Institut for Molekylærbiologi og Genetik

Aarhus Universitets segl

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Seneste peer-review'ede publikationer ved MBG

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Peer-review'ede publikationer ved MBG - alle år

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Morgensen, JE., Ferreras, M., Wimmer, R., Petersen, S. V., Enghild, J. J. & Otzen, D. (2007). The Major Allergen from Birch Tree Pollen, Bet v 1, Binds and Permeabilizes Membranes. Biochemistry.
Rattan, S. (2007). The science of healthy aging: genes, milieu, and chance. New York Academy of Sciences. Annals, 1114, 1-10.
Olesen, C., Picard, M., Winther, A.-M. L., Nielsen, C. G., Morth, J. P., Oxvig, C., Møller, J. V. & Nissen, P. (2007). The structural basis of calcium transport by the calcium pump. Nature, 450(7172), 1036-1042. https://doi.org/10.1038/nature06418
Petersen, S. V., Valnickova, Z., Oury, T. D., Crapo, J. D., Nielsen, N. C. & Enghild, J. J. (2007). The Subunit Composition of Human Extracellylar Superoxide Dismutate (EC-SOD) Regulate Enzymatic Activity. BMC Biochemistry, 8, 19.
Kuhn, R. M., Karolchik, D., Zweig, A. S., Trumbower, H., Thomas, D. J., Thakkapallayil, A., Sugnet, C. W., Stanke, M., Smith, K. E., Siepel, A., Rosenbloom, K. R., Rhead, B., Raney, B. J., Pohl, A., Pedersen, J. S., Hsu, F., Hinrichs, A. S., Harte, R. A., Diekhans, M. ... Pedersen, J. S. (2007). The UCSC genome browser database: update 2007. Nucleic Acids Research, 35(Database issue), D668-73. https://doi.org/10.1093/nar/gkl928
Valnickova, Z., Thøgersen, I., Potempa, J. & Enghild, J. J. (2007). Thrombin-activable fibrinolysis inhibitor (TAFI) zymogen is an active carboxypeptidase. Journal of Biological Chemistry, 282(2), 1072-9.
Barciszewska, M., Barciszewska, A. M. & Rattan, S. (2007). TLC-based detection of methylated cytosine: application to aging epigenetics. Biogerontology, 8(6), 673-678.
Novotny, G. W., Sonne, S., Nielsen, J. E., Jonstrup, S. P., Hansen, M. A., Skakkebaek, N. E., Rajpert-De Meyts, E., Kjems, J. & Leffers, H. (2007). Translational repression of E2F1 mRNA in carcinoma in situ and normal testis correlates with expression of the miR-17-92 cluster. Cell Death and Differentiation, 14(4), 879-882. https://doi.org/10.1038/sj.cdd.4402090
Leppälä, J., Bechsgaard, J. S., Schierup, M. H. & Savolainen, O. (2007). Transmission ratio distortion in Arabidopsis lyrata: effects of population divergence and the S-locus. Heredity, 100(1), 71-8. https://doi.org/10.1038/sj.hdy.6801066
Frøhlich, R. F., Veigaard, C., Andersen, F. F., McClendon, A. K., Gentry, A. K., Andersen, A. H., Osherroff, N., Stevnsner, T. V. & Knudsen, B. R. (2007). Tryptophane-205 of human topoisomerase I is essential for camptothecin inhibition of negative but not positive supercoil removal. Nucleic Acid Res., 35, 6170-6180.
Nielsen, M. M., Andersen, K. K., Westh, P. & Otzen, D. (2007). Unfolding of ß-sheet proteins in SDS. Biophysical Journal, (92), 3674-3685.
Dong, M., Howard, K. A., Oupicky, D., Bisht, H. J., Kjems, J. & Besenbacher, F. (2007). Visualisation of Thermal Activated Nanocarriers Using In Situ Atomic Force Microscopy. Nanotechnology.
Dong, M. D., Howard, K. A., Oupicky, D., Bisht, H., Kjems, J. & Besenbacher, F. (2007). Visualization of thermally activated nanocarriers using in situ atomic force microscopy: Nanotechnology. Nanotechnology, 18(18), Artikel 185501. https://doi.org/10.1088/0957-4484/18/18/185501
Wuerges, J., Geremia, S., Fedosov, S. & Randaccio, L. (2007). Vitamin B12 transport proteins: Crystallographic analysis of β-axial ligand substitutions in cobalamin bound to transcobalamin. IUBMB Life, 59(11), 722-729.
Otzen, D. & Nielsen, P. H. (2007). We find them here, we find them there: Functional bacterial amyloid. Cellular and Molecular Life Sciences, 65, 910-927.
