Peer-reviewed articles

Publications from the department

Journal covers made by researchers from our department

Latest peer-reviewed publications at MBG

Sort by: Date | Author | Title

Displaying results 851 to 62 out of 62

Peer-reviewed publications at MBG - all years

Sort by: Date | Author | Title

Christiansen, M. P. V., Rønne, N. & Hammer, B. (2022). Atomistic global optimization X: A Python package for optimization of atomistic structures. Journal of Chemical Physics, 157(5), Article 054701. https://doi.org/10.1063/5.0094165

Franceschini, S., Grelet, C., Leblois, J., Gengler, N., Soyeurt, H. & GplusE Consortium (2022). Can unsupervised learning methods applied to milk recording big data provide new insights into dairy cow health? Journal of Dairy Science, 105(8), 6760-6772. https://doi.org/10.3168/jds.2022-21975

Sokac, M., Ahrenfeldt, J., Litchfield, K., Watkins, T. B. K., Knudsen, M., Dyrskjøt, L., Jakobsen, M. R. & Birkbak, N. J. (2022). Classifying cGAS-STING Activity Links Chromosomal Instability with Immunotherapy Response in Metastatic Bladder Cancer. Cancer Research Communications, 2(8), 762-771. https://doi.org/10.1158/2767-9764.CRC-22-0047, https://doi.org/10.1158/2767-9764.CRC-22-0047

Rajagopal, V. M., Duan, J., Vilar-Ribó, L., Grove, J., Zayats, T., Ramos-Quiroga, J. A., Satterstrom, F. K., Artigas, M. S., Bybjerg-Grauholm, J., Bækvad-Hansen, M., Als, T. D., Rosengren, A., Daly, M. J., Neale, B. M., Nordentoft, M., Werge, T., Mors, O., Hougaard, D. M., Mortensen, P. B. ... Demontis, D. (2022). Differences in the genetic architecture of common and rare variants in childhood, persistent and late-diagnosed attention-deficit hyperactivity disorder. Nature Genetics, 54(8), 1117-1124. https://doi.org/10.1038/s41588-022-01143-7

Fields, B., Moffat, E. K., Harrison, E., Andersen, S. U., Young, J. P. W. & Friman, V.-P. (2022). Genetic variation is associated with differences in facilitative and competitive interactions in the Rhizobium leguminosarum species complex. Environmental Microbiology, 24(8), 3463-3485. https://doi.org/10.1111/1462-2920.15720

Schmauck-Medina, T., Molière, A., Lautrup, S., Zhang, J., Chlopicki, S., Madsen, H. B., Cao, S., Soendenbroe, C., Mansell, E., Vestergaard, M. B., Li, Z., Shiloh, Y., Opresko, P. L., Egly, J. M., Kirkwood, T., Verdin, E., Bohr, V. A., Cox, L. S., Stevnsner, T. ... Fang, E. F. (2022). New hallmarks of ageing: a 2022 Copenhagen ageing meeting summary. Aging, 14(16), 6829-6839. https://doi.org/10.18632/aging.204248

Coutant, M. P., Malmkvist, J., Kaiser, M., Foldager, L. & Herskin, M. S. (2022). On-farm administration of local anaesthetic and surgical castration of piglets: acute behavioural and physiological consequences. In M. Kjosevski, S. Waiblinger & V. Ilieski (Eds.), Proceedings of the 55th Congress of the ISAE: Animal Behaviour and Beyond (pp. 19-19). https://www.applied-ethology.org/res/ISAE_2022_PROCEEDINGS_e-version.pdf

Coutant, M. P., Malmkvist, J., Kaiser, M. Ø., Foldager, L. & Herskin, M. S. (2022). Piglets' acute responses to procaine-based local anesthetic injection and surgical castration: Effects of two volumes of anesthetic. Frontiers in Pain Research, 3, Article 943138. https://doi.org/10.3389/fpain.2022.943138

Kristensen, M. F., Sorensen, E. S., Del Rey, Y. C. & Schlafer, S. (2022). Prevention of Initial Bacterial Attachment by Osteopontin and Other Bioactive Milk Proteins. Biomedicines, 10(8), Article 1922. https://doi.org/10.3390/biomedicines10081922

Antaki, D., Guevara, J., Maihofer, A. X., Klein, M., Gujral, M., Grove, J., Carey, C. E., Hong, O., Arranz, M. J., Hervas, A., Corsello, C., Vaux, K. K., Muotri, A. R., Iakoucheva, L. M., Courchesne, E., Pierce, K., Gleeson, J. G., Robinson, E. B., Nievergelt, C. M. & Sebat, J. (2022). Publisher Correction: A phenotypic spectrum of autism is attributable to the combined effects of rare variants, polygenic risk and sex. Nature Genetics, 54(8), Article 1259. https://doi.org/10.1038/s41588-022-01145-5

