Pedersen, C. N., Yang, F., Ita, S., Xu, Y., Akunuri, R.
, Trampari, S., Neumann, C. M. T., Desdorf, L. M., Schiøtt, B., Salvino, J. M., Mortensen, O. V.
, Nissen, P. & Shahsavar, A. (2024).
Cryo-EM structure of the dopamine transporter with a novel atypical non-competitive inhibitor bound to the orthosteric site.
Journal of Neurochemistry,
168(9), 2043-2055.
https://doi.org/10.1111/jnc.16179
Pečnerová, P., Lord, E.
, Garcia-Erill, G., Hanghøj, K., Rasmussen, M. S., Meisner, J., Liu, X., van der Valk, T., Santander, C. G., Quinn, L., Lin, L., Liu, S., Carøe, C., Dalerum, F., Götherström, A., Måsviken, J., Vartanyan, S., Raundrup, K., Al-Chaer, A. ... Siegismund, H. R. (2024).
Population genomics of the muskox' resilience in the near absence of genetic variation.
Molecular Ecology,
33(2), Article e17205.
https://doi.org/10.1111/mec.17205
Papini, N. M., Presseller, E., Bulik, C. M.
, Holde, K., Larsen, J. T., Thornton, L. M.
, Albiñana, C., Vilhjálmsson, B. J., Mortensen, P. B., Yilmaz, Z. & Petersen, L. V. (2024).
Interplay of polygenic liability with birth-related, somatic, and psychosocial factors in anorexia nervosa risk: a nationwide study.
Psychological Medicine,
54(9), 2073-2086.
https://doi.org/10.1017/S0033291724000175
Palviainen, M., Puutio, J.
, Østergaard, R. H., Eble, J. A., Maaninka, K., Butt, U., Ndika, J., Kari, O. K., Kamali-Moghaddam, M.
, Kjaer-Sorensen, K., Oxvig, C., Aransay, A. M., Falcon-Perez, J. M., Federico, A., Greco, D., Laitinen, S.
, Hayashi, Y. & Siljander, P. R. M. (2024).
Beyond basic characterization and omics: Immunomodulatory roles of platelet-derived extracellular vesicles unveiled by functional testing.
Journal of Extracellular Vesicles,
13(10), Article e12513.
https://doi.org/10.1002/jev2.12513
Palimaru Manhoobi, I., Tramm, T., Redsted, S., Bodilsen, A., Foldager, L. & Christiansen, P. (2024).
Digital breast tomosynthesis versus X-ray of the breast specimen for intraoperative margin assessment: A randomized trial.
The Breast,
73, Article 103616.
https://doi.org/10.1016/j.breast.2023.103616
Overgaard, C. K., Jamy, M.
, Radutoiu, S., Burki, F. & Dueholm, M. K. D. (2024).
Benchmarking long-read sequencing strategies for obtaining ASV-resolved rRNA operons from environmental microeukaryotes.
Molecular Ecology Resources,
24(7), Article e13991.
https://doi.org/10.1111/1755-0998.13991
Ottosson, F., Russo, F., Abrahamsson, A., MacSween, N., Courraud, J., Skogstrand, K., Melander, O., Ericson, U., Orho-Melander, M., Cohen, A. S.
, Grove, J., Mortensen, P. B., Hougaard, D. M. & Ernst, M. (2024).
Unraveling the metabolomic architecture of autism in a large Danish population-based cohort.
BMC Medicine,
22(1), Article 302.
https://doi.org/10.1186/s12916-024-03516-7
Orr, M. E., Kulasinghe, A., Kolar, G. R., Heyn, H., Plummer, J.
, Sommer Kristensen, L., Kjems, J., Mills, G., Garcia-Vallejo, J. J., Nijman, I. J., West, N. P. & Cox, A. (2024).
Sounding an Alarm over Spatial Biology.
Genetic Engineering and Biotechnology News,
44(3), 16-17.
https://doi.org/10.1089/gen.44.03.07
Olsen, W. P., Courtade, G.
, Peña-Díaz, S., Nagaraj, M., Sønderby, T. V., Mulder, F. A. A., Malle, M. G. & Otzen, D. E. (2024).
CsgA gatekeeper residues control nucleation but not stability of functional amyloid.
Protein Science,
33(10), Article e5178.
https://doi.org/10.1002/pro.5178
Okholm, T. L. H., Kamstrup, A. B., Nielsen, M. M., Hollensen, A. K., Graversgaard, M. L., Sørensen, M. H., Kristensen, L. S., Vang, S., Park, S. S., Yeo, E.
