Publikationer

Publikationer fra instituttet

Tidsskriftsforsider lavet af forskere fra MBG

Peer-review'ede publikationer ved MBG

Fields, B., Moeskjaer, S., Friman, V-P., Andersen, S. U. & Young, J. P. W. (2021). MAUI-seq: Metabarcoding using amplicons with unique molecular identifiers to improve error correction. Molecular Ecology Resources, 21(3), 703-720. https://doi.org/10.1111/1755-0998.13294

Moesgaard, L., Petersen, D., Szomek, M., Reinholdt, P., Winkler, M., Frain, K. M., Müller, P., Pedersen, B. P., Kongsted, J. & Wüstner, D. (2020). Mechanistic Insight into Lipid Binding to Yeast Niemann Pick Type C2 Protein. Biochemistry, 59(45), 4407–4420. https://doi.org/10.1021/acs.biochem.0c00574

Peltonen, J., Tuomainen, K., Sallinen, T., Faress, I., Suleymanova, I., Al-Samadi, A., Salo, T. & Åström, P. (2020). Effect of sex steroid hormones on tongue cancer cells in vitro. Anticancer Research, 40(11), 6029-6037. https://doi.org/10.21873/anticanres.14624

Poulsen, E. T., Lumi, X., Hansen, A. K., Enghild, J. J. & Petrovski, G. (2020). Protein Composition of the Subretinal Fluid Suggests Selective Diffusion of Vitreous Proteins in Retinal Detachment. Translational vision science & technology, 9(11), 16. https://doi.org/10.1167/tvst.9.11.16

Larsen, K., Bæk, R., Sahin, C., Kjær, L., Christiansen, G., Nielsen, J., Farajzadeh, L. & Otzen, D. E. (2021). Molecular characteristics of porcine alpha-synuclein splicing variants. Biochimie, 180, 121-133. https://doi.org/10.1016/j.biochi.2020.10.019

Conrad, T., Ntini, E., Lang, B., Cozzuto, L., Andersen, J. B., Marquardt, J. U., Ponomarenko, J., Tartaglia, G. G. & Ørom, U. A. V. (2020). Determination of primary microRNA processing in clinical samples by targeted pri-miR-sequencing. RNA, 26(11), 1726-1730. https://doi.org/10.1261/rna.076240.120

Frank, M., Cortleven, A., Novák, O. & Schmülling, T. (2020). Root-derived trans-zeatin cytokinin protects Arabidopsis plants against photoperiod stress. Plant Cell and Environment, 43(11), 2637-2649. https://doi.org/10.1111/pce.13860

Gonçalves, N. P., Yan, Y., Ulrichsen, M., Venø, M. T., Poulsen, E. T., Enghild, J. J., Kjems, J. & Vægter, C. B. (2020). Modulation of Small RNA Signatures in Schwann-Cell-Derived Extracellular Vesicles by the p75 Neurotrophin Receptor and Sortilin. Biomedicines, 8(11), [450]. https://doi.org/10.3390/biomedicines8110450

Dalskov, L., Møhlenberg, M., Thyrsted, J., Blay-Cadanet, J., Poulsen, E. T., Folkersen, B. H., Skaarup, S. H., Olagnier, D., Reinert, L., Enghild, J. J., Hoffmann, H. J., Holm, C. K. & Hartmann, R. (2020). SARS-CoV-2 evades immune detection in alveolar macrophages. EMBO Reports, 21(12), [e51252]. https://doi.org/10.15252/embr.202051252

Moldovan, L. I., Tsoi, L. C., Ranjitha, U., Hager, H., Weidinger, S., Gudjonsson, J. E., Kjems, J. & Kristensen, L. S. (2021). Characterization of Circular RNA Transcriptomes in Psoriasis and Atopic Dermatitis Reveals Disease-specific Expression Profiles. Experimental Dermatology, 30(8), 1187-1196. https://doi.org/10.1111/exd.14227

