Department of Molecular Biology and Genetics

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 Department of Molecular Biology and Genetics Research Peer-reviewed articles

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Latest peer-reviewed publications at MBG

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Roug, A. S., Nederby, L., Kjeldsen, E., Villesen, P. & Nyvold, C. G. (2013). Two Hematological Pre-Malignancies In a Pair Of Homozygous Twins Revealing Differences In Their Pre-and Postnatal Development. Blood, 122(21), 5262-5262.
Borre-Gude, S., Frøhlich, R. F. & Knudsen, B. R. (2013). Type IB topoisomerases and tyrosine recombinases - distinct functions within related structural frameworks. Current Topics in Biochem. Res., 5, 149-159.
Castagnini, A. & Foldager, L. (2013). Variations in incidence rates and age of onset of acute and transient psychotic disorders. Social Psychiatry and Psychiatric Epidemiology, 48(12), 1917-1922. https://doi.org/10.1007/s00127-013-0726-7
Nielsen, S. B., Macchi, F., Raccosta, S., Langkilde, A. E., Giehm, L., Kyrsting, A., Svane, A. S. P., Manno, M., Christiansen, G., Nielsen, N. C., Oddershede, L., Vestergaard, B. & Otzen, D. (2013). Wildtype and A30P Mutant Alpha-Synuclein Form Different Fibril Structures. PLoS One, 8(7), Article e67713. https://doi.org/10.1371/journal.pone.0067713
Thakur, M. & Rattan, S. (Eds.) (2012). Brain aging and therapeutic interventions. Springer Science+Business Media.
Vestergaard, C. L., Flyvbjerg, H. & Møller, I. M. (2012). Intracellular signaling by diffusion: can waves of hydrogen peroxide transmit intracellular information in plant cells? Frontiers in Plant Science, 3(295). https://doi.org/10.3389/fpls.2012.00295
Wang, W.-Q., Møller, I. M. & Song, S.-Q. (2012). Proteomic analysis of embryonic axis of Pisum sativum seeds during germination and identification of proteins associated with loss of desiccation tolerance. Journal of Proteomics, 77, 68-86. https://doi.org/10.1016/j.jprot.2012.07.005
Pedersen, J. M., Fredsøe, J. C., Rødgaard, M. T., Andreasen, L., Mundbjerg, K., Kruhøffer, M., Brinch, M., Schierup, M. H., Bjergbæk, L. & Andersen, A. H. (2012). DNA Topoisomerases Maintain Promoters in a State Competent for Transcriptional Activation in Saccharomyces cerevisiae. PLoS Genetics, 8(12 e1003128), 1-15. https://doi.org/10.1371/journal.pgen.1003128
Sanggaard, K. W., Danielsen, C. C., Wogensen, L., Vinding, M. S., Rydtoft, L. M., Mortensen, M. B., Karring, H., Nielsen, N. C., Wang, T., Thøgersen, I. B. & Enghild, J. J. (2012). Unique structural features facilitate lizard tail autotomy. PLoS One, 7(12), e51803. https://doi.org/10.1371/journal.pone.0051803
Dueholm, M. S., Albertsen, M., Otzen, D. & Nielsen, P. H. (2012). Curli functional amyloid systems are phylogenetically widespread and display large diversity in operon and protein structure. PLoS One, 7(12), e51274. https://doi.org/10.1371/journal.pone.0051274
Oeemig, J. S., Lynggaard, C., Knudsen, D., Hansen, F. T., Noergaard, K. D., Schneider, T., Vad, B. S., Sandvang, D., Nielsen, L., Neve, S., Kristensen, H.-H., Sahl, H.-G., Otzen, D. & Wimmer, R. (2012). Eurocin, a new fungal defensin: structure, lipid binding and its mode of action. Journal of Biological Chemistry, 7, 42361-42372. https://doi.org/10.1074/jbc.M112.382028
Abdallah, M. W., Hougaard, D. M., Nørgaard-Pedersen, B., Grove, J., Bonefeld-Jørgensen, E. C. & Mortensen, E. L. (2012). Infections during pregnancy and after birth, and the risk of autism spectrum disorders: A register-based study utilizing a danish historic birth cohort. Turk Psikiyatri Dergisi, 23(4), 229-236.
