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Department of Molecular Biology and Genetics

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Latest peer-reviewed publications at MBG

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Displaying results 3951 to 99 out of 99

Peer-reviewed publications at MBG - all years

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Hebsgaard, M. B., Gilbert, M. T. P., Arneborg, J., Heyn, P., Allentoft, M. E., Bunce, M., Munch, K., Schweger, C. & Willerslev, E. (2009). 'The Farm Beneath the Sand' - An archaeological case study on ancient 'dirt' DNA. Antiquity, 83(320), 430-444. https://doi.org/10.1017/S0003598X00098537

Glémin, S. & Bataillon, T. (2009). A comparative view of the evolution of grasses under domestication. New Phytologist, 183(2), 273-90. https://doi.org/10.1111/j.1469-8137.2009.02884.x

Besenbacher, S., Pedersen, C. S. & Mailund, T. (2009). A fast algorithm for genome wide haplotype pattern mining. BMC Bioinformatics, (suppl. 1), 772. https://doi.org/10.1186/1471-2105-10-S1-S74

Nielsen, I., Bentsen, I. B., Lisby, M., Hansen, S., Mundbjerg, K., Andersen, A. H. & Bjergbæk, L. (2009). A Flp-nick system to study repair of a single protein-bound nick in vivo. Nature Methods, 753-7.

Bramsen, J. B., Laursen, M. B., Nielsen, A. F., Hansen, T. B., Bus, C., Langkjær, N., Babu, B. R., Højland, T., Abramov, M., Van Aerschot, A., Odadzic, D., Smicius, R., Haas, J., Andree, C., Barman, J., Wenska, M., Srivastava, P., Zhou, C., Honcharenko, D. ... Kjems, J. (2009). A large-scale chemical modification screen identifies design rules to generate siRNAs with high activity, high stability and low toxicity. Nucleic Acids Research, 37(9), 2867-81. https://doi.org/10.1093/nar/gkp106

Bertioli, D., Moretzsohn, M., Madsen, L., Sandal, N., Leal-Bertioli, S., Guimaraes, P., Hougaard, B., Fredslund, J., Schauser, L., Nielsen, A., Sato, S., Tabata, S., Cannon, S. & Stougaard, J. (2009). An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes. BMC Genomics, 10(1), 45. https://doi.org/10.1186/1471-2164-10-45

Dutheil, J., Ganapathy, G., Hobolth, A., Mailund, T., Uyenoyama, M. & Schierup, M. H. (2009). Ancestral population genomics: the coalescent hidden Markov model approach. Genetics, 183(1), 259–274. https://doi.org/10.1534/genetics.109.103010

Hedegaard, C., Bendixen, E., Jensen, P. H., Bendixen, C. & Larsen, K. (2009). An Exonic Insertion Encodes an Alanine Stretch in Porcine Synapsin I. Biochemical Genetics, 47(11-12), 812-816. https://doi.org/10.1007/s10528-009-9279-6

Wittenborn, T., Nygaard, J. V., Horsman, M. R., Vorup-Jensen, T., Kjems, J., Thim, T., Nielsen, T., Larsen, E. K. U. & Falk, E. (2009). A Novel in Vivo Angiogenesis Mouse Model. Arteriosclerosis, Thrombosis, and Vascular Biology, (7).

Karim, A. Y., Kulczycka, M., Kantyka, T., Dubin, G., Jabaiah, A., Daugherty, P. S., Thogersen, I. B., Enghild, J. J., Nguyen, K.-A. & Potempa, J. (2009). A novel matrix metalloprotease-like enzyme (karilysin) of the periodontal pathogen Tannerella forsythia ATCC 43037. Biological Chemistry. https://doi.org/10.1515/BC.2010.009

Sørensen, M., Diaz, R. G., Müller-Ohldach, M., Werner, A., Bohr, V., Osiewacz, H. D. & Stevnsner, T. V. (2009). A potential impact of DNA repair on ageing and lifespan in the ageing model organism Podospora anserine: decrease in mitochondrial DNA repair activity during ageing. Mechanisms of Ageing and Development, 130(8), 487-496.

