Institut for Molekylærbiologi og Genetik

Aarhus Universitets segl

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Seneste peer-review'ede publikationer ved MBG

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Peer-review'ede publikationer ved MBG - alle år

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Moldt, B., Yant, S. R., Andersen, P. R., Kay, M. A. & Mikkelsen, J. G. (2007). Cis-acting gene regulatory activities in the terminal regions of sleeping beauty DNA transposon-based vectors. Human Gene Therapy, 18(12), 1193-204. https://doi.org/10.1089/hum.2007.099
Laursen, L. S. & Ffrench-Constant, C. (2007). Adhesion molecules in the regulation of CNS myelination. Neuron Glia Biology, 3(4), 367-75. https://doi.org/10.1017/S1740925X08000161
Arendt, M., Rosenberg, R., Foldager, L., Sher, L. & Munk-Jørgensen, P. (2007). Withdrawal symptoms do not predict relapse among subjects treated for cannabis dependence. American Journal on Addictions, 16(6), 461-467.
Nielsen, J. S., Bøggild, A., Andersen, C. B. F., Nielsen, G., Boysen, A., Brodersen, D. E. & Valentin-Hansen, P. (2007). An Hfq-like protein in archaea: crystal structure and functional characterization of the Sm protein from Methanococcus jannaschii. RNA, 13(12), 2213-2223. https://doi.org/10.1261/rna.689007
Madsen, B. E., Villesen, P. & Wiuf, C. (2007). A periodic pattern of SNPs in the human genome. Genome Research, 17(10), 1414-9. https://doi.org/10.1101/gr.6223207
De Haas, Y., Janss, L. L. G. & Kadarmideen, H. N. (2007). Genetic correlations between body condition scores and fertility in dairy cattle using bivariate random regression models. Journal of Animal Breeding and Genetics, 124(5), 277-285. https://doi.org/10.1111/j.1439-0388.2007.00675.x
Song, Y. J. C., Lundvig, D. M. S., Huang, Y., Wei, P. G., Blumbergs, P. C., Højrup, P., Otzen, D., Halliday, G. M. & Jensen, P. H. (2007). p25α relocalizes in oligodendroglia from myelin to cytoplasmic inclusions in multiple system atrophy. American Journal of Pathology, 171(4), 1291-1303. https://doi.org/10.2353/ajpath.2007.070201
Fälth, M., Savitski, M. M., Nielsen, M. L., Kjeldsen, F., Andren, P. E. & Zubarev, R. A. (2007). SwedCAD, a database of annotated high-mass accuracy MS/MS spectra of tryptic peptides. Journal of proteome Research, 6(10), 4063-4067. https://doi.org/10.1021/pr070345h
Kjærgaard, M., Gårdsvoll, H., Hirschberg, D., Nielbo, S., Mayasundari, A., Peterson, C. B., Jansson, A., Jørgensen, T. J. D., Poulsen, F. M. & Ploug, M. (2007). Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris. Protein Science, 16(9), 1934-45. https://doi.org/10.1110/ps.072949607
Madsen, L. B., Thomsen, B., Sølvsten, C. A. E., Bendixen, C., Fredholm, M., Jørgensen, A. L. & Nielsen, A. L. (2007). Identification of the porcine homologous of human disease causing trinucleotide repeat sequences. Neurogenetics, 8(3), 207-218. https://doi.org/10.1007/s10048-007-0088-y
Zhou, Z., Hamming, O. J., Ank, N., Paludan, S. R., Nielsen, A. L., Hartmann, R. & Nielsen, A. L. (2007). Type III interferon (IFN) induces a type I IFN-like response in a restricted subset of cells through signaling pathways involving both the Jak-STAT pathway and the mitogen-activated protein kinases. Journal of Virology, 81(14), 7749-7758. https://doi.org/10.1128/JVI.02438-06
Kadarmideen, H. N. & Reverter, A. (2007). Combined genetic, genomic and transcriptomic methods in the analysis of animal traits. CAB Reviews: Perspectives in Agriculture, Veterinary Science, Nutrition and Natural Resources, 2, Artikel 042. https://doi.org/10.1079/PAVSNNR20072042
Savitski, M. M., Kjeldsen, F., Nielsen, M. L. & Zubarev, R. A. (2007). Relative specificities of water and ammonia losses from backbone fragments in collision-activated dissociation. Journal of proteome Research, 6(7), 2669-2673. https://doi.org/10.1021/pr070121z
Arendt, M., Rosenberg, R., Fjorback, L., Brandholdt, J., Foldager, L., Sher, L. & Munk-Jørgensen, P. (2007). Testing the self-medication hypothesis of depression and aggression in cannabis dependent subjects. Psychological Medicine, 37(7), 935-945.