Abdallah, M., Pearce, B. D., Larsen, N., Greaves-Lord, K., Nørgaard-Pedersen, B., Hougaard, D. M., Mortensen, E. L. & Grove, J. (2012). Amniotic Fluid MMP-9 and Neurotrophins in Autism Spectrum Disorders: An Exploratory Study. Autism Research, 5(6), 428-33. https://doi.org/10.1002/aur.1254
Juul, S., Nielsen, C. J. F., Labouriau, R., Roy, A., Tesauro, C., Jensen, P. W., Harmsen, C., Kristoffersen, E. L., Chiu, Y.-L., Hougaard, R. F., Fiorani, P., Cox-Singh, J., Tordrup, D. P., Koch, J. E., Bienvenu, A.-L., Desideri, A., Picot, S., Petersen, E., Leong, K. W. ... Knudsen, B. R. (2012). Droplet Microfluidics Platform for Highly Sensitive and Quantitative Detection of Malaria-Causing Plasmodium Parasites Based on Enzyme Activity Measurement. A C S Nano, 6(12), 10676-10683. https://doi.org/10.1021/nn3038594
Lebeck, J., Ostergård, T., Rojek, A., Füchtbauer, E.-M., Lund, S. & Prætorius, J. (2012). Gender-specific effect of physical training on AQP7 protein expression in human adipose tissue. Acta Diabetologica, 49(Suppl 1), S215-S226. https://doi.org/10.1007/s00592-012-0430-1
Seren, Ü., Vilhjálmsson, B. J., Horton, M. W., Meng, D., Forai, P., Huang, Y. S., Long, Q., Segura, V. & Nordborg, M. (2012). GWAPP: a web application for genome-wide association mapping in Arabidopsis. Plant Cell, 24(12), 4793-805. https://doi.org/10.1105/tpc.112.108068
Saetre, P., Grove, J., Børglum, A., Mors, O., Werge, T. M., Andreassen, O. A., Vares, M., Agartz, I., Terenius, L. & Jönsson, E. G. (2012). Methylenetetrahydrofolate reductase (MTHFR) C677T polymorphism and age at onset of schizophrenia: no consistent evidence for an association in the Nordic population. American Journal of Medical Genetics. Part B: Neuropsychiatric Genetics, 159B(8).
Fedosov, S., Brask, J. & Xu, X. (2012). Microtitration of Free Fatty Acids in Oil and Biodiesel Samples Using Absorbance and/or Fluorescence of Pyranine. Journal of the American Oil Chemists' Society, 89(12), 2155-2163. https://doi.org/10.1007/s11746-012-2117-8
Doganli, C., Kjaer-Sørensen, K., Knoeckel, C., Beck, H. C., Nyengaard, J. R., Honoré, B., Nissen, P., Ribera, A., Oxvig, C. & Lykke-Hartmann, K. (2012). The α2Na+/K+-ATPase is critical for skeletal and heart muscle function in zebrafish. Journal of Cell Science, 125, 6166-6175. https://doi.org/10.1242/jcs.115808
De Luis, A., Markmann, K., Cognat, V., Holt, D. B., Charpentier, M., Parniske, M., Stougaard, J. & Voinnet, O. (2012). Two MicroRNAs Linked to Nodule Infection and Nitrogen-Fixing Ability in the Legume Lotus japonicus. Plant Physiology, 160(4), 2137-2154. https://doi.org/10.1104/pp.112.204883
Bisgaard, C. F., Bak, S., Christensen, T., Jensen, O. N., Enghild, J. J. & Wiborg, O. (2012). Vesicular signalling and immune modulation as hedonic fingerprints: proteomic profiling in the chronic mild stress depression model. Journal of Psychopharmacology, 26(12), 1569-1583. https://doi.org/10.1177/0269881112460110
Zadegan, R. M., Jepsen, M. DE., Thomsen, K. E., Okholm, A. H., Schaffert, D. H., Andersen, E. S., Birkedal, V. & Kjems, J. (2012). Construction of a 4 Zeptoliters Switchable 3D DNA Box Origami. A C S Nano, 6(11), 10050-10053. https://doi.org/10.1021/nn303767b
Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H.-J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C. ... Schook, L. B. (2012). Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491(7424), 393-398. https://doi.org/10.1038/nature11622
Sükösd, Z., Knudsen, B., Kjems, J. & Pedersen, C. N. S. (2012). PPfold 3.0: fast RNA secondary structure prediction using phylogeny and auxiliary data. Bioinformatics, 28(20), 2691-2692. https://doi.org/10.1093/bioinformatics/bts488
Taschner, M., Vetter, M. M. & Lorentzen, E. (2012). Atomic resolution structure of human α-tubulin acetyltransferase bound to acetyl-CoA. Proceedings of the National Academy of Sciences (PNAS), 109(48), 19649-19654.