Kerwin, P. & von Philipsborn, A. C. (2020). Copulation Song in Drosophila: Do Females Sing to Change Male Ejaculate Allocation and Incite Postcopulatory Mate Choice? BioEssays, 42(11), [2000109]. https://doi.org/10.1002/bies.202000109

Dou, Y., Barbosa, I., Jiang, H., Iasillo, C., Molloy, K. R., Schulze, W. M., Cusack, S., Schmid, M., Le Hir, H., LaCava, J. & Jensen, T. H. (2020). NCBP3 positively impacts mRNA biogenesis. Nucleic Acids Research, 48(18), 10413-10427. https://doi.org/10.1093/nar/gkaa744

Dou, Y., Kalmykova, S., Pashkova, M., Oghbaie, M., Jiang, H., Molloy, K. R., Chait, B. T., Rout, M. P., Fenyö, D., Jensen, T. H., Altukhov, I. & LaCava, J. (2020). Affinity proteomic dissection of the human nuclear cap-binding complex interactome. Nucleic Acids Research, 48(18), 10456-10469. https://doi.org/10.1093/nar/gkaa743

Bertelsen, M. B., Senissar, M., Nielsen, M. H., Bisiak, F., Cunha, M. V., Molinaro, A. L., Daines, D. A. & Brodersen, D. E. (2021). Structural Basis for Toxin Inhibition in the VapXD Toxin-Antitoxin System. Structure, 29(2), 139-150.e3. https://doi.org/10.1016/j.str.2020.10.002

Christensen, B., Toth, A. E., Nielsen, S. S. E., Scavenius, C., Petersen, S. V., Enghild, J. J., Rasmussen, J. T., Nielsen, M. S. & Sørensen, E. S. (2020). Transport of a peptide from bovine α_s1-casein across models of the intestinal and blood–brain barriers. Nutrients, 12(10), [3157]. https://doi.org/10.3390/nu12103157

Seidenbecher, S. E., Sanders, J. I., von Philipsborn, A. C. & Kvitsiani, D. (2020). Reward foraging task and model-based analysis reveal how fruit flies learn value of available options. PLOS ONE, 15(10 October), [e0239616]. https://doi.org/10.1371/journal.pone.0239616

Wang, Z., D Annessa, I., Tesauro, C., Ottaviani, A., Soren, B. C., Dasari, J. B., Messina, B., Thareparambil, A. & Fiorani, P. (2019). The human DNA topoisomerase I mutant Gly717Asp: Higher religation rate is not always associated with camptothecin resistance. Archives of Biochemistry and Biophysics, 663, 165-172.

Dasari, J. B., Soren, B. C., Ottaviani, A., Tesauro, C., Marino, S., Messina, B. & Fiorani, P. (2020). Swapping of The N-Terminal Domain of Human Topoisomerase 1B with the Corresponding Plasmodium Falciparum Counterpart Strongly Impairs Enzyme Activity. Reports of Biochemistry and Molecular Biology, 8(4), 366-375. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7275839/

Yan, Y., Chang, C., Su, J., Venø, M. T. & Kjems, J. (2020). Osteoblastogenesis Alters Small RNA Profiles in EVs Derived from Bone Marrow Stem Cells (BMSCs) and Adipose Stem Cells (ASCs). Biomedicines, 8(10), [387]. https://doi.org/10.3390/biomedicines8100387

Lukassen, M. V., Poulsen, E. T., Donaghy, J., Mogensen, E. H., Christie, K. A., Roshanravan, H., DeDioniso, L., Nesbit, M. A., Moore, T. & Enghild, J. J. (2020). Protein Analysis of the TGFBI^R124H Mouse Model Gives Insight into Phenotype Development of Granular Corneal Dystrophy. Proteomics - Clinical Applications, 14(6), [1900072]. https://doi.org/10.1002/prca.201900072

Sweet, M. E., Zhang, X., Erdjument-Bromage, H., Dubey, V., Khandelia, H., Neubert, T. A., Pedersen, B. P. & Stokes, D. L. (2020). Serine phosphorylation regulates the P-type potassium pump KdpFABC. eLife, 9, [e55480]. https://doi.org/10.7554/eLife.55480

