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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 4251 to 62 out of 62

Peer-reviewed publications at MBG - all years

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Dong, M., Howard, K. A., Oupicky, D., Bisht, H. J., Kjems, J. & Besenbacher, F. (2007). Visualisation of Thermal Activated Nanocarriers Using In Situ Atomic Force Microscopy. Nanotechnology.

Dong, M. D., Howard, K. A., Oupicky, D., Bisht, H., Kjems, J. & Besenbacher, F. (2007). Visualization of thermally activated nanocarriers using in situ atomic force microscopy: Nanotechnology. Nanotechnology, 18(18), Article 185501. https://doi.org/10.1088/0957-4484/18/18/185501

Wuerges, J., Geremia, S., Fedosov, S. & Randaccio, L. (2007). Vitamin B₁₂ transport proteins: Crystallographic analysis of β-axial ligand substitutions in cobalamin bound to transcobalamin. IUBMB Life, 59(11), 722-729.

Otzen, D. & Nielsen, P. H. (2007). We find them here, we find them there: Functional bacterial amyloid. Cellular and Molecular Life Sciences, 65, 910-927.

Jørgensen, F. G., Schierup, M. H. & Clark, A. G. (2006). Heterogeneity in Regional GC Content and Differential Usage of Codons and Amino Acids in GC-Poor and GC-Rich Regions of the Genome of Apis mellifera. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msl190

Munch, K. & Krogh, A. (2006). Automatic generation of gene finders for eukaryotic species. BMC Bioinformatics, 7, Article 263. https://doi.org/10.1186/1471-2105-7-263

Severinsen, J. E., Bjarkam, C. R., Kiaer-Larsen, S., Olsen, I. M., Nielsen, M. M., Blechingberg, J., Nielsen, A. L., Holm, I. E., Foldager, L., Young, B. D., Muir, W. J., Blackwood, D. H. R., Corydon, T. J., Mors, O. & Børglum, A. D. (2006). Evidence implicating BRD1 with brain development and susceptibility to both schizophrenia and bipolar affective disorder. Molecular Psychiatry, 11(12), 1126-38. https://doi.org/10.1038/sj.mp.4001885

Kammler, S., Otte, M., Hauber, I., Kjems, J., Hauber, J. & Schaal, H. (2006). The strength of the HIV-1 3' splice sites affects Rev function. Retrovirology, 3(89), 1-20. https://doi.org/10.1186/1742-4690-3-89

Dupont, D. M., Blouse, G. E., Hansen, M., Mathiasen, L., Kjelgaard, S., Jensen, J. K., Christensen, A., Gils, A., Declerck, P. J., Andreasen, P. A. & Wind, T. (2006). Evidence for a pre-latent form of the serpin plasminogen activator inhibitor-1 with a detached beta-strand 1C. Journal of Biological Chemistry, 281(47), 36071-81. https://doi.org/10.1074/jbc.M606851200

Skeldal, S., Larsen, J. V., Pedersen, K. E., Petersen, H. H., Egelund, R., Christensen, A., Jensen, J. K., Gliemann, J. & Andreasen, P. A. (2006). Binding areas of urokinase-type plasminogen activator-plasminogen activator inhibitor-1 complex for endocytosis receptors of the low-density lipoprotein receptor family, determined by site-directed mutagenesis. FEBS journal, 273(22), 5143-59. https://doi.org/10.1111/j.1742-4658.2006.05511.x

Walter, P., Klein, F., Lorentzen, E., Ilchmann, A., Klug, G. & Evguenieva-Hackenberg, E. (2006). Characterization of native and reconstituted exosome complexes from the hyperthermophilic archaeon Sulfolobus solfataricus. Mol. Microbiol., 62(4), 1076-1089.

