Genetic parameters for clinical mastitis in Holstein-Friesians in the United Kingdom: A Bayesian analysis. Animal Science, 73(2), 229-240. https://doi.org/10.1017/S1357729800058203

Stougaard, J. (2001). Genetics and genomics of root symbiosis. Current Opinion in Plant Biology, 4, 328-336.

Chatterton, D. E. W., Sørensen, E. S., Petersen, T. E. & Lönnerdal, B. (2001). Heparin binding peptides from the 23 N-terminal residues of α_s1-casein present in commercial preparations of whey protein concentrate, glycomacropeptide and α-lactalbumin. Milchwissenschaft, 56(3), 143-146.

Schierup, M. H., Mable, B. K., Awadalla, P. & Charlesworth, D. (2001). Identification and Characterization of a Polymorphic Receptor Kinase Gene Linked to the Self-Incompatibility Locus of Arabidopsis lyrata. Genetics, 158(387-399), 12259-12254.

Knudsen, C., Wieden, H. J. & Rodnina, M. V. (2001). Importance of structural transitions of the switch II region for the functions of elongation factor Tu on the ribosome. Journal of Biological Chemistry, 276, 22183-22190.

Hartmann, R., Walko, G. & Justesen, J. (2001). Inhibition of 2′-5′ oligoadenylate synthetase by divalent metal ions. FEBS Letters, 507, 54-58.

Fröhlich, R. F., Hansen, S. G., Lisby, M., Grainge, M., Westergaard, O., Jayaram, M. & Knudsen, B. R. (2001). Inhibition of Flp recombinase by the topoisomerase I targeting drugs, camptothecin and NSC-314622. Journal of Biological Chemistry, 276(10), 6993-6997. https://doi.org/10.1074/jbc.C000901200

Bayes-Genis, A., Schwartz, R. S., Lewis, D. A., Overgaard, M. T., Christiansen, M., Oxvig, C., Ashai, K., Holmes, D. R. J. & Conover, C. A. (2001). Insulin-like growth factor binding protein-4 protease produced by smooth muscle cells increases in the coronary artery after angioplasty. Arteriosclerosis, Thrombosis, and Vascular Biology, 21, 335-341.

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Lisbeth Heilesen