Gendron, C., Kashiwagi, M., Ngee, H. L., Enghild, J. J., Thøgersen, I. B., Hughes, C., Caterson, B. & Nagase, H. (2007). Proteolytic activities of human ADAMTS-5: Comparative studies with ADAMTS-4. Journal of Biological Chemistry, 282(25), 18294-18306. https://doi.org/10.1074/jbc.M701523200
Von Rohr, P., Friberg, M. T. & Kadarmideen, H. N. (2007). Prediction of transcription factor binding sites using genetical genomics methods. Journal of Bioinformatics and Computational Biology, 5(3), 773-793. https://doi.org/10.1142/S0219720007002680
Chillemi, G., Fiorani, P., Bruselles, A., Castelli, S., Campagna, A., Sarra, O., Tesauro, C., Fiorentini, M., Vassallo, O., D'Annessa, I., Santoleri, S. & Desideri, A. (2007). Role of flexibility and long range communication on the function of human topoisomerase I. Italian Journal of Biochemistry, 56(2), 110-114.
Ferapontova, E. E., Shipovskov, S. & Gorton, L. (2007). Bioelectrocatalytic detection of theophylline at theophylline oxidase electrodes. Biosensors and Bioelectronics, 22(11), 2508-2515. https://doi.org/10.1016/j.bios.2006.09.034
Lorentzen, E., Dziembowski, A., Lindner, D., Seraphin, B. & Conti, E. (2007). RNA channelling by the archaeal exosome. EMBO Reports, 8(5), 470-476.
Thangarajh, M., Kisiswa, L., Pirskanen, R. & Hillert, J. (2007). The expression of BAFF-binding receptors is not altered in multiple sclerosis or myasthenia gravis. Scandinavian Journal of Immunology, 65(5), 461-466. https://doi.org/10.1111/j.1365-3083.2007.01921.x
Lerner, M., Corcoran, M., Cepeda, D., Nielsen, M. L., Zubarev, R., Pontén, F., Uhlén, M., Hober, S., Grandér, D. & Sangfelt, O. (2007). The RBCC gene RFP2 (Leu5) encodes a novel transmembrane E3 ubiquitin ligase involved in ERAD. Molecular Biology of the Cell, 18(5), 1670-1682. https://doi.org/10.1091/mbc.E06-03-0248
Taylor, D. J., Nilsson, J., A. Rod, M., Andersen, G. R., Nissen, P. & Frank, J. (2007). Structures of modified eEF2.80S ribosome complexes reveal the role of GTP hydrolysis in translocation. EMBO Journal, 26(9), 2421-2431.
