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Latest peer-reviewed publications at MBG

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Displaying results 3301 to 136 out of 136

Peer-reviewed publications at MBG - all years

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Dueholm, M. S., Nielsen, P. H., Chapman, M. & Otzen, D. (2013). Functional Amyloids in Bacteria. In Amyloid Fibrils and Prefibrillar Aggregates: Molecular and Biological Properties (pp. 411-438). Wiley-VCH. https://doi.org/10.1002/9783527654185.ch19

Sükösd, Z., Knudsen, B., Anderson, J. WJ., Novák, A., Kjems, J. & Pedersen, C. N. S. (2013). Characterising RNA secondary structure space using information entropy. BMC Bioinformatics, 14 (Suppl 2), 1-9. Article S22. https://doi.org/10.1186/1471-2105-14-S2-S22

Jensen, S. J., Harmsen, C., Nielsen, M. J., Stougaard, M., Leong, K. W., Knudsen, B. R. & Ho, Y.-P. (2013). Single cell enzyme diagnosis on the chip. International Conference on Micro Electro Mechanical Systems, 911 - 914. https://doi.org/10.1109/MEMSYS.2013.6474392

Helwig, M., Hoshino, A., Berridge, C., Lee, S.-N., Lorenzen, N., Otzen, D., Eriksen, J. & Lindberg, I. (2013). The neuroendocrine protein 7B2 suppresses the aggregation of neurodegenerative disease-related proteins. Journal of Biological Chemistry, 288(2), 1114.

Wang, H., Andersen, K. K., Sehgal, P., Hagedorn, J., Westh, P., Borch, K. & Otzen, D. E. (2013). pH regulation of the kinetic stability of the lipase from Thermomyces lanuginosus. Biochemistry, 52(1), 264-276. https://doi.org/10.1021/bi301258e

Scilabra, S. D., Troeberg, L., Yamamoto, K., Emonard, H., Thogersen, I., Enghild, J. J., Strickland, D. K. & Nagase, H. (2013). Differential Regulation of Extracellular Tissue Inhibitor of Metalloproteinases-3 Levels by Cell Membrane-bound And Shed Low Density Lipoprotein Receptor-related Protein 1. Journal of Biological Chemistry, 288, 332-342. https://doi.org/10.1074/jbc.M112.393322

Quinones, J. P., Gothelf, K. V., Kjems, J., Caballero, A. M. H., Schmidt, C. & Covas, C. P. (2013). N,O6-partially acetylated chitosan nanoparticles hydrophobically-modified for controlled release of steroids and vitamin E. Carbohydrate Polymers, 91(1), 143-151. https://doi.org/10.1016/j.carbpol.2012.07.080

Kløverpris, S., Skov, L. L., Glerup, S., Pihl, K., Christiansen, M. & Oxvig, C. (2013). Formation of high-molecular-weight angiotensinogen during pregnancy is a result of competing redox reactions with the proform of eosinophil major basic protein. Biochemical Journal, 449(1), 209-217. https://doi.org/10.1042/BJ20120801

Pedersen, J., Ugleholdt, R. K., Jørgensen, S. M., Windeløv, J. A., Grunddal, K. V., Schwartz, T. W., Füchtbauer, E.-M., Poulsen, S. S., Holst, P. J. & Holst, J. J. (2013). Glucose metabolism is altered after loss of L cells and α-cells but not influenced by loss of K cells. American Journal of Physiology: Endocrinology and Metabolism, 304(1), E60-E73. https://doi.org/10.1152/ajpendo.00547.2011

Hjortshøj, R. L., Ravnshøj, A. R., Nyman, M., Orabi, J., Backes, G., Pinnschmidt, H., Havis, N., Stougaard, J. & Stukenbrock, E. H. (2013). High levels of genetic and genotypic diversity in field populations of the barley pathogen Ramularia collo-cygni. European Journal of Plant Pathology, 136(1), 51-60. https://doi.org/10.1007/s10658-012-0137-8

Rattan, S. (2013). Nutritional hormetins and aging. In R. Watson (Ed.), Bioactive Food as Dietary Interventions for the Aging Population (pp. 201-207). Academic Press.

