Peer-reviewed articles

Publications from the department

Journal covers made by researchers from our department

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Rivas-González, I., Schierup, M. H., Wakeley, J. & Hobolth, A. (2024). Trails: Tree reconstruction of ancestry using incomplete lineage sorting. PLOS Genetics, 20(2), Article e1010836. https://doi.org/10.1371/journal.pgen.1010836

Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Kaiser, M., Thodberg, K. & Herskin, M. S. (2024). Validation of behavioural sampling techniques for 20-25 kg pigs during transport. Livestock Science, 280, Article 105411. https://doi.org/10.1016/j.livsci.2024.105411

Erxleben, D. A., Dodd, R. J., Day, A. J., Green, D. E., DeAngelis, P. L., Poddar, S., Enghild, J. J., Huebner, J. L., Kraus, V. B., Watkins, A. R., Reesink, H. L., Rahbar, E. & Hall, A. R. (2024). Targeted Analysis of the Size Distribution of Heavy Chain-Modified Hyaluronan with Solid-State Nanopores. Analytical Chemistry, 96(4), 1606-1613. https://doi.org/10.1021/acs.analchem.3c04387

Fedosov, S., Nexø, E. & Würtz Heegaard, C. (2024). Kinetics of Cellular Cobalamin Uptake and Conversion: Comparison of Aquo/Hydroxocobalamin to Cyanocobalamin. Nutrients, 16(3), Article 378. https://doi.org/10.3390/nu16030378

Thomsen, M. M., Skouboe, M. K., Møhlenberg, M., Zhao, J., de Keukeleere, K., Heinz, J. L., Werner, M., Hollensen, A. K., Lønskov, J., Nielsen, I., Carter-Timofte, M. E., Zhang, B., Mikkelsen, J. G., Fisker, N., Paludan, S. R., Assing, K. & Mogensen, T. H. (2024). Impaired STING Activation Due to a Variant in the E3 Ubiquitin Ligase AMFR in a Patient with Severe VZV Infection and Hemophagocytic Lymphohistiocytosis. Journal of Clinical Immunology, 44(2), Article 56. https://doi.org/10.1007/s10875-024-01653-5

Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A. ... Farh, K. K. H. (2024). Identification of constrained sequence elements across 239 primate genomes. Nature, 625(7996), 735-742. https://doi.org/10.1038/s41586-023-06798-8

Kofod Petersen, A., Villesen, P. & Staun Larsen, L. (2024). Keypoint detection and representation for automated comparison of intraoral 3D photoscans. Abstract from PhD dag.

Monti, M., Milanetti, E., Frans, M. T., Miotto, M., Di Rienzo, L., Baranov, M. V., Gosti, G., Somavarapu, A. K., Nagaraj, M., Golbek, T. W., Rossing, E., Moons, S. J., Boltje, T. J., van den Bogaart, G., Weidner, T., Otzen, D. E., Tartaglia, G. G., Ruocco, G. & Roeters, S. J. (2024). Two Receptor Binding Strategy of SARS-CoV-2 Is Mediated by Both the N-Terminal and Receptor-Binding Spike Domain. The journal of physical chemistry. B, 128(2), 451-464. https://doi.org/10.1021/acs.jpcb.3c06258

McRae, E. K. S., Wan, C. J. K., Kristoffersen, E. L., Hansen, K., Gianni, E., Gallego, I., Curran, J. F., Attwater, J., Holliger, P. & Andersen, E. S. (2024). Cryo-EM structure and functional landscape of an RNA polymerase ribozyme. Proceedings of the National Academy of Sciences (PNAS), 121(3), e2313332121. Article e2313332121. https://doi.org/10.1073/pnas.2313332121

García-Soto, I., Andersen, S. U., Monroy-Morales, E., Robledo-Gamboa, M., Guadarrama, J., Aviles-Baltazar, N. Y., Serrano, M., Stougaard, J. & Montiel, J. (2024). A collection of novel Lotus japonicus LORE1 mutants perturbed in the nodulation program induced by the Agrobacterium pusense strain IRBG74. Frontiers in Plant Science, 14, Article 1326766. https://doi.org/10.3389/fpls.2023.1326766

Taleski, M., Jin, M., Chapman, K., Taylor, K., Winning, C., Frank, M., Imin, N. & Djordjevic, M. A. (2024). CEP hormones at the nexus of nutrient acquisition and allocation, root development, and plant-microbe interactions. Journal of Experimental Botany, 75(2), 538-552. https://doi.org/10.1093/jxb/erad444

Chapman, K., Taleski, M., Frank, M. & Djordjevic, M. A. (2024). C-TERMINALLY ENCODED PEPTIDE (CEP) and cytokinin hormone signaling intersect to promote shallow lateral root angles. Journal of Experimental Botany, 75(2), 631-641. https://doi.org/10.1093/jxb/erad353

Sprenger, R. R., Ostenfeld, M. S., Bjørnshave, A., Rasmussen, J. T. & Ejsing, C. S. (2024). Lipidomic Characterization of Whey Concentrates Rich in Milk Fat Globule Membranes and Extracellular Vesicles. Biomolecules, 14(1), Article 55. https://doi.org/10.3390/biom14010055

Pečnerová, P., Lord, E., Garcia-Erill, G., Hanghøj, K., Rasmussen, M. S., Meisner, J., Liu, X., van der Valk, T., Santander, C. G., Quinn, L., Lin, L., Liu, S., Carøe, C., Dalerum, F., Götherström, A., Måsviken, J., Vartanyan, S., Raundrup, K., Al-Chaer, A. ... Siegismund, H. R. (2024). Population genomics of the muskox' resilience in the near absence of genetic variation. Molecular Ecology, 33(2), Article e17205. https://doi.org/10.1111/mec.17205