Mailund, T., Nielsen, J. & Pedersen, C. S. (2009). A Quadratic Time Algorithm for Computing the Quartet Distance between Two General Trees. In Proceedings of IJCBS 2009 (pp. 565-568). IEEE Computer Society Press. https://doi.org/10.1109/IJCBS.2009.42

Vingborg, R. K. K., Gregersen, V. R., Zhan, B., Panitz, F., Hoj, A., Sorensen, K. K., Madsen, L. B., Larsen, K., Hornshøj, H., Wang, X. & Bendixen, C. (2009). A robust linkage map of the porcine autosome based on gene-associated SNPs. BMC Genomics, 10(134). https://doi.org/10.1186/1471-2164-10-134

Qu, X., Lykke-Andersen, S., Nasser, T., Saguez, C., Bertrand, E., Jensen, T. H. & Moore, C. (2009). Assembly of an export-competent mRNP is needed for efficient release of the 3' end processing complex after polyadenylation. Molecular and Cellular Biology, 29(19).

Kristensen, T. G., Nielsen, J. & Pedersen, C. N. S. (2009). A tree based method for the rapid screening of chemical fingerprints. Lecture Notes in Computer Science, 5724, 194-205. https://doi.org/10.1007/978-3-642-04241-6_17

Rasmussen, J. T. (2009). Bioactivity of milk fat globule membrane proteins. Australian Journal of Dairy Technology, 64(1), 63-67.

Valnickova, Z., Thaysen-Andersen, M., Højrup, P., Christensen, T., Sanggaard, K. W., Kristensen, T. & Enghild, J. J. (2009). Biochemical characterization of bovine plasma thrombin-activatable fibrinolysis inhibitor (TAFI). BMC Biochemistry, 10, 13. https://doi.org/10.1186/1471-2091-10-13

Wæhrens, L. N., Heegaard, C. W., Gilbert, G. E. & Rasmussen, J. T. (2009). Bovine Lactadherin as a Calcium-independent Imaging Agent of Phosphatidylserine Expressed on the Surface of Apoptotic HeLa Cells. Journal of Histochemistry and Cytochemistry, 57(10), 907-914.

Beyschau Andersen, C., Yagi, H., Manno, M., Martorana, V., Ban, T., Christiansen, G., Otzen, D., Goto, Y. & Rischel, C. (2009). Branching in amyloid fibril growth. Biophysical Journal, 96(4), 1529-36. https://doi.org/10.1016/j.bpj.2008.11.024

Grozav, A. G., Chikamori, K., Kozuki, T., Grabowski, D. R., Bukowski, R. M., Kinter, M., Andersen, A. H., Ganapathi, R. & Ganapathi, M. K. (2009). Casein Kinase Iδ/ε Phosphorylates serine 1106 in Topoisomerase IIα and Regulates Cleavable Complex Formation. Nucleic Acids Research, 37, 382-92.

Yano, K., Shibata, S., Chen, W.-L., Sato, S., Kaneko, T., Jurkiewicz, A., Sandal, N., Banba, M., Imaizumi-Anraku, H., Kojima, T., Ohtomo, R., Szczyglowski, K., Stougaard, J., Tabata, S., Hayashi, M., Kouchi, H. & Umehara, Y. (2009). CERBERUS, a novel U-box protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobium symbiosis. Plant Journal, 60(1), 168-180. https://doi.org/10.1111/j.1365-313X.2009.03943.x

Henriksen, C., Madsen, L. B., Bendixen, C. & Larsen, K. (2009). Characterization of the porcine TOR1A gene: The first step towards generation of a pig model for dystonia. Gene, 430, 105-115. https://doi.org/10.1016/j.gene.2008.10.023

Maddukuri, L., Speina, E., Christiansen, M., Dudzinska, D., Zaim, J., Obtułowicz, T., Kabaczyk, S., Komisarski, M., Bukowy, Z., Szczegielniak, J., Wójcik, A., Kuśmierek, J. T., Stevnsner, T. V., Bohr, V. & Tudek, B. (2009). Cockayne syndrome group B protein is engaged in processing of DNA adducts of lipid peroxidation product trans-4-hydroxy-2-nonenal. Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 666(1-2), 23-31. https://doi.org/10.1016/j.mrfmmm.2009.03.007

Schack, L., Lange, A., Kelsen, J., Agnholt, J., Christensen, B., Petersen, T. E. & Sørensen, E. S. (2009). Considerable variation in the concentration of osteopontin in human milk, bovine milk and infant formulas. Journal of Dairy Science, 92(11), 5378-85.