Zhang, J., Song, L., Pedersen, D. V., Li, A., Lambris, J. D., Andersen, G. R., Mollnes, T. E., Ma, Y. J. & Garred, P. (2020). Soluble collectin-12 mediates C3-independent docking of properdin that activates the alternative pathway of complement. eLife, 9. https://doi.org/10.7554/eLife.60908

Knoth, J., Pötter, R., Jürgenliemk-Schulz, I. M., Haie-Meder, C., Fokdal, L., Sturdza, A., Hoskin, P., Mahantshetty, U., Segedin, B., Bruheim, K., Wiebe, E., Rai, B., Cooper, R., van der Steen-Banasik, E., van Limbergen, E., Pieters, B. R., Sundset, M., Tan, L. T., Nout, R. A. ... Schmid, M. P. (2020). Clinical and imaging findings in cervical cancer and their impact on FIGO and TNM staging – An analysis from the EMBRACE study. Gynecologic Oncology, 159(1), 136-141. https://doi.org/10.1016/j.ygyno.2020.07.007

Hajipour, M. J., Mohammad-Beigi, H., Nabipour, I., Mahmoudi, N., Azhdarzadeh, M., Derakhshankhah, H., El Dawud, D., Mohammadinejad, R. & Otzen, D. (2020). Amyloid fibril inhibition, acceleration, or fragmentation: Are nano-based approaches advance in the right direction? Nano Today, 35(December), [100983]. https://doi.org/10.1016/j.nantod.2020.100983

Bodó, K., Hayashi, Y., Gerencsér, G., László, Z., Kéri, A., Galbács, G., Telek, E., Mészáros, M., Deli, M. A., Kokhanyuk, B., Németh, P. & Engelmann, P. (2020). Species-specific sensitivity of Eisenia earthworms towards noble metal nanoparticles: a multiparametric in vitro study. Environmental Science: Nano, 7(11), 3509-3525. https://doi.org/10.1039/c9en01405e

Zhang, B., Nandakumar, R., Reinert, L. S., Huang, J., Laustsen, A., Gao, Z., Sun, C., Jensen, S. B., Troldborg, A., Assil, S., Berthelsen, M. F., Scavenius, C., Zhang, Y., Windross, S. J., Olagnier, D., Prabakaran, T., Bodda, C., Narita, R., Cai, Y. ... Paludan, S. R. (2020). Author Correction: STEEP mediates STING ER exit and activation of signaling (Nature Immunology, (2020), 21, 8, (868-879), 10.1038/s41590-020-0730-5). Nature Immunology, 21(11), 1468-1469. https://doi.org/10.1038/s41590-020-0803-5

Bodó, K., Baranzini, N., Girardello, R., Kokhanyuk, B., Németh, P., Hayashi, Y., Grimaldi, A. & Engelmann, P. (2020). Nanomaterials and Annelid Immunity: A Comparative Survey to Reveal the Common Stress and Defense Responses of Two Sentinel Species to Nanomaterials in the Environment. Biology, 9(10), [307]. https://doi.org/10.3390/biology9100307

Shrestha, A., Zhong, S., Therrien, J., Huebert, T., Sato, S., Mun, T., Andersen, S. U., Stougaard, J., Lepage, A., Niebel, A., Ross, L. & Szczyglowski, K. (2021). Lotus japonicus Nuclear Factor YA1, a nodule emergence stage-specific regulator of auxin signalling. New Phytologist, 229(3), 1535-1552. https://doi.org/10.1111/nph.16950

Hjortebjerg, R., Espelund, U., Rasmussen, T. R., Folkersen, B., Steiniche, T., Georgsen, J. B., Oxvig, C. & Frystyk, J. (2020). Pregnancy-Associated Plasma Protein-A2 Is Associated With Mortality in Patients With Lung Cancer. Frontiers in Endocrinology, 11, [614]. https://doi.org/10.3389/fendo.2020.00614