, Dyrskjøt, L., Kjems, J., Pedersen, J. S. & Damgaard, C. K. (2024).
circHIPK3 nucleates IGF2BP2 and functions as a competing endogenous RNA.
eLife,
13, Article RP91783.
https://doi.org/10.7554/eLife.91783
Nielsen, C. P. S., Arribas-Hernández, L., Han, L., Reichel, M., Woessmann, J., Daucke, R., Bressendorff, S., López-Márquez, D.
, Andersen, S. U., Pumplin, N., Schoof, E. M. & Brodersen, P. (2024).
Evidence for an RNAi-independent role of Arabidopsis DICER-LIKE2 in growth inhibition and basal antiviral resistance.
The Plant Cell,
36(6), 2289-2309.
https://doi.org/10.1093/plcell/koae067
Nielsen, J., Lauritsen, J., Pedersen, J. N., Nowak, J. S., Bendtsen, M. K., Kleijwegt, G., Lusser, K.
, Pitarch, L. C., Moreno, J. V., Schneider, M. M., Krainer, G., Goksøyr, L., Khalifé, P., Kaalund, S. S., Aznar, S.
, Kjærgaard, M., Sereikaité, V., Strømgaard, K., Knowles, T. P. J.
... Otzen, D. E. (2024).
Molecular properties and diagnostic potential of monoclonal antibodies targeting cytotoxic α-synuclein oligomers.
npj Parkinson's Disease ,
10(1), Article 139.
https://doi.org/10.1038/s41531-024-00747-6
Nguyen, M. T. A., Gobry, M. V., Sampedro Vallina, N., Pothoulakis, G.
& Andersen, E. S. (2024).
Enzymatic Assembly of Small Synthetic Genes with Repetitive Elements.
ACS Synthetic Biology,
13(3), 963-968.
https://doi.org/10.1021/acssynbio.3c00665
Murray, M., Davidson, L.
, Ferenbach, A. T., Lefeber, D.
& van Aalten, D. M. F. (2024).
Neuroectoderm phenotypes in a human stem cell model of O-GlcNAc transferase associated with intellectual disability.
Molecular Genetics and Metabolism,
142(2), Article 108492.
https://doi.org/10.1016/j.ymgme.2024.108492
Moya-Molina, M., Dorgau, B., Flood, E., Letteboer, S. J. F.
, Lorentzen, E., Coxhead, J., Smith, G., Roepman, R., Nagaraja Grellscheid, S., Armstrong, L. & Lako, M. (2024).
Deciphering the impact of PROM1 alternative splicing on human photoreceptor development and maturation.
Cell Death & Disease,
15(10), Article 721.
https://doi.org/10.1038/s41419-024-07105-7
Monti, M., Milanetti, E., Frans, M. T., Miotto, M., Di Rienzo, L., Baranov, M. V., Gosti, G.
, Somavarapu, A. K., Nagaraj, M., Golbek, T. W., Rossing, E., Moons, S. J., Boltje, T. J., van den Bogaart, G.
, Weidner, T., Otzen, D. E., Tartaglia, G. G., Ruocco, G.
& Roeters, S. J. (2024).
Two Receptor Binding Strategy of SARS-CoV-2 Is Mediated by Both the N-Terminal and Receptor-Binding Spike Domain.
The journal of physical chemistry. B,
128(2), 451-464.
https://doi.org/10.1021/acs.jpcb.3c06258
Mirarab, S.
, Rivas-González, I., Feng, S., Stiller, J., Fang, Q., Mai, U., Hickey, G., Chen, G., Brajuka, N., Fedrigo, O., Formenti, G., Wolf, J. B. W., Howe, K., Antunes, A.
, Schierup, M. H., Paten, B., Jarvis, E. D., Zhang, G. & Braun, E. L. (2024).
A region of suppressed recombination misleads neoavian phylogenomics.
Proceedings of the National Academy of Sciences (PNAS),
121(15), Article e2319506121.
https://doi.org/10.1073/pnas.2319506121
Minero, G. A. S., Møllebjerg, A., Thiesen, C., Johansen, M. I., Jørgensen, N. P., Birkedal, V., Otzen, D. E. & Meyer, R. L. (2024).
Extracellular G-quadruplexes and Z-DNA protect biofilms from DNase I, and G-quadruplexes form a DNAzyme with peroxidase activity.
Nucleic Acids Research,
52(4), 1575-1590.
https://doi.org/10.1093/nar/gkae034
Mikkelsen, J. H., Stødkilde, K., Jensen, M. P., Hansen, A. G., Wu, Q., Lorentzen, J., Graversen, J. H.
, Andersen, G. R., Fenton, R. A., Etzerodt, A., Thiel, S. & Andersen, C. B. F. (2024).