Castelli, S., Coletta, A., D'Annessa, I., Fiorani, P., Tesauro, C. & Desideri, A. (2012). Interaction between natural compounds and human topoisomerase i. Biological Chemistry, 393(11), 1327-1340. https://doi.org/10.1515/hsz-2012-0240
Schulze, W. X., Sanggaard, K. W., Kreuzer, I., Knudsen, A. D., Bemm, F., Thøgersen, I. B., Brautigam, A., Thomsen, L. R., Schliesky, S., Dyrlund, T. F., Escalante-Perez, M., Becker, D., Schultz, J., Karring, H., Weber, A., Højrup, P., Hedrich, R. & Enghild, J. J. (2012). The protein composition of the digestive fluid from the Venus flytrap sheds light on prey digestion mechanisms. Molecular and Cellular Proteomics, 11(11), 1306-1319. https://doi.org/10.1074/mcp.M112.021006
Foldbjerg, R., Irving, E. S., Hayashi, Y., Sutherland, D., Thorsen, K., Autrup, H. & Beer, C. (2012). Global gene expression profiling of human lung epithelial cells after exposure to nanosilver. Toxicological Sciences, 130(1), 145-157. https://doi.org/10.1093/toxsci/kfs225
Hansen, H. G., Schmidt, J. D., Søltoft, C. L., Ramming, T., Geertz-Hansen, H. M., Christensen, B., Sørensen, E. S., Juncker, A. S., Appenzeller-Herzog, C. & Ellgaard, L. (2012). Hyperactivity of the Ero1α oxidase elicits endoplasmic reticulum stress but no broad antioxidant response. Journal of Biological Chemistry, 287(47), 39513-39523. https://doi.org/10.1074/jbc.M112.405050
Liao, J., Singh, S., Hossain, M. S., Andersen, S. U., Ross, L., Bonetta, D., Zhou, Y., Sato, S., Tabata, S., Stougaard, J., Szczyglowski, K. & Parniske, M. (2012). Negative regulation of CCaMK is essential for symbiotic infection. Plant Journal, 72(4), 572-584. https://doi.org/10.1111/j.1365-313X.2012.05098.x
Bøggild, A., Sofos, N., Andersen, K. R., Feddersen, A., Easter, A. D., Passmore, L. A. & Brodersen, D. (2012). The Crystal Structure of the Intact E. coli RelBE Toxin-Antitoxin Complex Provides the Structural Basis for Conditional Cooperativity. Structure, 20(10), 1641–1648. https://doi.org/10.1016/j.str.2012.08.017
Mertens, H. D. T., Kjærgaard, M., Mysling, S., Gårdsvoll, H., Jørgensen, T. J. D., Svergun, D. I. & Ploug, M. (2012). A flexible multidomain structure drives the function of the urokinase-type plasminogen activator receptor (uPAR). Journal of Biological Chemistry, 287(41), 34304-15. https://doi.org/10.1074/jbc.M112.398404
Andreasen, M., Nielsen, S. B., Runager, K., Christiansen, G., Nielsen, N. C., Enghild, J. J. & Otzen, D. (2012). Polymorphic Fibrillation of the Destabilized Fourth Fasciclin-1 Domain Mutant A546T of the Transforming Growth Factor-β-induced Protein (TGFBIp) Occurs through Multiple Pathways with Different Oligomeric Intermediates. Journal of Biological Chemistry, 287(41), 34730-34742. https://doi.org/10.1074/jbc.M112.379552
Andersen, P. K., Lykke-Andersen, S. & Jensen, T. H. (2012). Promoter proximal polyadenylation sites reduce transcription activity. Genes & Development, 26, 2169-2179. https://doi.org/10.1101/gad.189126.112
Daniel, C., Venø, M. T., Ekdahl, Y., Kjems, J. & Öhman, M. (2012). A distant cis acting intronic element induces site-selective RNA editing. Nucleic Acids Research, 40(19), 9876-9886. https://doi.org/10.1093/nar/gks691
Valero Moreno, J., Escuder, B., Miravet, J. F. & de Mendoza, J. (2012). Anion-responsive diguanidinium-based chiral organogelators. Chemistry - A European Journal, 18(41), 13038-13047. http://europepmc.org/abstract/med/22936304