Jensen, J. K., Malmendal, A., Schiøtt, B., Skeldal, S., Pedersen, K. E., Celik, L., Nielsen, N. C., Andreasen, P. A. & Wind, T. (2006). Inhibition of plasminogen activator inhibitor-1 binding to endocytosis receptors of the low-density-lipoprotein receptor family by a peptide isolated from a phage display library. Biochemical Journal, 399(3), 387-96. https://doi.org/10.1042/BJ20060533

Glémin, S., Vimond, L., Ronfort, J., Bataillon, T. & Mignot, A. (2006). Marker-based investigation of inbreeding depression in the endangered species Brassica insularis. Heredity, 97(4), 304-311. https://doi.org/10.1038/sj.hdy.6800870

Glerup, S., Kløverpris, S. & Oxvig, C. (2006). The proform of the eosinophil major basic protein binds the cell surface through a site distinct from its C-type lectin ligand-binding region. Journal of Biological Chemistry, 281(42), 31509-31516. https://doi.org/10.1074/jbc.M605824200

Kadarmideen, H. N., Li, Y. & Janss, L. C. G. (2006). Gene-environment interactions in complex diseases: Genetic models and methods for QTL mapping in multiple half-sib populations. Genetical Research, 88(2), 119-131. https://doi.org/10.1017/S0016672306008391

Fredslund, F., Jenner, L. B., Husted, L. B., Nyborg, J., Andersen, G. R. & Sottrup-Jensen, L. (2006). The structure of bovine complement component 3 reveals the basis for thioester function. Journal of Molecular Biology, 361(1), 115-127. https://doi.org/10.1016/j.jmb.2006.06.009

Bono, F., Ebert, J., Lorentzen, E. & Conti, E. (2006). The crystal structure of the exon junction complex reveals how it maintains a stable grip on mRNA. Cell, 126(4), 713-725.

Lützelberger, M., Reinert, L. S., Das, A. T., Berkhout, B. & Kjems, J. (2006). A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability. Journal of Biological Chemistry, 281(27), 18644-18651. https://doi.org/10.1074/jbc.M513698200

Bergqvist, S., Croy, C. H., Kjærgaard, M., Huxford, T., Ghosh, G. & Komives, E. A. (2006). Thermodynamics reveal that helix four in the NLS of NF-kappaB p65 anchors IkappaBalpha, forming a very stable complex. Journal of Molecular Biology, 360(2), 421-34. https://doi.org/10.1016/j.jmb.2006.05.014

Johannessen, M. M., Damgaard, C., Andersen, B. A. & Jørgensen, R. B. (2006). Competition affects the production of first backcross offspring on F ₁-hybrids, Brassica napus × B. rapa. Euphytica, 150(1-2), 17-25. https://doi.org/10.1007/s10681-006-9083-x

Sanggaard, K. W., Sonne-Schmidt, C. S., Jacobsen, C., Thøgersen, I. B., Valnickova, Z., Wisniewski, H. G. & Enghild, J. J. (2006). Evidence for a two-step mechanism involved in the formation of covalent HC·TSG-6 complexes. Biochemistry, 45(24), 7661-7668. https://doi.org/10.1021/bi060106s

Kadarmideen, H. N., Von Rohr, P. & Janss, L. L. G. (2006). From genetical genomics to systems genetics: Potential applications in quantitative genomics and animal breeding. Mammalian Genome, 17(6), 548-564. https://doi.org/10.1007/s00335-005-0169-x

Marques, J. T., Devosse, T., Wang, D., Zamanian-Daryoush, M., Serbinowski, P., Hartmann, R., Fujita, T., Behlke, M. A. & Williams, B. R. G. (2006). A structural basis for discriminating between self and nonself double-stranded RNAs in mammalian cells. Nature Biotechnology, 24(5), 559-565.

Munch, K., Gardner, P. P., Arctander, P. & Krogh, A. (2006). A hidden Markov model approach for determining expression from genomic tiling micro arrays. BMC Bioinformatics, 7, Article 239. https://doi.org/10.1186/1471-2105-7-239

Ostrowski, M. F., David, J., Santoni, S., McKhann, H., Reboud, X., Le Corre, V., Camilleri, C., Brunel, D., Bouchez, D., Faure, B. & Bataillon, T. (2006). Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: Possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology, 15(6), 1507-1517. https://doi.org/10.1111/j.1365-294X.2006.02865.x

Lorentzen, E. & Conti, E. (2006). The exosome and the proteasome: nano-compartments for degradation. Cell, 125(4), 651-654.