Trypanosoma brucei Invariant Surface Glycoprotein 75 Is an Immunoglobulin Fc Receptor Inhibiting Complement Activation and Antibody-Mediated Cellular Phagocytosis.
Journal of Immunology,
212(8), 1334-1344.
https://doi.org/10.4049/jimmunol.2300862
Mehmood, S.
, Thirup, S. S., Ahmed, S., Bashir, N., Saeed, A., Rafiq, M., Saeed, Q., Najam-ul-Haq, M., Khaliq, B., Ibrahim, M., Alonazi, W. B. & Akrem, A. (2024).
Crystal structure of Kunitz-type trypsin inhibitor: Entomotoxic effect of native and encapsulated protein targeting gut trypsin of Tribolium castaneum Herbst.
Computational and Structural Biotechnology Journal,
23, 3132-3142.
https://doi.org/10.1016/j.csbj.2024.07.023
McRae, E. K. S., Wan, C. J. K.
, Kristoffersen, E. L., Hansen, K., Gianni, E., Gallego, I., Curran, J. F., Attwater, J., Holliger, P.
& Andersen, E. S. (2024).
Cryo-EM structure and functional landscape of an RNA polymerase ribozyme.
Proceedings of the National Academy of Sciences (PNAS),
121(3), e2313332121. Article e2313332121.
https://doi.org/10.1073/pnas.2313332121
Mayfield, J. M., Hitefield, N. L., Czajewski, I., Vanhye, L., Holden, L., Morava, E.
, van Aalten, D. M. F. & Wells, L. (2024).
O-GlcNAc transferase congenital disorder of glycosylation (OGT-CDG): Potential mechanistic targets revealed by evaluating the OGT interactome.
Journal of Biological Chemistry,
300(9), Article 107599.
https://doi.org/10.1016/j.jbc.2024.107599
Malle, M. G., Song, P., Löffler, P. M. G., Kalisi, N.
, Yan, Y., Valero, J., Vogel, S.
& Kjems, J. (2024).
Programmable RNA Loading of Extracellular Vesicles with Toehold-Release Purification.
Journal of the American Chemical Society,
146(18), 12410-12422.
https://doi.org/10.1021/JACS.3C13123
Lykke-Andersen, S., Rouvière, J. O., Schmid, M., Gockert, M. & Jensen, T. H. (2024).
Protocol for generating customizable and reproducible plots of sequencing coverage data using the seqNdisplayR package.
STAR Protocols,
5(2), Article 102960.
https://doi.org/10.1016/j.xpro.2024.102960
Lundgren, E. J., Bergman, J., Trepel, J., Roux, E. L., Monsarrat, S., Kristensen, J. A., Pedersen, R. Ø., Pereyra, P.
, Tietje, M. & Svenning, J. C. (2024).
Functional traits—not nativeness—shape the effects of large mammalian herbivores on plant communities.
Science,
383(6682), 531-537.
https://doi.org/10.1126/science.adh2616
Liu, J.
, McRae, E. K. S., Zhang, M.
, Geary, C., Andersen, E. S. & Ren, G. (2024).
Non-averaged single-molecule tertiary structures reveal RNA self-folding through individual-particle cryo-electron tomography.
Nature Communications,
15(1), 9084.
https://doi.org/10.1038/s41467-024-52914-1
Lin, J., Bjørk, P. K., Kolte, M. V., Poulsen, E., Dedic, E., Drace, T., Andersen, S. U., Nadzieja, M., Liu, H., Castillo-Michel, H., Escudero, V., González-Guerrero, M.
, Boesen, T., Pedersen, J. S., Stougaard, J., Andersen, K. R. & Reid, D. (2024).
Zinc mediates control of nitrogen fixation via transcription factor filamentation.
Nature,
631(8019), 164-169.
https://doi.org/10.1038/s41586-024-07607-6
Lashkari, S., Jensen, S. K., Foldager, L., Larsen, T. & Vestergaard, M. (2024).
A high fat to vitamin E ratio in the feed protects and improves uptake of the natural form of vitamin E in postweaning calves.
Journal of Animal Physiology and Animal Nutrition,
108(3), 724-734.
https://doi.org/10.1111/jpn.13926
Larsen, S. T., Dannersø, J. K., Nielsen, C. J. F., Poulsen, L. R., Palmgren, M.
& Nissen, P. (2024).
Conserved N-terminal Regulation of the ACA8 Calcium Pump with Two Calmodulin Binding Sites.
Journal of Molecular Biology,
436(20), Article 168747.
https://doi.org/10.1016/j.jmb.2024.168747
Kudrin, P., Singh, A., Meierhofer, D., Kuśnierczyk, A.
