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Latest peer-reviewed publications at MBG

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Displaying results 3101 to 62 out of 62

Peer-reviewed publications at MBG - all years

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Ntini, E., Järvelin, A. I., Bornholdt, J., Chen, Y., Boyd, M., Jørgensen, M., Andersson, R., Hoof, I., Schein, A., Andersen, P. R., Andersen, P. K., Preker, P., Valen, E., Zhao, X., Pelechano, V., Steinmetz, L. M., Sandelin, A. G. & Jensen, T. H. (2013). Polyadenylation site-induced decay of upstream transcripts enforces promoter directionality. Nature Structural and Molecular Biology, 20(8), 923-928. https://doi.org/10.1038/nsmb.2640

Iešmantavičius, V., Jensen, M. R., Ozenne, V., Blackledge, M., Poulsen, F. M. & Kjærgaard, M. (2013). Modulation of the intrinsic helix propensity of an intrinsically disordered protein reveals long-range helix-helix interactions. Journal of the American Chemical Society, 135(27), 10155-63. https://doi.org/10.1021/ja4045532

Hansen, L., Unmack Larsen, E. K., Nielsen, E. H., Iversen, F., Liu, Z., Thomsen, K., Pedersen, M., Skrydstrup, T., Nielsen, N. C., Ploug, M. & Kjems, J. (2013). Targeting of peptide conjugated magnetic nanoparticles to urokinase plasminogen activator receptor (uPAR) expressing cells. Nanoscale, 5, 8192-8201. https://doi.org/10.1039/c3nr32922d

Dam, S. S., Thaysen-Andersen, M., Stenkjær, E., Lorentzen, A. M., Roepstorff, P., Packer, N. H. & Stougaard, J. (2013). Combined N-glycome and N-glycoproteome analysis of the Lotus japonicus seed globulin fraction shows conservation of protein structure and glycosylation in legumes. Journal of Proteome Research, 12(7), 3383-3392. https://doi.org/10.1021/pr400224s

Waight, A. B., Pedersen, B. P., Schlessinger, A., Bonomi, M., Chau, B. H., Roe-Zurz, Z., Risenmay, A. J., Sali, A. & Stroud, R. M. (2013). Structural basis for alternating access of a eukaryotic calcium/proton exchanger. Nature, 499(7456), 107-110. https://doi.org/10.1038/nature12233

Arnò, B., D'Annessa, I., Tesauro, C., Zuccaro, L., Ottaviani, A., Knudsen, B. R., Fiorani, P. & Desideri, A. (2013). Replacement of the human topoisomerase linker domain with the plasmodial counterpart renders the enzyme camptothecin resistant. PLoS One, 8(7), Article e68404. https://doi.org/10.1371/journal.pone.0068404

Brodersen, D. E., Andersen, G. R. & Andersen, C. B. F. (2013). Mimer: an automated spreadsheet-based crystallization screening system. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications Online, 69(Pt 7), 815-820. https://doi.org/10.1107/S1744309113014425

Kehan, X., Dedic, E., Cob-Cantal, P., Dienemann, C., Bøggild, A., Winther, K. S., Gerdes, K. & Brodersen, D. E. (2013). Protein expression, crystallization and preliminary X-ray crystallographic analysis of the isolated Shigella flexneri VapC toxin. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications Online, 69(Pt 7), 762-765. https://doi.org/10.1107/S1744309113014012

Pham, L. D., Do, D. N., Binh, N. T., Nam, L. Q., Van Ba, N., Thuy, T. T. T., Hoan, T. X., Cuong, V. C. & Kadarmideen, H. N. (2013). Assessment of genetic diversity and population structure of Vietnamese indigenous cattle populations by microsatellites. Livestock Science, 155(1), 17-22. https://doi.org/10.1016/j.livsci.2013.04.006

Garm, C., Moreno-Villanueva, M., Bürkle, A., Larsen, L. A., Bohr, V. A., Christensen, K. & Stevnsner, T. V. (2013). Genetic and environmental influence on DNA strand break repair: a twin study. Environmental and Molecular Mutagenesis, 54(6), 414-420. https://doi.org/10.1002/em.21791

Vader, P., Fens, M. HAM., Sachini, N., van Oirschot, B. A., Andringa, G., Egberts, A. CG., Gaillard, C. AJM., Rasmussen, J. T., van Wijk, R., van Solinge, W. W. & Schiffelers, R. M. (2013). Taxol®-induced phosphatidylserine exposure and microvesicle formation in red blood cells is mediated by its vehicle Cremophor® EL. Nanomedicine, 8(7), 1127-1135. https://doi.org/10.2217/NNM.12.163