Nielsen, E. R., Eskildsen-Helmond, Y. E. G. & Rattan, S. I. S. (2006). MAP kinases and heat shock-induced hormesis in human fibroblasts during serial passaging in vitro. New York Academy of Sciences. Annals, 1067, 343-348. https://doi.org/10.1196/annals.1354.048

Kassen, R. & Bataillon, T. (2006). Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria. Nature Genetics, 38(4), 484-488. https://doi.org/10.1038/ng1751

Mohey, R., Tolstrup, M., Jørgensen, L. B., Møller, B. K., Black, F. T., Kjems, J. & Obel, N. (2006). HIV-1 reverse Transcriptase Gene 103K/N and 184M/V Combinations in Tandem: Detection and Quantification of HIV-1 Populations in the CD45RO+ T-cell Compartment by a Double-ARMS Real-Time PCR assay. JAIDS: Journal of Acquired Immune Deficiency Syndromes , 41(2), 160-167. https://doi.org/10.1097/01.qai.0000191998.70034.64

Karacaören, B., Jaffrézic, F. & Kadarmideen, H. N. (2006). Genetic parameters for functional traits in dairy cattle from daily random regression models. Journal of Dairy Science, 89(2), 791-798. https://doi.org/10.3168/jds.S0022-0302(06)72141-5

Paca-Uccaralertkun, S., Damgaard, C. K., Auewarakul, P., Thitithanyanont, A., Suphaphiphat, P., Essex, M., Kjems, J. & Lee, T.-H. (2006). The Effect of a Single Nucleotide Substitution in the Splicing Silencer in the tat/rev Intron on HIV Type 1 Envelope Expression. AIDS Research and Human Retroviruses, 22(1), 76-82. https://doi.org/10.1089/aid.2006.22.76

Villesen, P. & Fredsted, T. (2006). Fast and non-invasive PCR sexing of primates: apes, Old World monkeys, New World monkeys and Strepsirrhines. BMC Ecology, 6, 8. https://doi.org/10.1186/1472-6785-6-8

Fredsted, T., Jensen, T.-L. W. & Villesen, P. (2006). Introgression of mountain hare (Lepus timidus) mitochondrial DNA into wild brown hares (Lepus europaeus) in Denmark. BMC Ecology, 6, 17. https://doi.org/10.1186/1472-6785-6-17

Singh, R., Kølvraa, S., Bross, P., Jensen, U. B., Gregersen, N., Tan, Q., Knudsen, C. & Rattan, S. I. S. (2006). Reduced heat shock response in human mononuclear cells during aging and its association with polymorphisms in HSP70 genes. Cell Stress & Chaperones, 11(3), 208-215. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1576475/

Fredslund, J., Madsen, L. H., Hougaard, B. K., Nielsen, A. M., Nielsen, A. M., Bertioli, D., Sandal, N. N., Schauser, L. & Stougaard, J. (2006). A general pipeline for the development of anchor markers for comparative genomics in plants. BMC Genomics, 7, 207.

Jonstrup, S. P., Koch, J. & Kjems, J. (2006). A microRNA detection system based on padlock probes and rolling circle amplification. RNA, 12(9), 1747-1752. https://doi.org/10.1261/rna.110706

Thomsen, B., Horn, P., Panitz, F., Bendixen, E., Petersen, A. H., Holm, L.-E., Nielsen, V. H., Agerholm, J. S., Arnbjerg, J. & Bendixen, C. (2006). A missense mutation in the bovine SLC35A3 gene, encoding a UDP-N-acetylglucosamine transporter, causes complex vertebral malformation. Genome Research, 16, 97-105. https://doi.org/10.1101/gr.3690506

Beer, C. & Pedersen, L. (2006). Amphotropic murine leukemia virus is preferentially attached to cholesterol-rich microdomains after binding to mouse fibroblasts. Virol. J., 2(21).