Henriksen, M. L., Nielsen, C., Pedersen, D., Andersen, G. R., Thiel, S., Palarasah, Y. & Hansen, S. W. K. (2022). Quantification of the pro-form of human complement component factor D (adipsin). Journal of Immunological Methods, 507, Article 113295. https://doi.org/10.1016/j.jim.2022.113295

Jensen, R. K., Pedersen, H., Lorentzen, J., Laursen, N. S., Vorup-Jensen, T. & Andersen, G. R. (2022). Structural insights into the function-modulating effects of nanobody binding to the integrin receptor α_Mβ₂. Journal of Biological Chemistry, 298(8), Article 102168. https://doi.org/10.1016/j.jbc.2022.102168

Harwood, S. L., Diep, K., Nielsen, N. S., Jensen, K. T. & Enghild, J. J. (2022). The conformational change of the protease inhibitor α₂-macroglobulin is triggered by the retraction of the cleaved bait region from a central channel. Journal of Biological Chemistry, 298(8), Article 102230. https://doi.org/10.1016/j.jbc.2022.102230

Møhlenberg, M., Eriksen, P. L., Laursen, T. L., Nielsen, M. B., Hamilton-Dutoit, S. J., Grønbæk, H., Hartmann, R. & Thomsen, K. L. (2022). The presence of interferon affects the progression of non-alcoholic fatty liver disease. Genes and Immunity, 23(5), 157–165. https://doi.org/10.1038/s41435-022-00176-6

Greve, A. N., Jepsen, J. R. M., Mortensen, E. L., Uher, R., Mackenzie, L., Foldager, L., Gantriis, D., Burton, B. K., Ellersgaard, D., Christiani, C. J., Spang, K. S., Hemager, N., Uddin, J., Henriksen, M. T., Zahle, K. K., Stadsgaard, H., Plessen, K. J., Thorup, A. A. E., Nordentoft, M. ... Bliksted, V. (2022). Transmission of intelligence, working memory, and processing speed from parents to their seven-year-old offspring is function specific in families with schizophrenia or bipolar disorder. Schizophrenia Research, 246, 195-201. https://doi.org/10.1016/j.schres.2022.06.032

Christensen, D. S., Ahrenfeldt, J., Sokač, M., Kisistók, J., Thomsen, M. K., Maretty, L., McGranahan, N. & Birkbak, N. J. (2022). Treatment Represents a Key Driver of Metastatic Cancer Evolution. Cancer Research, 82(16), 2918-2927. https://doi.org/10.1158/0008-5472.CAN-22-0562

Meisl, G., Xu, C. K., Taylor, J. D., Michaels, T. C. T., Levin, A., Otzen, D., Klenerman, D., Matthews, S., Linse, S., Andreasen, M. & Knowles, T. P. J. (2022). Uncovering the universality of self-replication in protein aggregation and its link to disease. Science Advances, 8(32), Article eabn6831. https://doi.org/10.1126/sciadv.abn6831

Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Kaiser, M., Thodberg, K. & Herskin, M. S. (2022). Validation of behavioural sampling techniques for 20-25 kg pigs during 23-hour transport. In M. Kjosevski, S. Waiblinger & V. Ilieski (Eds.), Proceedings of the 55th Congress of the ISAE: Animal Behaviour and Beyond (pp. 167-167). https://www.applied-ethology.org/res/ISAE_2022_PROCEEDINGS_e-version.pdf

Neumann, C., Focht, D., Trampari, S., Lyons, J. A. & Nissen, P. (2022). Variations on a theme: Crystal forms of the amino-acid transporter MhsT. Acta Crystallographica Section F: Structural Biology Communications, 78(Part 8), 297-305. https://doi.org/10.1107/S2053230X22007154

Gerlach, P., Garland, W., Lingaraju, M., Salerno-Kochan, A., Bonneau, F., Basquin, J., Jensen, T. H. & Conti, E. (2022). Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome. Molecular Cell, 82(13), 2505-2518.e7. https://doi.org/10.1016/j.molcel.2022.04.011

Cai, Z., Wu, X., Thomsen, B. & Sahana, G. (2022). Fine-mapping young-stock survival QTL on chromosome 6 in Nordic Red Dairy Cattle. In WCGALP 2022 Programme book Wageningen Academic Publishers. https://www.wageningenacademic.com/pb-assets/wagen/WCGALP2022/66_006.pdf