Kisiswa, L., Osório, C., Erice, C., Vizard, T., Wyatt, S. & Davies, A. M. (2013). TNF_α reverse signaling promotes sympathetic axon growth and target innervation. Nature Neuroscience, 16(7), 865-873. https://doi.org/10.1038/nn.3430

Kristensen, H.-U. S., Epanchintsev, A., Rauschendorf, M.-A., Laugel, V., Stevnsner, T., Bohr, V. A., Coin, F. & Egly, J.-M. (2013). Regulatory interplay of Cockayne syndrome B ATPase and stress-response gene ATF3 following genotoxic stress. Proceedings of the National Academy of Sciences (PNAS), 110(25), 2261-2270. https://doi.org/10.1073/pnas.1220071110

Nielsen, T. O., Sorensen, S., Dagnæs-Hansen, F., Kjems, J. & Sørensen, B. S. (2013). Directing HER4 mRNA expression towards the CYT2 isoform by antisense oligonucleotide decreases growth of breast cancer cells in vitro and in vivo. B J C, 108(11), 2291-2298. https://doi.org/10.1038/bjc.2013.247

Lubas, M. S., Damgaard, C. K., Tomecki, R., Cysewski, D., Jensen, T. H. & Dziembowski, A. (2013). Exonuclease hDIS3L2 specifies an exosome-independent 3'-5' degradation pathway of human cytoplasmic mRNA. EMBO Journal, 32(13), 1855-1568. https://doi.org/10.1038/emboj.2013.135

Semba, R. D., Enghild, J. J., Venkatraman, V., Dyrlund, T. F. & Van Eyk, J. E. (2013). The Human Eye Proteome Project: Perspectives on an emerging proteome. Proteomics, 13(16), 2500–2511. https://doi.org/10.1002/pmic.201300075

Hou, L., Kongsted, A. H., Ghoreishi, S. M., Takhtsabzy, T. K., Friedrichsen, M., Hellgren, L. I., Kadarmideen, H. N., Vaag, A. & Nielsen, M. O. (2013). Pre- and Early-Postnatal Nutrition Modify Gene and Protein Expressions of Muscle Energy Metabolism Markers and Phospholipid Fatty Acid Composition in a Muscle Type Specific Manner in Sheep. PLoS One, 8(6), Article e65452. https://doi.org/10.1371/journal.pone.0065452

Buttenschøn, H. N., Flint, T. J., Foldager, L., Qin, P., Christoffersen, S., Hansen, N. F., Kristensen, I. B., Mortensen, P. B., Børglum, A. D. & Mors, O. (2013). An association study of suicide and candidate genes in the serotonergic system. Journal of Affective Disorders, 148(2-3), 291-8. https://doi.org/10.1016/j.jad.2012.12.011

Dueholm, M. S., Søndergaard, M., Nilsson, M., Christiansen, G., Stensballe, A., Overgaard, M. T., Givskov, M. C., Tolker-Nielsen, T., Otzen, D. & Nielsen, P. H. (2013). Expression of Fap amyloids in Pseudomonas aeruginosa, P. fluorescens, and P. putida results in aggregation and increased biofilm formation. MicrobiologyOpen, 2(3), 365-382. https://doi.org/10.1002/mbo3.81

Strathe, A. B., Velander, I. H., Mark, T. & Kadarmideen, H. N. (2013). Genetic parameters for androstenone and skatole as indicators of boar taint and their relationship to production and litter size traits in Danish Landrace. Journal of Animal Science, 91(6), 2587-2595. https://doi.org/10.2527/jas.2012-6107

Chlebowski, A., Lubas, M. S., Jensen, T. H. & Dziembowski, A. (2013). RNA decay machines: the exosome. BBA Gene Regulatory Mechanisms, 1829(6-7), 552-560. https://doi.org/10.1016/j.bbagrm.2013.01.006

Nairismägi, M.-L., Füchtbauer, A., Labouriau, R., Bramsen, J. B. & Füchtbauer, E.-M. (2013). The Proto-Oncogene TWIST1 Is Regulated by MicroRNAs. PLoS One, 8(5), e66070. https://doi.org/10.1371/journal.pone.0066070