Wang, H., Andersen, K. K., Vad, B. S. & Otzen, D. E. (2013). OmpA can form folded and unfolded oligomers. Biochimica et Biophysica Acta - Proteins and Proteomics, 1834(1), 127-136. https://doi.org/10.1016/j.bbapap.2012.09.002

Nawroth, I., Alsner, J., Deleuran, B. W., Dagnæs-Hansen, F., Yang, C., Horsman, M. R., Overgaard, J., Howard, K., Kjems, J. & Gao, S. (2013). Peritoneal macrophages mediated delivery of chitosan/siRNA nanoparticle to the lesion site in a murine radiation-induced fibrosis model. Acta Oncologica, 52(8), 1730-1738. https://doi.org/10.3109/0284186X.2012.726373

Gonzalez, B. B., Dagnæs-Hansen, F., Fenton, R. A., Gao, S., Hein, S., Dong, M., Kjems, J. & Howard, K. A. (2013). Protection and systemic translocation of siRNA following oral administration of chitosan/siRNA nanoparticles. Molecular Therapy - Nucleic Acids, 2(1), 1-8. Article e76. https://doi.org/10.1038/mtna.2013.2

Boldt, H. B., Bale, L. K., Resch, Z. T., Oxvig, C., Overgaard, M. T. & Conover, C. A. (2013). Effects of mutated pregnancy-associated plasma protein-a on atherosclerotic lesion development in mice. Endocrinology, 154(1), 246-252. https://doi.org/10.1210/en.2012-1552

Rattan, S., Kryzch, V., Schnebert, S., Perrier, E. & Nizard, C. (2013). Hormesis-based anti-aging products: a case study of a novel cosmetic. Dose-Response, 11(1), 99-108. https://doi.org/10.2203/dose-response.11-054.Rattan

Pyrc, K., Milewska, A., Kantyka, T., Sroka, A., Maresz, K., Koziel, J., Nguyen, K.-A., Enghild, J. J., Knudsen, A. D. & Potempa, J. (2013). Inactivation of epidermal growth factor by Porphyromonas gingivalis as a potential mechanism for periodontal tissue damage. Infection and Immunity, 81(1), 55-64. https://doi.org/10.1128/IAI.00830-12

Fedosov, S., Brask, J., Pedersen, A. K., Nordblad, M., Woodley, J. D. & Xu, X. (2013). Kinetic model of biodiesel production using immobilized lipase Candida antarctica lipase B. Journal of Molecular Catalysis - B Enzymatic, 74(1-2), 156 – 168. https://doi.org/10.1016/j.molcatb.2012.09.011

Credali, A., Garcia-Calderón, M., Dam, S. S., Perry, J., Diaz-Quintana, A., Parniske, M., Wang, T. L., Stougaard, J., Vega, J. M. & Márquez, A. J. (2013). The K⁺ dependent asparaginase, NSE₁, is crucial for plant growth and seed production in Lotus japonicus. Plant and Cell Physiology, 54(1), 107-118. https://doi.org/10.1093/pcp/pcs156

Schmid, M. & Jensen, T. H. (2013). Transcription-associated quality control of mRNP. BBA General Subjects, 1829(1), 158-168. https://doi.org/10.1016/j.bbagrm.2012.08.012

Thorgeirsson, T. E., Gudbjartsson, D. F., Sulem, P., Besenbacher, S., Styrkarsdottir, U., Thorleifsson, G., Walters, G. B., Furberg, H., Sullivan, P. F., Marchini, J., McCarthy, M. I., Steinthorsdottir, V., Thorsteinsdottir, U., Stefansson, K. & TAG Consortium (2013). A common biological basis of obesity and nicotine addiction. Translational Psychiatry, 3, e308. https://doi.org/10.1038/tp.2013.81

Sand, A., Holt, M. K., Johansen, J., Fagerberg, R., Pedersen, C. N. S., Brodal, G. S. & Mailund, T. (2013). Algorithms for Computing the Triplet and Quartet Distances for Binary and General Trees. Biology, 2(4), 1189-1209. https://doi.org/10.3390/biology2041189