Sønderby, T. V., Najarzadeh, Z. & Otzen, D. E. (2022). Functional Bacterial Amyloids: Understanding Fibrillation, Regulating Biofilm Fibril Formation and Organizing Surface Assemblies. Molecules, 27(13), Article 4080. https://doi.org/10.3390/molecules27134080

Rowe, T. B., Stafford, T. W., Fisher, D. C., Enghild, J. J., Quigg, J. M., Ketcham, R. A., Sagebiel, J. C., Hanna, R. & Colbert, M. W. (2022). Human Occupation of the North American Colorado Plateau ∼37,000 Years Ago. Frontiers in Ecology and Evolution, 10, Article 903795. https://doi.org/10.3389/fevo.2022.903795

Jepsen, M. R., Østergaard, J. A., Conover, C. A., Wogensen, L., Birn, H., Krag, S. P., Fenton, R. A. & Oxvig, C. (2022). Increased activity of the metalloproteinase PAPP-A promotes diabetes-induced glomerular hypertrophy. Metabolism: Clinical and Experimental, 132, Article 155218. https://doi.org/10.1016/j.metabol.2022.155218

Pedersen, J. G., Sokac, M., Sørensen, B. S., Luczak, A. A., Aggerholm-Pedersen, N., Birkbak, N. J., Øllegaard, T. H. & Jakobsen, M. R. (2022). Increased Soluble PD-1 Predicts Response to Nivolumab plus Ipilimumab in Melanoma. Cancers, 14(14), Article 3342. https://doi.org/10.3390/cancers14143342

Sadik, A., Dardani, C., Pagoni, P., Havdahl, A., Stergiakouli, E., Khandaker, G. M., Sullivan, S. A., Zammit, S., Jones, H. J., Davey Smith, G., Dalman, C., Karlsson, H., Gardner, R. M., Rai, D. & The iPSYCH Autism Spectrum Disorder Working Group (2022). Parental inflammatory bowel disease and autism in children. Nature Medicine, 28(7), 1406-1411. https://doi.org/10.1038/s41591-022-01845-9

Sahin, C., Østerlund, E. C., Österlund, N., Costeira-Paulo, J., Pedersen, J. N., Christiansen, G., Nielsen, J., Grønnemose, A. L., Amstrup, S. K., Tiwari, M. K., Rao, R. S. P., Bjerrum, M. J., Ilag, L. L., Davies, M. J., Marklund, E. G., Pedersen, J. S., Landreh, M., Møller, I. M., Jørgensen, T. J. D. & Otzen, D. E. (2022). Structural Basis for Dityrosine-Mediated Inhibition of α-Synuclein Fibrillization. Journal of the American Chemical Society, 144(27), 11949-11954. https://doi.org/10.1021/jacs.2c03607

Bisiak, F., Chrenková, A., Zhang, S. D., Pedersen, J. N., Otzen, D. E., Zhang, Y. E. & Brodersen, D. E. (2022). Structural variations between small alarmone hydrolase dimers support different modes of regulation of the stringent response. Journal of Biological Chemistry, 298(7), Article 102142. https://doi.org/10.1016/j.jbc.2022.102142

Pedersen, H., Jensen, R. K., Hansen, A. G., Petersen, S. V., Thiel, S., Laursen, N. S. & Andersen, G. R. (2022). Structure-Guided Engineering of a Complement Component C3-Binding Nanobody Improves Specificity and Adds Cofactor Activity. Frontiers in Immunology, 13, Article 872536. https://doi.org/10.3389/fimmu.2022.872536

Khateb, H., Sørensen, R. S., Cramer, K., Eklund, A. S., Kjems, J., Meyer, R. L., Jungmann, R. & Sutherland, D. S. (2022). The Role of Nanoscale Distribution of Fibronectin in the Adhesion of Staphylococcus aureus Studied by Protein Patterning and DNA-PAINT. ACS Nano, 16(7), 10392-10403. https://doi.org/10.1021/acsnano.2c00630

Renaud, G., Nørgaard, M., Lindberg, J., Grönberg, H., De Laere, B., Jensen, J. B., Borre, M., Andersen, C. L., Sørensen, K. D., Maretty, L. & Besenbacher, S. (2022). Unsupervised detection of fragment length signatures of circulating tumor DNA using non-negative matrix factorization. eLife, 11, Article e71569. https://doi.org/10.7554/ELIFE.71569

Dyla, M., González Foutel, N. S., Otzen, D. E. & Kjaergaard, M. (2022). The optimal docking strength for reversibly tethered kinases. Proceedings of the National Academy of Sciences (PNAS), 119(25), Article e2203098119. https://doi.org/10.1073/pnas.2203098119