& Ørom, U. A. V. (2024).
N4-acetylcytidine (ac4C) promotes mRNA localization to stress granules.
EMBO Reports,
25(4), 1814-1834.
https://doi.org/10.1038/s44319-024-00098-6
Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D.
, Bataillon, T., Manu, S., Valenzuela, A. ... Farh, K. K. H. (2024).
Identification of constrained sequence elements across 239 primate genomes.
Nature,
625(7996), 735-742.
https://doi.org/10.1038/s41586-023-06798-8
Kruse, T., Garvanska, D. H., Varga, J. K.
, Garland, W., McEwan, B. C., Hein, J. B., Weisser, M. B., Benavides-Puy, I., Chan, C. B., Sotelo-Parrilla, P., Mendez, B. L., Jeyaprakash, A. A., Schueler-Furman, O.
, Jensen, T. H., Kettenbach, A. N. & Nilsson, J. (2024).
Substrate recognition principles for the PP2A-B55 protein phosphatase.
Science Advances,
10(40), eadp5491.
https://doi.org/10.1126/sciadv.adp5491
Krissanaprasit, A., Mihalko, E., Meinhold, K., Simpson, A., Sollinger, J., Pandit, S.
, Dupont, D. M., Kjems, J., Brown, A. C.
& LaBean, T. H. (2024).
A functional RNA-origami as direct thrombin inhibitor with fast-acting and specific single-molecule reversal agents in vivo model.
Molecular Therapy,
32(7), 2286-2298.
https://doi.org/10.1016/j.ymthe.2024.05.002
Kresge, H. A., Blostein, F., Goleva, S.
, Albiñana, C., Revez, J. A., Wray, N. R.
, Vilhjálmsson, B. J., Zhu, Z., McGrath, J. J. & Davis, L. K. (2024).
Phenomewide Association Study of Health Outcomes Associated With the Genetic Correlates of 25 Hydroxyvitamin D Concentration and Vitamin D Binding Protein Concentration.
Twin Research and Human Genetics,
27(2), 69-79.
https://doi.org/10.1017/thg.2024.19
Korsgaard, U.
, García-Rodríguez, J. L., Jakobsen, T., Ahmadov, U., Dietrich, K. G.
, Vissing, S. M., Paasch, T. P., Lindebjerg, J.
, Kjems, J., Hager, H. & Kristensen, L. S. (2024).
The Transcriptional Landscape of Coding and Noncoding RNAs in Recurrent and Nonrecurrent Colon Cancer.
American Journal of Pathology,
194(8), 1424-1442.
https://doi.org/10.1016/j.ajpath.2024.04.003
Kofod Petersen, A., Forgie, A. H.
, Bindslev, D. A., Villesen, P. & Staun Larsen, L. (2024).
Automatic removal of soft tissue from 3D dental photo scans; an important step in automating future forensic odontology identification.
Scientific Reports,
14, Article 12421.
https://doi.org/10.1038/s41598-024-63198-2
Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Kaiser, M., Thodberg, K. & Herskin, M. S. (2024).
Validation of behavioural sampling techniques for 20-25 kg pigs during transport.
Livestock Science,
280, Article 105411.
https://doi.org/10.1016/j.livsci.2024.105411
Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Gould, L. M., Thodberg, K., Schrøder-Petersen, D. L.
& Herskin, M. S. (2024).
Behaviour of cull sows during transport to slaughter – Effects of journey duration, a stationary period and temperature.
Applied Animal Behaviour Science,
271, Article 106174.
https://doi.org/10.1016/j.applanim.2024.106174
Kim, S. W., Lee, H., Song, D. Y., Lee, G. H., Ji, J., Park, J. W., Han, J. H., Lee, J. W., Byun, H. J., Son, J. H., Kim, Y. R., Lee, Y., Kim, J., Jung, A., Lee, J., Kim, E., Kim, S. H., Lee, J. H., Satterstrom, F. K. ... An, J. Y. (2024).
Whole genome sequencing analysis identifies sex differences of familial pattern contributing to phenotypic diversity in autism.
Genome Medicine,
16(1), 114.
https://doi.org/10.1186/s13073-024-01385-6
Khemka, N., Morris, G., Kazemzadeh, L., Costard, L. S., Neubert, V., Bauer, S., Rosenow, F.
, Venø, M. T., Kjems, J., Henshall, D. C., Prehn, J. H. M. & Connolly, N. M. C. (2024).
Integrative network analysis of miRNA-mRNA expression profiles during epileptogenesis in rats reveals therapeutic targets after emergence of first spontaneous seizure.
Scientific Reports,
14(1), Article 15313.
https://doi.org/10.1038/s41598-024-66117-7