Jørgensen, F. G., Schierup, M. H. & Clark, A. G. (2006). Heterogeneity in Regional GC Content and Differential Usage of Codons and Amino Acids in GC-Poor and GC-Rich Regions of the Genome of Apis mellifera. Molecular Biology and Evolution. https://doi.org/10.1093/molbev/msl190
Munch, K. & Krogh, A. (2006). Automatic generation of gene finders for eukaryotic species. BMC Bioinformatics, 7, Artikel 263. https://doi.org/10.1186/1471-2105-7-263
Severinsen, J. E., Bjarkam, C. R., Kiaer-Larsen, S., Olsen, I. M., Nielsen, M. M., Blechingberg, J., Nielsen, A. L., Holm, I. E., Foldager, L., Young, B. D., Muir, W. J., Blackwood, D. H. R., Corydon, T. J., Mors, O. & Børglum, A. D. (2006). Evidence implicating BRD1 with brain development and susceptibility to both schizophrenia and bipolar affective disorder. Molecular Psychiatry, 11(12), 1126-38. https://doi.org/10.1038/sj.mp.4001885
Kammler, S., Otte, M., Hauber, I., Kjems, J., Hauber, J. & Schaal, H. (2006). The strength of the HIV-1 3' splice sites affects Rev function. Retrovirology, 3(89), 1-20. https://doi.org/10.1186/1742-4690-3-89
Dupont, D. M., Blouse, G. E., Hansen, M., Mathiasen, L., Kjelgaard, S., Jensen, J. K., Christensen, A., Gils, A., Declerck, P. J., Andreasen, P. A. & Wind, T. (2006). Evidence for a pre-latent form of the serpin plasminogen activator inhibitor-1 with a detached beta-strand 1C. Journal of Biological Chemistry, 281(47), 36071-81. https://doi.org/10.1074/jbc.M606851200
Skeldal, S., Larsen, J. V., Pedersen, K. E., Petersen, H. H., Egelund, R., Christensen, A., Jensen, J. K., Gliemann, J. & Andreasen, P. A. (2006). Binding areas of urokinase-type plasminogen activator-plasminogen activator inhibitor-1 complex for endocytosis receptors of the low-density lipoprotein receptor family, determined by site-directed mutagenesis. FEBS journal, 273(22), 5143-59. https://doi.org/10.1111/j.1742-4658.2006.05511.x
Walter, P., Klein, F., Lorentzen, E., Ilchmann, A., Klug, G. & Evguenieva-Hackenberg, E. (2006). Characterization of native and reconstituted exosome complexes from the hyperthermophilic archaeon Sulfolobus solfataricus. Mol. Microbiol., 62(4), 1076-1089.
Jensen, J. K., Malmendal, A., Schiøtt, B., Skeldal, S., Pedersen, K. E., Celik, L., Nielsen, N. C., Andreasen, P. A. & Wind, T. (2006). Inhibition of plasminogen activator inhibitor-1 binding to endocytosis receptors of the low-density-lipoprotein receptor family by a peptide isolated from a phage display library. Biochemical Journal, 399(3), 387-96. https://doi.org/10.1042/BJ20060533
Glémin, S., Vimond, L., Ronfort, J., Bataillon, T. & Mignot, A. (2006). Marker-based investigation of inbreeding depression in the endangered species Brassica insularis. Heredity, 97(4), 304-311. https://doi.org/10.1038/sj.hdy.6800870
Glerup, S., Kløverpris, S. & Oxvig, C. (2006). The proform of the eosinophil major basic protein binds the cell surface through a site distinct from its C-type lectin ligand-binding region. Journal of Biological Chemistry, 281(42), 31509-31516. https://doi.org/10.1074/jbc.M605824200
Kadarmideen, H. N., Li, Y. & Janss, L. C. G. (2006). Gene-environment interactions in complex diseases: Genetic models and methods for QTL mapping in multiple half-sib populations. Genetical Research, 88(2), 119-131. https://doi.org/10.1017/S0016672306008391
Fredslund, F., Jenner, L. B., Husted, L. B., Nyborg, J., Andersen, G. R. & Sottrup-Jensen, L. (2006). The structure of bovine complement component 3 reveals the basis for thioester function. Journal of Molecular Biology, 361(1), 115-127. https://doi.org/10.1016/j.jmb.2006.06.009
Bono, F., Ebert, J., Lorentzen, E. & Conti, E. (2006). The crystal structure of the exon junction complex reveals how it maintains a stable grip on mRNA. Cell, 126(4), 713-725.