Kogelman, L. J. A., Kadarmideen, H. N., Mark, T., Karlskov-Mortensen, P., Bruun, C. S., Cirera, S., Jacobsen, M. J., Jørgensen, C. B. & Fredholm, M. (2013). An F2 pig resource population as a model for genetic studies of obesity and obesity-related diseases in humans: Design and genetic parameters. Frontiers in Genetics, 4(MAR), Article Article 29. https://doi.org/10.3389/fgene.2013.00029

Sand, A., Pedersen, C. N. S., Mailund, T., Brodal, G. S. & Fagerberg, R. (2013). A practical O(n log² n) time algorithm for computing the triplet distance on binary trees. BMC Bioinformatics, 14(Suppl 2), S18. https://doi.org/10.1186/1471-2105-14-S2-S18

Hollegaard, M. V., Grauholm, J., Nielsen, R., Grove, J., Mandrup, S. & Hougaard, D. M. (2013). Archived neonatal dried blood spot samples can be used for accurate whole genome and exome-targeted next-generation sequencing. Molecular Genetics and Metabolism, 110(1-2), 65-72. https://doi.org/10.1016/j.ymgme.2013.06.004

Bataillon, T., Joyce, P. & Sniegowski, P. (2013). As it happens: current directions in experimental evolution. Biology Letters, 9(1), Article 20120945. https://doi.org/10.1098/rsbl.2012.0945

Fedosov, S. (2013). Biochemical markers of vitamin B12 deficiency combined in one diagnostic parameter: The age-dependence and association with cognitive function and blood hemoglobin. Clinica Chimica Acta, 422, 47-53. https://doi.org/10.1016/j.cca.2013.04.002

Lundin, K. E., Højland, T., Hansen, B., Persson, R., Bramsen, J. B., Kjems, J., Koch, T., Wengel, J. & Smith, C. I. E. (2013). Biological activity and biotechnological aspects of locked nucleic acids. Advances in Genetics, 82, 47-107. https://doi.org/10.1016/B978-0-12-407676-1.00002-0

Tonami, K., Hata, S., Ojima, K., Ono, Y., Kurihara, Y., Amano, T., Sato, T., Kawamura, Y., Kurihara, H. & Sorimachi, H. (2013). Calpain-6 deficiency promotes skeletal muscle development and regeneration. PLoS Genetics, 9(8), e1003668. https://doi.org/10.1371/journal.pgen.1003668

Zhang, S., Andreasen, M., Nielsen, J. T., Liu, L., Nielsen, E. H., Song, J., Ji, G., Sun, F., Skrydstrup, T., Besenbacher, F., Nielsen, N. C., Otzen, D. E. & Dong, M. (2013). Coexistence of ribbon and helical fibrils originating from hIAPP20-29 revealed by quantitative nanomechanical atomic force microscopy. Proceedings of the National Academy of Sciences (PNAS), 110(8), 2798-2803. https://doi.org/10.1073/pnas.1209955110

Li, D., Lyons, J. A., Pye, V. E., Vogeley, L., Aragão, D., Kenyon, C. P., Shah, S. T. A., Doherty, C., Aherne, M. & Caffrey, M. (2013). Crystal structure of the integral membrane diacylglycerol kinase. Nature, 497(7450), 521-524. https://doi.org/10.1038/nature12179

Gonzalez, B. B., Lassen, L. B., Füchtbauer, A. C., Füchtbauer, E.-M. & Pedersen, F. S. (2013). Deregulated Nras Expression in Knock-In Animals Harboring a Gammaretroviral Long Terminal Repeat at the Nras/Csde1 Locus. PLoS One, 8(2), Article e56029. https://doi.org/10.1371/journal.pone.0056029

Hayashi, Y. & Engelmann, P. (2013). Earthworm's immunity in the nanomaterial world: new room, future challenges. Invertebrate Survival Journal, 10, 69-76. http://www.isj.unimo.it/articoli/ISJ298.pdf

Martin, MH., Nielsen, MB., Madsen, IE., Petersen, SM., Lange, T. & Rugulies, R. (2013). Effectiveness of a coordinated and tailored return-to-work intervention for sickness absence beneficiaries with mental health problems. Journal of Occupational Rehabilitation, 23(4), 621-30.