Villesen, P. & Fredsted, T. (2006). A new sex identification tool: one primer pair can reliably sex ape and monkey DNA samples. Conservation Genetics, 1-5.

Sironen, A., Thomsen, B., Andersson, M., Ahola, V. & Vilkki, J. (2006). An intronic insertion in KLP2 result in aberrant splicing and causes the immotile short-tail sperm defect in the pig. Proceedings of the National Academy of Sciences (PNAS), 103(13), 5006-5011. https://doi.org/10.1073/pnas.0506318103

Pollard, K. S., Salama, S. R., Lambert, N., Lambot, M.-A., Coppens, S., Pedersen, J. S., Katzman, S., King, B., Onodera, C., Siepel, A., Kern, A. D., Dehay, C., Igel, H., Ares, M., Vanderhaeghen, P. & Haussler, D. (2006). An RNA gene expressed during cortical development evolved rapidly in humans. Nature, 443(7108), 167-72. https://doi.org/10.1038/nature05113

Kanamori, N., Madsen, L. H., Radutoiu, E. S., Frantescu, M., Quistgaard, E. M. H., Miwa, H., Downie, J. A., James, E., Felle, H. H., Haaning, L. L., Jensen, T. H., Sato, S., Nakamura, Y., Tabata, S., Sandal, N. N. & Stougaard, J. (2006). A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. Proceedings of the National Academy of Sciences (PNAS), 103, 359-364.

Fedosov, S., Grissom, C. B., Fedosova, N. U., Moestrup, S. K., Nexø, E. & Petersen, T. E. (2006). Application of a fluorescent Cbl-analoque for analysis of the binding kinetics. A study employing recombinant human transcobalamin and intrinsic factor. FEBS journal, 273, 4742-4753.

Heckmann, A. B., Hebelstrup, K. H., Larsen, K., Micaelo, N. M. & Jensen, E. Ø. (2006). A single hemoglobin gene in Myrica gale retains both symbiotic and non-symbiotic specificity. Plant Mol. Biol., 61(4-5), 769-779.

Heckmann, A. B., Hebelstrup, K. H., Larsen, K., Micaelo, N. M. & Jensen, E. Ø. (2006). A single hemoglobin gene in Myrica gale retains both symbiotic and non-symbiotic specificity. Plant Molecular Biology, 61(4-5), 769-79. https://doi.org/10.1007/s11103-006-0048-1

Andersen, J. E. & Grove, J. (2006). Automorphism fixed points in the moduli space of semi-stable bundles. Quarterly Journal of Mathematics, 57(1), 1-35. https://doi.org/10.1093/qmath/hai008

Grove, J. & Andersen, JE. (2006). Automorphism fixed Points in the Moduli Space of Semistable bundles. Quarterly Journal of Mathematics, 57(1), 1-35.

Hvidtjørn, D., Grove, J., Schendel, D., Væth, M., Ernst, E., Nielsen, L. F. & Thorsen, P. (2006). Cerebral Palsy among children born after in vitro fertilization: The role of preterm delivery - a population-based cohort study. Pediatrics, 118(2), 475-482. https://doi.org/10.1542/peds.2005-2585

Ørning, L., Rian, A., Campbell, A., Brady, J., Fedosov, S., Bramlage, B., Thompson, K. & Quadros, E. V. (2006). Characterization of a monoclonal antibody with specificity for holo-transcobalamin. Nutr.Metab., 3, PMID:16393340.

Bøttger, P., Hede, S. E., Grunnet, M., Høyer, B., Klærke, D. A. & Pedersen, L. (2006). Characterization of transport mechanisms and determinants critical for Na⁺-dependent P_i symport of the PiT family paralogs human PiT1 and PiT2. American Journal of Physiology: Cell Physiology, 291, 1377-1387.

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Lisbeth Heilesen