Grohe, B., Taller, A., Vincent, P. L., Tieu, L. D., Rogers, K. A., Heiss, A., Sørensen, E. S., Mittler, S., Goldberg, H. A. & Hunter, G. (2009). Crystallization of Calcium Oxalates Is Controlled by Molecular Hydrophilicity and Specific Polyanion-Crystal Interactions. Langmuir, 25(19), 11635-11646.

Bøggild, A., Overgaard, M., Valentin-Hansen, P. & Brodersen, D. E. (2009). Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA binding properties. FEBS journal, 276, 4328-39. https://doi.org/10.1111/j.1742-4658.2009.07104.x

Falconi, M., Oteri, F., Chillemi, G., Andersen, F. F., Tordrup, D. P., Oliveira, C. L. P. D., Pedersen, J. S., Knudsen, B. R. & Desideri, A. (2009). Deciphering the Structural Properties That Confer Stability to a DNA Nanocage. A C S Nano, 3(7).

Fulton, L., Batoux, M., Vaddepalli, P., Yadav, R. K., Busch, W., Andersen, S. U., Jeong, S., Lohmann, J. U. & Schneitz, K. (2009). DETORQUEO, QUIRKY, and ZERZAUST represent novel components involved in organ development mediated by the receptor-like kinase STRUBBELIG in Arabidopsis thaliana. PLoS Genetics, 5(1), e1000355. https://doi.org/10.1371/journal.pgen.1000355

Sejersen, H. & Rattan, S. (2009). Dicarbonyl-induced accelerated aging in human skin fibroblasts. Biogerontology, 10, 203-211.

Melchjorsen, J., Kristiansen, H., Christiansen, R., Rintahaka, J., Matikainen, S., Paludan, S. R. & Hartmann, R. (2009). Differential Regulation of the OASL and OAS1 Genes in Response to Viral Infections. Journal of Interferon & Cytokine Research. https://doi.org/10.1089/jir.2008.0050

Mistry, A., Glud, S. Z., Kjems, J., Nyengaard, J. R., Howard, K. A., Stolnik, S. & Illum, L. (2009). Effect of physicochemical properties on intranasal nanoparticle transit into murine olfactory epithelium. Journal of Drug Evaluation, 17(7), 543-552. https://doi.org/10.1080/10611860903055470

Molle, D., Segura-Morales, C., Camus, G., Berlloz-Forrent, C., Kjems, J., Basyuk, E. & Bertrand, E. (2009). Endosomal Trafficking of HIV-1 Gag and Genomic RNAs Regulates Viral Egress. Journal of Biological Chemistry, 284(29), 19727-19743. https://doi.org/10.1074/jbc.M109.019844

Boggs, N. A., Dwyer, K. G., Shah, P., McCulloch, A. A., Bechsgaard, J., Schierup, M. H., Nasrallah, M. E. & Nasrallah, J. B. (2009). Expression of distinct self-incompatibility specificities in Arabidopsis thaliana. Genetics, 182(4), 1313-21. https://doi.org/10.1534/genetics.109.102442

Steinhausen, H.-C., Foldager, L., Perto, G. & Munk-Jørgensen, P. (2009). Family aggregation of mental disorders in the nationwide Danish three generation study. European Archives of Psychiatry and Clinical Neuroscience, 259(5), 270-277. https://doi.org/10.1007/s00406-008-0865-0

Rattan, S. & Singh, R. (2009). Gene therapy in aging. Gene Therapy (Basingstoke), 16, 3-9.