Nimptsch, K., Aydin, E. E., Chavarria, R. F. R., Janke, J., Poy, M. N., Oxvig, C., Steinbrecher, A. & Pischon, T. (2024). Pregnancy associated plasma protein-A2 (PAPP-A2) and stanniocalcin-2 (STC2) but not PAPP-A are associated with circulating total IGF-1 in a human adult population. Scientific Reports, 14(1), Article 1770. https://doi.org/10.1038/s41598-024-52074-8, https://doi.org/10.1038/s41598-024-52074-8

Ma, Y., Yu, Z. & Valero, J. (2024). Recent Advances on Catenanes and Rotaxanes Made of DNA. In E. M. Pérez (Ed.), Mechanically Interlocked Materials: Polymers, Nanomaterials, MOFs, and more (pp. 195-216). Wiley.

Dubiez, E., Pellegrini, E., Finderup Brask, M., Garland, W., Foucher, A. E., Huard, K., Heick Jensen, T., Cusack, S. & Kadlec, J. (2024). Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex. Cell Reports, 43(1), Article 113639. https://doi.org/10.1016/j.celrep.2023.113639

Di Cesare, M., Kaplan, E., Rendon, J., Gerbaud, G., Valimehr, S., Gobet, A., Ngo, T.-A. T., Chaptal, V., Falson, P., Martinho, M., Dorlet, P., Hanssen, E., Jault, J.-M. & Orelle, C. (2024). The transport activity of the multidrug ABC transporter BmrA does not require a wide separation of the nucleotide-binding domains. The Journal of Biological Chemistry, 300(1), 105546. Article 105546. https://doi.org/10.1016/j.jbc.2023.105546

Fleming, S. A., Reyes, S. M., Donovan, S. M., Hernell, O., Jiang, R., Lönnerdal, B., Neu, J., Steinman, L., Sørensen, E. S., West, C. E., Kleinman, R. & Wallingford, J. C. (2024). An expert panel on the adequacy of safety data and physiological roles of dietary bovine osteopontin in infancy. Frontiers in nutrition, 11, Article 1404303. https://doi.org/10.3389/fnut.2024.1404303

Kaur, G. & Rattan, S. (Eds.) (2024). Brain and Mental Health in Ageing. Springer, Cham. Healthy Ageing and Longevity Vol. 21 https://doi.org/10.1007/978-3-031-68513-2

Andersen, D. G., Pedersen, A. B., Jørgensen, M. H., Montasell, M. C., Søgaard, A. B., Chen, G., Schroeder, A., Andersen, G. R. & Zelikin, A. N. (2024). Chemical Zymogens and Transmembrane Activation of Transcription in Synthetic Cells. Advanced Materials, 36(6), Article 2309385. https://doi.org/10.1002/adma.202309385

Okholm, T. L. H., Kamstrup, A. B., Nielsen, M. M., Hollensen, A. K., Graversgaard, M. L., Sørensen, M. H., Kristensen, L. S., Vang, S., Park, S. S., Yeo, E., Dyrskjøt, L., Kjems, J., Pedersen, J. S. & Damgaard, C. K. (2024). circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA. eLife, 13, Article RP91783. https://doi.org/10.7554/eLife.91783

Gobet, A., Moissonnier, L. & Chaptal, V. (2024). CryoEM Data Analysis of Membrane Proteins. Practical Considerations on Amphipathic Belts, Ligands, and Variability Analysis. In Bacterial Secretion Systems (Vol. 2715, pp. 471-483). Humana Press. https://doi.org/10.1007/978-1-0716-3445-5_28

Kaur, G. & Rattan, S. (2024). Defining, Re-defining, and Understanding the Brain and Mental Health During Ageing. In G. Kaur & S. I. S. Rattan (Eds.), Brain and Mental Health in Ageing (pp. 3-16). Springer, Cham. https://doi.org/10.1007/978-3-031-68513-2_1

Rusbjerg-Weberskov, C. E., Gant, M. S., Chamot-Rooke, J., Nielsen, N. S. & Enghild, J. J. (2024). Development of a top-down MS assay for specific identification of human periostin isoforms. Frontiers in Molecular Biosciences, 11, Article 1399225. https://doi.org/10.3389/fmolb.2024.1399225

Harwood, S. L. & Enghild, J. J. (2024). Engineering New Protease Inhibitors Using α₂-Macroglobulin. In S. Santamaria (Ed.), Proteases and Cancer: Methods and Protocols (pp. 279-294). Humana Press. https://doi.org/10.1007/978-1-0716-3589-6_21

Nowak, J. S. & Otzen, D. E. (2024). Helping proteins come in from the cold: 5 burning questions about cold-active enzymes. BBA advances, 5, Article 100104. https://doi.org/10.1016/j.bbadva.2023.100104

Rattan, S., Bartke, A., Rose, M. R., Lim, L. W., Caruso, C., Ulfhake, B. & Olovnikov, A. (2024). Holistic approaches to healthy longevity. In A. Trukhanov & M. Chan (Eds.), Handbook on Longevity Medicine: The Road Map (pp. 247-286). European Wellness Academy. https://doi.org/10.69669/wn5724

Peña-Díaz, S., Ferreira, P., Ramos, M. J. & Otzen, D. E. (2024). Mining and engineering activity in catalytic amyloids. Methods in Enzymology, 697, 345-422. https://doi.org/10.1016/bs.mie.2024.03.002

Bofill-De Ros, X. & Vang Ørom, U. A. (2024). Recent progress in miRNA biogenesis and decay. RNA Biology, 21(1), 1-8. https://doi.org/10.1080/15476286.2023.2288741

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Lisbeth Heilesen