Weissman, L., de Souza-Pinto, N. C., Stevnsner, T. & Bohr, V. A. (2007). DNA repair, mitochondria, and neurodegeneration. Neuroscience, 145(4), 1318-1329. https://doi.org/10.1016/j.neuroscience.2006.08.061
Rougemaille, M., Gudipati, R. K., Olesen, J. R., Thomsen, R., Seraphin, B., Libri, D. & Jensen, T. H. (2007). Dissecting mechanisms of nuclear mRNA surveillance in THO/sub2 complex mutants. EMBO Journal, 26, 2317-2326. https://doi.org/10.1038/sj.emboj.7601669
Haile, J., Holdaway, R., Oliver, K., Bunce, M., Gilbert, M. T. P., Nielsen, R., Munch, K., Ho, S. Y. W., Shapiro, B. & Willerslev, E. (2007). Ancient DNA chronology within sediment deposits: Are paleobiological reconstructions possible and is DNA leaching a factor? Molecular Biology and Evolution, 24(4), 982-989. https://doi.org/10.1093/molbev/msm016
Thaysen-Andersen, M., Thøgersen, I. B., Nielsen, H. J., Lademann, U., Brünner, N., Enghild, J. J. & Højrup, P. (2007). Rapid and individual-specific glycoprofiling of the low abundance N-glycosylated protein tissue inhibitor of metalloproteinases-1. Molecular and Cellular Proteomics, 6(4), 638-647. https://doi.org/10.1074/mcp.M600407-MCP200
Savitski, M. M., Nielsen, M. L. & Zubarev, R. A. (2007). Side-chain losses in electron capture dissociation to improve peptide identification. Analytical Chemistry, 79(6), 2296-2302. https://doi.org/10.1021/ac0619332
Kadarmideen, H. N. & Janss, L. L. G. (2007). Population and systems genetics analyses of cortisol in pigs divergently selected for stress. Physiological Genomics, 29(1), 57-65. https://doi.org/10.1152/physiolgenomics.00144.2006
Valnickova, Z., Petersen, S. V., Nielsen, S. B., Otzen, D. E. & Enghild, J. J. (2007). Heparin binding induces a conformational change in pigment epithelium-derived factor. Journal of Biological Chemistry, 282(9), 6661-6667. https://doi.org/10.1074/jbc.M610471200
Nielsen, K. B., Sørensen, S., Cartegni, L., Corydon, T. J., Doktor, T. K., Schroeder, L. D., Reinert, L. S., Elpeleg, O., Krainer, A. R., Gregersen, N., Kjems, J. & Andresen, B. S. (2007). Seemingly neutral polymorphic variants may confer immunity to splicing-inactivating mutations: a synonymous SNP in exon 5 of MCAD protects from deleterious mutations in a flanking exonic splicing enhancer. American Journal of Human Genetics, 80(3), 416-432. https://doi.org/10.1086/511992
Rojek, A. M., Skowronski, M. T., Füchtbauer, E. M., Füchtbauer, A. C., Fenton, R. A., Agre, P., Frøkiær, J. & Nielsen, S. (2007). Defective glycerol metabolism in aquaporin 9 (AQP9) knockout mice. Proceedings of the National Academy of Sciences (PNAS), 104(9), 3609-3614. https://doi.org/10.1073/pnas.0610894104
Ferapontova, E. E., Terry, J. G., Walton, A. J., Mountford, C. P., Crain, J., Buck, A. H., Dickinson, P., Campbell, C. J., Beattie, J. S., Ghazal, P. & Mount, A. R. (2007). Electrochemical deposition of Zn on TiN microelectrode arrays for microanodes. Electrochemistry Communications, 9(2), 303-309. https://doi.org/10.1016/j.elecom.2006.09.005
De Haas, Y., Janss, L. L. G. & Kadarmideen, H. N. (2007). Genetic and phenotypic parameters for conformation and yield traits in three Swiss dairy cattle breeds. Journal of Animal Breeding and Genetics, 124(1), 12-19. https://doi.org/10.1111/j.1439-0388.2007.00630.x
Glerup, S., Kløverpris, S., Laursen, L. S., Dagnaes-Hansen, F., Thiel, S., Conover, C. A. & Oxvig, C. (2007). Cell surface detachment of pregnancy-associated plasma protein-A requires the formation of intermolecular proteinase-inhibitor disulfide bonds and glycosaminoglycan covalently bound to the inhibitor. Journal of Biological Chemistry, 282(3), 1769-1778. https://doi.org/10.1074/jbc.M608454200
Andreu, R., Ferapontova, E. E., Gorton, L. & Calvente, J. J. (2007). Direct electron transfer kinetics in horseradish peroxidase electrocatalysis. Journal of Physical Chemistry B, 111(2), 469-477. https://doi.org/10.1021/jp064277i
Dziembowski, A., Lorentzen, E., Conti, E. & Seraphin, B. (2007). A single subunit, Dis3, is essentially responsible for yeast exosome core activity. Nat. Struct. Mol. Biol., 14(1), 15-22.