Cohen, S. I. A., Linse, S., Luheshi, L. M., Hellstrand, E., White, D. A., Rajah, L., Otzen, D., Vendruscolo, M., Dobson, C. M. & Knowles, T. P. J. (2013). Proliferation of amyloid-β42 aggregates occurs through a secondary nucleation mechanism. Proceedings of the National Academy of Sciences (PNAS), 110(24), 9758-9763. https://doi.org/10.1073/pnas.1218402110

Arnò, B., Coletta, A., Tesauro, C., Zuccaro, L., Fiorani, P., Lentini, S., Galloni, P., Conte, V., Floris, B. & Desideri, A. (2013). A small organic compound enhances the religation reaction of human topoisomerase I and identifies crucial elements for the religation mechanism. Bioscience Reports, 33(2), 269-279. Article e00025. https://doi.org/10.1042/BSR20120118

Ge, X., Lu, Y., Leung, T.-M., Sørensen, E. S. & Nieto, N. (2013). Milk osteopontin, a nutritional approach to prevent alcohol-induced liver injury. American Journal of Physiology: Gastrointestinal and Liver Physiology, 304(10), G929-G939. https://doi.org/10.1152/ajpgi.00014.2013

Jonstrup, A. T., Fredsøe, J. C. & Andersen, A. H. (2013). DNA hairpins as temperature switches, thermometers and ionic detectors. Sensors, 13(5), 5937-5944. https://doi.org/10.3390/s130505937

Lassen, L. B., Füchtbauer, A., Schmitz, A., Sørensen, A. B., Pedersen, F. S. & Füchtbauer, E.-M. (2013). Septin9 is involved in T-cell development and CD8(+) T-cell homeostasis. Cell and Tissue Research, 352(3), 695-705. https://doi.org/10.1007/s00441-013-1618-6

Pigolotti, S., Lizana, L., Otzen, D. & Sneppen, K. (2013). Quality control system response to stochastic growth of amyloid fibrils. FEBS Letters, 587(9), 1405-1410. https://doi.org/10.1016/j.febslet.2013.03.018

Boesen, T. & Nielsen, L. P. (2013). Molecular dissection of bacterial nanowires. mBio (Online), 4(3), e00270-13. https://doi.org/10.1128/mBio.00270-13

Hossfeld, S., Nolte, A., Hartmann, H., Recke, M., Schaller, M., Walker, T., Kjems, J., Schlosshauer, B., Stoll, D., Wendel, H.-P. & Krastev, R. (2013). Bioactive coronary stent coating based on layer-by-layer technology for siRNA release. Acta Biomaterialia, 9(5), 6741-6752. https://doi.org/10.1016/j.actbio.2013.01.013

Aamann, M. D., Muftuoglu, M., Bohr, V. A. & Stevnsner, T. (2013). Multiple interaction partners for Cockayne syndrome proteins: Implications for genome and transcriptome maintenance. Mechanisms of Ageing and Development, 134(5-6), 212-224. https://doi.org/10.1016/j.mad.2013.03.009

Knudsen, B. R., Jepsen, M. L. & Ho, Y.-P. (2013). Quantum dot-based nanosensors for diagnosis via enzyme activity measurement. Expert Review of Molecular Diagnostics, 13(4), 367-375. https://doi.org/10.1586/erm.13.17

Pedersen, B. P., Kumar, H., Waight, A. B., Risenmay, A. J., Roe-Zurz, Z., Chau, B. H., Schlessinger, A., Bonomi, M., Harries, W., Sali, A., Johri, A. K. & Stroud, R. M. (2013). Crystal structure of a eukaryotic phosphate transporter. Nature, 496(7446), 533-536. https://doi.org/10.1038/nature12042

Marco-Ramell, A., Bassols, A., Bislev, S. L., Sanggaard, K. W., Enghild, J. J., Bendixen, E. & Fraile, L. (2013). Targeted proteomics as a tool for porcine acute phase proteins measurements. In A. D. Almeida , D. Eckersall , E. Bencurova , S. Dolinska, P. Mlynarcik , M. Vincova & M. Bhide (Eds.), Proceedings of the 4th Management Committee Meeting and 3rd Meeting of Working Groups 1, 2 & 3 of COST Action FA1002 (pp. 217-220). Wageningen Academic Publishers. https://doi.org/10.3920/978-90-8686-776-9_55

Runager, K., Klintworth, G. K., Karring, H. & Enghild, J. J. (2013). The insoluble TGFBIp fraction of the cornea is covalently linked via a disulfide bond to type XII collagen. Biochemistry, 52(16), 2821-2827. https://doi.org/10.1021/bi400212m