Brodal, G. S., Fagerberg, R., Mailund, T., Pedersen, C. N. S. & Sand, A. (2013). Efficient Algorithms for Computing the Triplet and Quartet Distance Between Trees of Arbitrary Degree. The Annual A C M - S I A M Symposium on Discrete Algorithms. Proceedings, 24, 1814-1832. http://knowledgecenter.siam.org/0236-000098/0236-000098/1

Bramsen, J. B. & Kjems, J. (2013). Engineering small interfering RNAs by strategic chemical modification. In D. J. Taxman (Ed.), siRNA design: methods and protocols (pp. 87-109). Springer. https://doi.org/10.1007/978-1-62703-119-6_5

Sørensen, R. S., Okholm, A. H., Schaffert, D. H., Kodal, A. L. B., Gothelf, K. V. & Kjems, J. (2013). Enzymatic Ligation of Large Biomolecules to DNA. ACS Nano, 7(9), 8098-8104. https://doi.org/10.1021/nn403386f

Demirovic, D. & Rattan, S. (2013). Establishing cellular stress response profiles as biomarkers of homeodynamics, health, and hormesis. Experimental Gerontology, 48(1), 94-98. https://doi.org/10.1016/j.exger.2012.02.005

Soerensen, M., Dato, S., Tan, Q., Thinggaard, M., Kleindorp, R., Beekman, M., Suchiman, H. E. D., Jacobsen, R., McGue, M., Stevnsner, T., Bohr, V. A., de Craen, A. J. M., Westendorp, R. G. J., Schreiber, S., Slagboom, P. E., Nebel, A., Vaupel, J. W., Christensen, K. & Christiansen, L. (2013). Evidence from case-control and longitudinal studies supports associations of genetic variation in APOE, CETP, and IL6 with human longevity. Age (Omaha), 35(2), 487-500. https://doi.org/10.1007/s11357-011-9373-7

Castagnini, A., Foldager, L. & Bertelsen, A. (2013). Excess mortality of acute and transient psychotic disorders: comparison with bipolar affective disorder and schizophrenia. Acta Psychiatrica Scandinavica, 128(5), 370-375. https://doi.org/10.1111/acps.12077

Otzen, D. & Andersen, K. K. (2013). Folding of outer membrane proteins. Archives of Biochemistry and Biophysics, 531(1-2), 34-43. https://doi.org/10.1016/j.abb.2012.10.008

Chen, M., Hein, S., Le, D. Q. S., Feng, W., Foss, M., Kjems, J., Besenbacher, F., Zou, X. & Bünger, C. (2013). Free radicals generated by tantalum implants antagonize the cytotoxic effect of doxorubicin. International Journal of Pharmaceutics, 448(1), 214-20. https://doi.org/10.1016/j.ijpharm.2013.03.041

Simonsen, M., Christensen, M. H., Thomsen, R. & Pedersen, C. N. S. (2013). GPU-Accelerated High-Accuracy Molecular Docking using Guided Differential Evolution. In S. tsutsui & P. Collet (Eds.), Massively Parallel Evolutionary Computation on GPGPUs Springer Publishing Company.

Prado-Martinez, J., Sudmant, P. H., Kidd, J. M., Li, H., Kelley, J. L., Lorente-Galdos, B., Veeramah, K. R., Woerner, A. E., O'Connor, T. D., Santpere, G., Cagan, A., Theunert, C., Casals, F., Laayouni, H., Munch, K., Hobolth, A., Halager, A. E., Malig, M., Hernandez-Rodriguez, J. ... Marques-Bonet, T. (2013). Great ape genetic diversity and population history. Nature, 499, 471–475. https://doi.org/10.1038/nature12228

Urbanski, D. F., Malolepszy, A., Stougaard, J. & Andersen, S. U. (2013). High-Throughput and Targeted Genotyping of Lotus japonicus LORE1 Insertion Mutants. Methods in Molecular Biology, 1069, 119-146. https://doi.org/10.1007/978-1-62703-613-9_10

Ahdidan, J., Foldager, L., Rosenberg, R., Rodell, A., Videbech, P. & Mors, O. (2013). Hippocampal volume and serotonin transporter polymorphism in major depressive disorder. Acta Neuropsychiatrica, 25(4), 206-214. https://doi.org/10.1017/neu.2013.3