Madsen, L. B., Thomsen, B., Larsen, K. E., Bendixen, C., Holm, I. E., Fredholm, M., Jørgensen, A. L., Nielsen, A. L. & Nielsen, A. L. (2007). Molecular characterization and temporal expression profiling of presenilins in the developing porcine brain. BMC Neuroscience, 8(72), 1-11. https://doi.org/10.1186/1471-2202-8-72
Karring, H., Møller-Pedersen, T., Enghild, J. J. & Klintworth, G. K. (2007). Ocular proteins and proteomics. I Garner and Klintworth's Pathobiology of Ocular Disease Part B, Third Edition (s. 798-834). CRC Press.
Oddone, A., Lorentzen, E., Basquin, J., Gasch, A., Rybin, V., Conti, E. & Sattler, M. (2007). Structural and biochemical characterization of the yeast exosome component Rrp40. EMBO Reports, 8(1), 63-69.
Frank, A. M., Savitski, M. M., Nielsen, M. L., Zubarev, R. A. & Pevzner, P. A. (2007). De novo peptide sequencing and identification with precision mass spectrometry. Journal of proteome Research, 6(1), 114-123. https://doi.org/10.1021/pr060271u
Savitski, M. M., Kjeldsen, F., Nielsen, M. L. & Zubarev, R. A. (2007). Hydrogen Rearrangement to and from Radical z Fragments in Electron Capture Dissociation of Peptides. Journal of The American Society for Mass Spectrometry, 18(1), 113-120. https://doi.org/10.1016/j.jasms.2006.09.008
De Mita, S., Santoni, S., Ronfort, J. & Bataillon, T. (2007). Adaptive evolution of the symbiotic gene NORK is not correlated with shifts of rhizobial specificity in the genus Medicago. BMC Evolutionary Biology, 7. https://doi.org/10.1186/1471-2148-7-210
Tirichine, L., Sandal, N. N., Madsen, L. H., Radutoiu, E. S., Albrektsen, A. S., Sato, S., Asamizu, E., Tabata, S. & Stougaard, J. (2007). A gain-of-function mutation in a cytokinine receptor triggers spontaneous root nodule organogenesis. Science, 315, 104-107.
Otzen, D., Sehgal, P. & Nesgaard, L. (2007). Alternative membrane protein conformations in alcohol. Biochemistry, (46), 4348-4359.
Lykke-Andersen, S., Piñol-Roma, S. & Kjems, J. (2007). Alternative splicing of the ADAR1 transcript in a region that functions either as a 5'-UTR or an ORF. RNA, 13(10), 1732-1744. https://doi.org/10.1261/rna.567807
Grauslund, M., Vinding, A., Füchtbauer, A. C., Hoflander, K. F., Hjorth, P. H., Jensen, P. B., Sehested, M., Füchtbauer, E.-M. & Jensen, L. H. (2007). A mouse model for studying the interaction of bisdioxopiperazines with topoisomerase IIα in vivo. Molecular Pharmacology, 72(4), 1003-1014. https://doi.org/10.1124/mol.107.036970
Larsen, P., Dueholm, M. S., Christiansen, G., Nielsen, J. L., Otzen, D. & Nielsen, P. H. (2007). Amyloid adhesins are abundant in natural biofilms. Env. Microbiol., (9), 3077-3090.
Johnson, S. S., Hebsgaard, M. B., Christensen, T. R., Mastepanov, M., Nielsen, R., Munch, K., Brand, T., Gilbert, M. T. P., Zuber, M. T., Bunce, M., Rønn, R., Gilichinsky, D., Froese, D. & Willerslev, E. (2007). Ancient bacteria show evidence of DNA repair. Proceedings of the National Academy of Sciences (PNAS), 104(36), 14401-14405. https://doi.org/10.1073/pnas.0706787104
Abruzzi, K., Denome, S., Olesen, J. R., Assenholt, J., Haaning, L. L., Jensen, T. H. & Rosbash, M. (2007). A Novel Plasmid-Based Microarray Screen Identifies Suppressors of rrp6Δ in Saccharomyces cerevisiae. Molecular and Cellular Biology, 27(3), 1044-1055. http://mcb.asm.org/content/27/3/1044.full
Dauksaite, V., Lorentzenn, M., Besenbacher, F. & Kjems, J. (2007). Antibody-based protein detection using piezoresistive cantilever array. Nanotechnology, 18, 1-5.

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Helene Eriksen