Karring, H., Poulsen, E. T., Runager, K., Thøgersen, I. B., Klintworth, G. K., Højrup, P. & Enghild, J. J. (2013). Serine protease HtrA1 accumulates in corneal transforming growth factor beta induced protein (TGFBIp) amyloid deposits. Molecular Vision, 19, 861-876. http://www.ncbi.nlm.nih.gov/pubmed/23592924

Wu, K., Song, W., Zhao, L., Liu, M., Yan, J., Andersen, M. Ø., Kjems, J., Gao, S. & Zhang, Y. (2013). MicroRNA functionalized microporous titanium oxide surface by lyophilization with enhanced osteogenic activity. A C S Applied Materials and Interfaces, 5(7), 2733-44. https://doi.org/10.1021/am400374c

Nordentoft, I. K., Lamy, P., Birkenkamp-Demtröder, K., Vang, S., Reinert, T., Hedegaard, J., Thorsen, K., Fristrup, N., Borre, M., Andersen, L. D., Pedersen, J. S. & Ørntoft, T. F. (2013). Whole genome and transcriptome analysis reveals novel genomic alterations in bladder cancer. Poster session presented at American Association for Cancer Research, Washington, DC, United States.

Balakrishnan, V. S., Vad, B. S. & Otzen, D. (2013). Novicidin's membrane permeabilizing activity is driven by membrane partitioning but not by helicity: A biophysical study of the impact of lipid charge and cholesterol. BBA General Subjects, 1834(6), 996-1002. https://doi.org/10.1016/j.bbapap.2013.03.025

Larsen, B. R., Steffensen, S. D., Nielsen, N. V. L., Friis, S., Godiksen, S., Bornholdt, J., Soendergaard, C., Nonboe, A. W., Andersen, M. N., Poulsen, S. S., Szabo, R., Bugge, T. H., Lin, C.-Y., Skovbjerg, H., Jensen, J. K. & Vogel, L. K. (2013). Hepatocyte growth factor inhibitor-2 prevents shedding of matritpase. Experimental Cell Research, 319(6), 918-929. https://doi.org/10.1016/j.yexcr.2013.01.008

Dang, J., Bian, Y., Sun, J., Chen, F., Dong, G.-Y., Liu, Q., Wang, X.-W., Kjems, J., Gao, S. & Wang, Q.-T. (2013). MicroRNA-137 promoter methylation in oral lichen planus and oral squamous cell carcinoma. Journal of Oral Pathology & Medicine, 42(4), 315-321. https://doi.org/10.1111/jop.12012

Kjær-Sørensen, K., Engholm, D. H., Kamei, H., Mørch, M. G. M., Kristensen, A. O., Zhou, J., Conover, C. A., Duan, C. & Oxvig, C. (2013). Pregnancy-associated plasma protein-A (PAPP-A) modulates early developmental rate in zebrafish independent of its proteolytic activity. Journal of Biological Chemistry, 288, 9982-9992. https://doi.org/10.1074/jbc.M112.426304

Brinkmann, C. R., Thiel, S. & Otzen, D. (2013). Protein:fatty acid complexes: Biochemistry, biophysics and function. FEBS journal, 280(8), 1733–1749. https://doi.org/10.1111/febs.12204

Beerens, N., Jepsen, M. D. E., Nechyporuk-Zloy, V., Krüger, A. C., Darlix, J.-L., Kjems, J. & Birkedal, V. (2013). Role of the primer activation signal in tRNA annealing onto the HIV-1 genome studied by single-molecule FRET microscopy. RNA, 19(4), 517-26. https://doi.org/10.1261/rna.035733.112

Doganli, C., Beck, H. C., Ribera, A. B., Oxvig, C. & Lykke-Hartmann, K. (2013). α3Na+/K+-ATPase deficiency causes brain ventricle dilation and abrupt embryonic motility in zebrafish. Journal of Biological Chemistry, 288, 8862-8874. https://doi.org/10.1074/jbc.M112.421529

Marcussen, L. B., Jepsen, M. L., Kristoffersen, E. L., Franch, O., Proszek, J., Ho, Y.-P., Stougaard, M. & Knudsen, B. R. (2013). DNA-Based Sensor for Real-Time Measurement of the Enzymatic Activity of Human Topoisomerase I. Sensors, 13(4), 4017-4028. https://doi.org/10.3390/s130404017