Hartmann, S., Ling, M., Dreyer, L. S. A., Zipori, A., Finster, K., Grawe, S., Jensen, L. Z., Borck, S., Reicher, N., Niedermeier, D., Jones, N. C., Hoffmann, S. V., Wex, H., Rudich, Y., Boesen, T. & Santl-Temkiv, T. (2022). Structure and Protein-Protein Interactions of Ice Nucleation Proteins Drive Their Activity. Frontiers in Microbiology, 13, Article 872306. https://doi.org/10.3389/fmicb.2022.872306

Bofill-De Ros, X. (2022). RNA targeting using CasRx can prevent aminoglycoside-induced hearing loss. Molecular Therapy Nucleic Acids, 28, 756-757. https://doi.org/10.1016/j.omtn.2022.05.007

Wu, Y., Biswas, D., Usaite, I., Angelova, M., Boeing, S., Karasaki, T., Veeriah, S., Czyzewska-Khan, J., Morton, C., Joseph, M., Hessey, S., Reading, J., Georgiou, A., Al-Bakir, M. & TRACERx Consortium (2022). A local human Vδ1 T cell population is associated with survival in nonsmall-cell lung cancer. Nature Cancer, 3(6), 696-709. https://doi.org/10.1038/s43018-022-00376-z

Dijkman, R., Verma, A. K., Selvaraj, M., Ghimire, R., Gad, H. H., Hartmann, R., More, S., Perlman, S., Thiel, V. & Channappanavar, R. (2022). Effective Interferon Lambda Treatment Regimen To Control Lethal MERS-CoV Infection in Mice. Journal of Virology, 96(11), Article e00364-22. https://doi.org/10.1128/jvi.00364-22

Märcher, A., Kumar, V., Andersen, V. L., El-Chami, K., Nguyen, T. J. D., Skaanning, M. K., Rudnik-Jansen, I., Nielsen, J. S., Howard, K. A., Kjems, J. & Gothelf, K. V. (2022). Functionalized Acyclic (l)-Threoninol Nucleic Acid Four-Way Junction with High Stability In Vitro and In Vivo. Angewandte Chemie - International Edition, 61(24), Article 202115275. https://doi.org/10.1002/anie.202115275

Bataillon, T., Ezard, T. H. G., Kopp, M. & Masel, J. (2022). Genetics of adaptation and fitness landscapes: From toy models to testable quantitative predictions. Evolution, 76(6), 1104-1107. https://doi.org/10.1111/evo.14477

Duncan, C. J. A., Skouboe, M. K., Howarth, S., Hollensen, A. K., Chen, R., Børresen, M. L., Thompson, B. J., Stremenova Spegarova, J., Hatton, C. F., Stæger, F. F., Andersen, M. K., Whittaker, J., Paludan, S. R., Jørgensen, S. E., Thomsen, M. K., Mikkelsen, J. G., Heilmann, C., Buhas, D., Øbro, N. F. ... Mogensen, T. H. (2022). Life-threatening viral disease in a novel form of autosomal recessive IFNAR2 deficiency in the Arctic. The Journal of Experimental Medicine, 219(6), Article e20212427. https://doi.org/10.1084/jem.20212427

Quilbé, J., Montiel, J., Arrighi, J. F. & Stougaard, J. (2022). Molecular Mechanisms of Intercellular Rhizobial Infection: Novel Findings of an Ancient Process. Frontiers in Plant Science, 13, Article 922982. https://doi.org/10.3389/fpls.2022.922982

Wigdor, E. M., Weiner, D. J., Grove, J., Fu, J. M., Thompson, W. K., Carey, C. E., Baya, N., van der Merwe, C., Walters, R. K., Satterstrom, F. K., Palmer, D. S., Rosengren, A., Bybjerg-Grauholm, J., Hougaard, D. M., Mortensen, P. B., Daly, M. J., Talkowski, M. E., Sanders, S. J., Bishop, S. L. ... iPSYCH Consortium (2022). The female protective effect against autism spectrum disorder. Cell Genomics, 2(6), Article 100134. https://doi.org/10.1016/j.xgen.2022.100134

Mogensen, E. H., Poulsen, E. T., Thøgersen, I. B., Yamamoto, K., Brüel, A. & Enghild, J. J. (2022). The low-density lipoprotein receptor-related protein 1 (LRP1) interactome in the human cornea. Experimental Eye Research, 219, Article 109081. https://doi.org/10.1016/j.exer.2022.109081

Møhlenberg, M., O’Brien, T. R. & Hartmann, R. (2022). The role of IFNL4 in liver inflammation and progression of fibrosis. Genes and Immunity, 23(3-4), 111-117. https://doi.org/10.1038/s41435-022-00173-9