Rossnerova , A., Izzotti , A., Pulliero , A., Bast, A., Rattan, S. & Rossner , P. (2020). The Molecular Mechanisms of Adaptive Response Related to Environmental Stress. International Journal of Molecular Sciences , 21(19), [7053]. https://doi.org/10.3390/ijms21197053

Pedersen, H., Jensen, R. K., Jensen, J. M. B., Fox, R., Pedersen, D. V., Olesen, H. G., Hansen, A. G., Christiansen, D., Mazarakis, S. M. M., Lojek, N., Hansen, P., Gadeberg, T. A. F., Zarantonello, A., Laursen, N. S., Mollnes, T. E., Johnson, M. B., Stevens, B., Thiel, S. & Andersen, G. R. (2020). A Complement C3-Specific Nanobody for Modulation of the Alternative Cascade Identifies the C-Terminal Domain of C3b as Functional in C5 Convertase Activity. Journal of Immunology, 205(8). https://doi.org/10.4049/jimmunol.2000752

Troldborg, A., Halkjær, L., Pedersen, H., Hansen, A., Loft, A. G., Lindegaard, H., Stengaard-Pedersen, K., Graversen, J. H., Palarasah, Y. & Thiel, S. (2020). Complement activation in human autoimmune diseases and mouse models; employing a sandwich immunoassay specific for C3dg. Journal of Immunological Methods, 486, [112866]. https://doi.org/10.1016/j.jim.2020.112866

Krainer, G., Hartmann, A., Bogatyr, V., Nielsen, J., Schlierf, M. & Otzen, D. E. (2020). SDS-induced multi-stage unfolding of a small globular protein through different denatured states revealed by single-molecule fluorescence. Chemical Science, 11(34), 9141-9153. https://doi.org/10.1039/d0sc02100h

Kristensen, L. S., Ebbesen, K. K., Sokol, M., Jakobsen, T., Korsgaard, U., Eriksen, A. C., Hansen, T. B., Kjems, J. & Hager, H. (2020). Spatial expression analyses of the putative oncogene ciRS-7 in cancer reshape the microRNA sponge theory. Nature Communications, 11, [4551]. https://doi.org/10.1038/s41467-020-18355-2

Wu, M., Karadoulama, E., Lloret-Llinares, M., Rouviere, J. O., Vaagensø, C. S., Moravec, M., Li, B., Wang, J., Wu, G., Gockert, M., Pelechano, V., Jensen, T. H. & Sandelin, A. (2020). The RNA exosome shapes the expression of key protein-coding genes. Nucleic Acids Research, 48(15), 8509-8528. https://doi.org/10.1093/nar/gkaa594

Ferguson, S., Major, A. S., Sullivan, J. T., Bourke, S. D., Kelly, S. J., Perry, B. J. & Ronson, C. W. (2020). Rhizobium leguminosarum bv. trifolii NodD2 Enhances Competitive Nodule Colonization in the Clover-Rhizobium Symbiosis. Applied and Environmental Microbiology, 86(18). https://doi.org/10.1128/AEM.01268-20

Aminzadeh, A., Tiwari, M. K., Mamah Mustapha, S. S., Navarrete, S. J., Henriksen, A. B., Møller, I. M., Krogfelt, K. A., Bjerrum, M. J. & Jørgensen, R. (2020). Detoxification of toxin A and toxin B by copper ion-catalyzed oxidation in production of a toxoid-based vaccine against Clostridioides difficile. Free Radical Biology and Medicine, 160, 433-446. https://doi.org/10.1016/j.freeradbiomed.2020.08.021

Mohammad-Beigi, H., Hayashi, Y., Zeuthen, C. M., Eskandari, H., Scavenius, C., Juul-Madsen, K., Vorup-Jensen, T., Enghild, J. J. & Sutherland, D. S. (2020). Mapping and identification of soft corona proteins at nanoparticles and their impact on cellular association. Nature Communications, 11, [4535]. https://doi.org/10.1038/s41467-020-18237-7