Höglund, J. K., Guldbrandtsen, B., Su, G., Thomsen, B. & Lund, M. S. (2009). Genome Scan Detects Quantitative Trait Loci Affecting Female Fertility Traits in Danish and Swedish Holstein Cattle. Journal of Dairy Science, (92), 2136-2143. https://doi.org/10.3168/jds.2008-1104

Andersen, L. D., Ostenfeld, M. S., Bramsen, J. B., Silahtaroglu, A., Lamy, P., Ramanathan, R., Fristrup, N., Jensen, J. L., Andersen, C. L., Zieger, K., Kauppinen, S., Ulhøi, B. P., Kjems, J., Borre, M. & Ørntoft, T. F. (2009). Genomic profiling of microRNAs in bladder cancer: miR-129 is associated with poor outcome and promotes cell death in vitro. Cancer Research, 69(11), 4851-60. https://doi.org/10.1158/0008-5472.CAN-08-4043

Schierup, M. H., Mailund, T., Li, H., Wang, J., Tjønneland, A., Vogel, U., Bolund, L. & Nexø, B. A. (2009). Haplotype frequencies in a sub-region of chromosome 19q13.3, related to risk and prognosis of cancer, differ dramatically between ethnic groups. BMC Medical Genetics, 10, 20. https://doi.org/10.1186/1471-2350-10-20

Rattan, S., Fernandes, R., Demirovic, D., Dymek, B. & Lima, C. F. (2009). Heat stress and hormetin-induced hormesis in human cells: effects on aging, wound healing, angiogenesis and differentiation. Dose-Response, 7, 90-103.

Hollegaard, M. V., Grove, J., Thorsen, P., Nørgaard-Pedersen, B. & Hougaard, D. M. (2009). High-throughput genotyping on archived dried blood spot samples. Genetic Testing and Molecular Biomarkers, 13(2), 173-9. https://doi.org/10.1089/gtmb.2008.0073

Andersen, K. & Otzen, D. (2009). How chain length and charge affect surfactant denaturation of ACBP. Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical, 113, 13942-13952.

Dellgren, C., Gad, H. H., Hamming, O. J., Melchjorsen, J. & Hartmann, R. (2009). Human interferon-lambda3 is a potent member of the type III interferon family. Genes and Immunity, 87(10). https://doi.org/10.1038/gene.2008.87

Markert, L. DA., Lovmand, J., Foss, M., Lauridsen, R. H., Lovmand, M., Füchtbauer, E.-M., Füchtbauer, A., Wertz, K., Besenbacher, F., Pedersen, F. S. & Duch, M. (2009). Identification of distinct topographical surface microstructures favoring either undifferentiated expansion or differentiation of murine embryonic stem cells. Stem Cells and Development, 18(9), 1331-42. https://doi.org/10.1089/scd.2009.0114

Jørgensen, F. G. & Schierup, M. H. (2009). Increased rate of human mutations where DNA and RNA polymerases collide. Trends in Genetics, 25(12), 523-527. https://doi.org/10.1016/j.tig.2009.10.002

Nielsen, J., Foldager, L. & Meyer, J. M. (2009). Increased use of antibiotics in patients treated with clozapine. European Neuropsychopharmacology, 19(7), 483-486.

Li, Y., Dong, M., Otzen, D., Yao, Y., Liu, B., Besenbacher, F. & Mamdouh, W. (2009). Influence of tunable external stimuli on the self-assembly of guanosine supramolecular nanostructures studied by atomic force microscope. Langmuir, 25.

Halaban, R., Krauthammer, M., Pelizzola, M., Cheng, E., Kovacs, D., Sznol, M., Ariyan, S., Narayan, D., Bacchiocchi, A., Molinaro, A., Kluger, Y., Deng, M., Tran, N., Zhang, W., Picardo, M. & Enghild, J. J. (2009). Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications. PLoS One, 4(2), e4563. https://doi.org/10.1371/journal.pone.0004563

Sehgal, P., Kosaka, O., Doe, H. & Otzen, D. (2009). Interaction and stability of mixed micelle and monolayer of nonionic and cationic surfactant mixtures. Journal of Dispersion Science and Technology, 30, 1050-1058.

Rantalainen, K., Christensen, P. A., Hafrén, A., Otzen, D., Kalkkinen, N. & Mäkinen, K. (2009). Interaction of a potyviral VPg with anionic phospholipid vesicles. Virology, 395, 114-120.

Sehgal, P., Mizuki, T., Doe, H., Wimmer, R., Larsen, K. L. & Otzen, D. (2009). Interactions and Influence of a-Cyclodextrin on the Aggregation and Interfacial Properties of Mixtures of Nonionic and Zwitterionic Surfactants. Colloid and Polymer Science, 287, 1243-1252.

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Lisbeth Heilesen