Blechingberg, J., Luo, Y., Bolund, L., Damgaard, C. K. & Nielsen, A. L. (2012). Gene Expression Responses to FUS, EWS, and TAF15 Reduction and Stress Granule Sequestration Analyses Identifies FET-Protein Non-Redundant Functions. PLoS One, 7(9), e46251. https://doi.org/10.1371/journal.pone.0046251
Rattan, S. (2012). Healthy ageing - from molecules to hormesis. New Biotechnology, 29(supplement), S20. https://doi.org/10.1016/j.nbt.2012.08.047
Andersen, C. B. F., Torvund-Jensen, M., Nielsen, M. J., de Oliveira, C. L. P., Hersleth, H.-P., Andersen, N. H., Pedersen, J. S., Andersen, G. R. & Moestrup, S. K. (2012). Structure of the haptoglobin-haemoglobin complex. Nature, 489(7416), 456-459. https://doi.org/10.1038/nature11369
Düring, L., Thorsen, M., Petersen, D. S., Køster, B., Jensen, T. H. & Holmberg, S. (2012). MRN1 implicates chromatin remodeling complexes and architectural factors in mRNA maturation. PLoS One, 7(9). https://doi.org/10.1371/journal.pone.0044373
Kidmose, R. T., Laursen, N. S., Dobó, J., Kjaer, T. R., Sirotkina, S., Yatime, L., Sottrup-Jensen, L., Thiel, S., Gál, P. & Andersen, G. R. (2012). Structural basis for activation of the complement system by component C4 cleavage. Proceedings of the National Academy of Sciences (PNAS), 109(38), 15425-15430. https://doi.org/10.1073/pnas.1208031109
Andersen, K. K., Wang, H. & Otzen, D. (2012). A Kinetic Analysis of the Folding and Unfolding of OmpA in Urea and Guaninidinium Chloride: Single and Parallel Pathways. Biochemistry, 51(42), 8371-8383. https://doi.org/10.1021/bi300974y
Laursen, N. S., Magnani, F., Gottfredsen, R. H., Petersen, S. V. & Andersen, G. R. (2012). Structure, function and control of complement C5 and its proteolytic fragments. Current Molecular Medicine, 12(8), 1083-1097. https://doi.org/10.2174/156652412802480925
Dasgupta, I., Sanglas, L., Enghild, J. J. & Lindberg, I. (2012). The Neuroendocrine Protein 7B2 Is Intrinsically Disordered. Biochemistry, 51(38), 7456–7464. https://doi.org/10.1021/bi300871k
Bjergbæk, L. (2012). DNA repair protocols. (3. ed. / ed.) Humana Press.
Mizuno, N., Taschner, M., Engel, B. D. & Lorentzen, E. (2012). Structural studies of ciliary components. J. Mol. Biol., 422(2), 163-180.
Eriksen, H.-L. F., Mortensen, E. L., Kilburn, T. R., Underbjerg, M., Bertrand, J., Støvring, H., Wimberley, T., Grove, J. & Kesmodel, U. S. (2012). The effects of low to moderate alcohol exposure in early pregnancy on IQ in 5-year-old children. B J O G, 119(10), 1191-1200. https://doi.org/10.1111/j.1471-0528.2012.03394.x
Korte, A., Vilhjálmsson, B. J., Segura, V., Platt, A., Long, Q. & Nordborg, M. (2012). A mixed-model approach for genome-wide association studies of correlated traits in structured populations. Nature Genetics, 44(9), 1066-71. https://doi.org/10.1038/ng.2376
Sztukowska, M., Veillard, F., Potempa, B., Bogyo, M., Enghild, J. J., Thøgersen, I. B., Nguyen, K.-A. & Potempa, J. (2012). Disruption of gingipain oligomerization into non-covalent cell-surface attached complexes. World Journal of Biological Chemistry, 393(9), 971-977. https://doi.org/10.1515/hsz-2012-0175
Hofbauer, S., Gysel, K., Mlynek, G., Kostan, J., Hagmüller, A., Daims, H., Furtmüller, P. G., Djinović-Carugo, K. & Obinger, C. (2012). Impact of subunit and oligomeric structure on the thermal and conformational stability of chlorite dismutases. B B A - Molecular and Cell Biology of Lipids, 1824(9), 1031-1038. https://doi.org/10.1016/j.bbapap.2012.05.012

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Lisbeth Heilesen