Rattan, S. (2020). Biological health and homeodynamic space. I Explaining Health Across the Sciences (s. 43-51). Springer. Healthy Ageing and Longevity Bind 12 https://doi.org/10.1007/978-3-030-52663-4_4

Eskandari, H., Ghanadian, M., Noleto-Dias, C., Lomax, C., Tawfike, A., Christiansen, G., Sutherland, D. S., Ward, J. L., Mohammad-Beigi, H. & Otzen, D. E. (2020). Inhibitors of α-Synuclein fibrillation and oligomer toxicity in Rosa damascena: the all-pervading powers of flavonoids and phenolic glycosides. ACS Chemical Neuroscience, 11(19), 3161–3173. https://doi.org/10.1021/acschemneuro.0c00528

Møller, I. M., Rao, R. S. P., Jiang, Y., Thelen, J. J. & Xu, D. (2020). Proteomic and Bioinformatic Profiling of Transporters in Higher Plant Mitochondria. Biomolecules, 10(8), [1190]. https://doi.org/10.3390/biom10081190

Darvishi, N., Rahimi, K., Mansouri, K., Fathi, F., Menbari, M. N., Mohammadi, G. & Abdi, M. (2020). MiR-646 prevents proliferation and progression of human breast cancer cell lines by suppressing HDAC2 expression. Molecular and Cellular Probes, 53, [101649]. https://doi.org/10.1016/j.mcp.2020.101649

Ørom, U. A. V. (2020). Preface. Methods in Molecular Biology, 2161, v.

Wong, J. E. M. M. & Blaise, M. (2020). Report of false positives when using zymography to assess peptidoglycan hydrolytic activity of an endopeptidase with multiple LysM domains. Biochimie, 177, 25-29. https://doi.org/10.1016/j.biochi.2020.07.014

Dyla, M. & Kjaergaard, M. (2020). Intrinsically disordered linkers control tethered kinases via effective concentration. Proceedings of the National Academy of Sciences of the United States of America, 117(35). https://doi.org/10.1073/pnas.2006382117

Kaadt, E., Højgaard, K., Mumm, B., Christiansen, S. L., Müller, H. K., Damgaard, C. K. & Elfving, B. (2021). Dysregulation of miR-185, miR-193a, and miR-450a in the skin are linked to the depressive phenotype. Progress in Neuro-Psychopharmacology & Biological Psychiatry, 104, [110052]. https://doi.org/10.1016/j.pnpbp.2020.110052

Mendoza-Suárez, M. A., Geddes, B. A., Sánchez-Cañizares, C., Ramírez-González, R. H., Kirchhelle, C., Jorrin, B. & Poole, P. S. (2020). Optimizing Rhizobium-legume symbioses by simultaneous measurement of rhizobial competitiveness and N₂ fixation in nodules. Proceedings of the National Academy of Sciences of the United States of America, 117(18), 9822-9831. https://doi.org/10.1073/pnas.1921225117

iNEXT Consortium (2018). iNEXT: a European facility network to stimulate translational structural biology. FEBS Letters, 592(12), 1909-1917. https://doi.org/10.1002/1873-3468.13062

Schytte, G. N., Christensen, B. S., Bregenov, I. & Sørensen, E. S. (2020). Ras-transformation reduce FAM20C expression and osteopontin phosphorylation. Bioscience Reports, 40(9), [BSR20194378]. https://doi.org/10.1042/BSR20194378

Christensen, B., Schytte, G. N., Scavenius, C., Enghild, J. J., McKee, M. D. & Sørensen, E. S. (2020). FAM20C-Mediated Phosphorylation of MEPE and Its Acidic Serine- and Aspartate-Rich Motif. JBMR Plus, 4(8), [e10378]. https://doi.org/10.1002/jbm4.10378

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Revideret 25.10.2021 -

Lisbeth Heilesen