Lützelberger, M., Reinert, L. S., Das, A. T., Berkhout, B. & Kjems, J. (2006). A novel splice donor site in the gag-pol gene is required for HIV-1 RNA stability. Journal of Biological Chemistry, 281(27), 18644-18651. https://doi.org/10.1074/jbc.M513698200
Bergqvist, S., Croy, C. H., Kjærgaard, M., Huxford, T., Ghosh, G. & Komives, E. A. (2006). Thermodynamics reveal that helix four in the NLS of NF-kappaB p65 anchors IkappaBalpha, forming a very stable complex. Journal of Molecular Biology, 360(2), 421-34. https://doi.org/10.1016/j.jmb.2006.05.014
Johannessen, M. M., Damgaard, C., Andersen, B. A. & Jørgensen, R. B. (2006). Competition affects the production of first backcross offspring on F 1-hybrids, Brassica napus × B. rapa. Euphytica, 150(1-2), 17-25. https://doi.org/10.1007/s10681-006-9083-x
Sanggaard, K. W., Sonne-Schmidt, C. S., Jacobsen, C., Thøgersen, I. B., Valnickova, Z., Wisniewski, H. G. & Enghild, J. J. (2006). Evidence for a two-step mechanism involved in the formation of covalent HC·TSG-6 complexes. Biochemistry, 45(24), 7661-7668. https://doi.org/10.1021/bi060106s
Kadarmideen, H. N., Von Rohr, P. & Janss, L. L. G. (2006). From genetical genomics to systems genetics: Potential applications in quantitative genomics and animal breeding. Mammalian Genome, 17(6), 548-564. https://doi.org/10.1007/s00335-005-0169-x
Marques, J. T., Devosse, T., Wang, D., Zamanian-Daryoush, M., Serbinowski, P., Hartmann, R., Fujita, T., Behlke, M. A. & Williams, B. R. G. (2006). A structural basis for discriminating between self and nonself double-stranded RNAs in mammalian cells. Nature Biotechnology, 24(5), 559-565.
Munch, K., Gardner, P. P., Arctander, P. & Krogh, A. (2006). A hidden Markov model approach for determining expression from genomic tiling micro arrays. BMC Bioinformatics, 7, Artikel 239. https://doi.org/10.1186/1471-2105-7-239
Ostrowski, M. F., David, J., Santoni, S., McKhann, H., Reboud, X., Le Corre, V., Camilleri, C., Brunel, D., Bouchez, D., Faure, B. & Bataillon, T. (2006). Evidence for a large-scale population structure among accessions of Arabidopsis thaliana: Possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology, 15(6), 1507-1517. https://doi.org/10.1111/j.1365-294X.2006.02865.x
Lorentzen, E. & Conti, E. (2006). The exosome and the proteasome: nano-compartments for degradation. Cell, 125(4), 651-654.
Nielsen, E. R., Eskildsen-Helmond, Y. E. G. & Rattan, S. I. S. (2006). MAP kinases and heat shock-induced hormesis in human fibroblasts during serial passaging in vitro. New York Academy of Sciences. Annals, 1067, 343-348. https://doi.org/10.1196/annals.1354.048
Kassen, R. & Bataillon, T. (2006). Distribution of fitness effects among beneficial mutations before selection in experimental populations of bacteria. Nature Genetics, 38(4), 484-488. https://doi.org/10.1038/ng1751
Mohey, R., Tolstrup, M., Jørgensen, L. B., Møller, B. K., Black, F. T., Kjems, J. & Obel, N. (2006). HIV-1 reverse Transcriptase Gene 103K/N and 184M/V Combinations in Tandem: Detection and Quantification of HIV-1 Populations in the CD45RO+ T-cell Compartment by a Double-ARMS Real-Time PCR assay. Journal of Acquired Immune Deficiency Syndromes (1999), 41(2), 160-167. https://doi.org/10.1097/01.qai.0000191998.70034.64
Karacaören, B., Jaffrézic, F. & Kadarmideen, H. N. (2006). Genetic parameters for functional traits in dairy cattle from daily random regression models. Journal of Dairy Science, 89(2), 791-798. https://doi.org/10.3168/jds.S0022-0302(06)72141-5
Paca-Uccaralertkun, S., Damgaard, C. K., Auewarakul, P., Thitithanyanont, A., Suphaphiphat, P., Essex, M., Kjems, J. & Lee, T.-H. (2006). The Effect of a Single Nucleotide Substitution in the Splicing Silencer in the tat/rev Intron on HIV Type 1 Envelope Expression. AIDS Research and Human Retroviruses, 22(1), 76-82. https://doi.org/10.1089/aid.2006.22.76
Singh, R., Kølvraa, S., Bross, P., Jensen, U. B., Gregersen, N., Tan, Q., Knudsen, C. & Rattan, S. I. S. (2006). Reduced heat shock response in human mononuclear cells during aging and its association with polymorphisms in HSP70 genes. Cell Stress & Chaperones, 11(3), 208-215. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1576475/
Fredslund, J., Madsen, L. H., Hougaard, B. K., Nielsen, A. M., Nielsen, A. M., Bertioli, D., Sandal, N. N., Schauser, L. & Stougaard, J. (2006). A general pipeline for the development of anchor markers for comparative genomics in plants. BMC Genomics, 7, 207.
Jonstrup, S. P., Koch, J. & Kjems, J. (2006). A microRNA detection system based on padlock probes and rolling circle amplification. RNA, 12(9), 1747-1752. https://doi.org/10.1261/rna.110706
Thomsen, B., Horn, P., Panitz, F., Bendixen, E., Petersen, A. H., Holm, L.-E., Nielsen, V. H., Agerholm, J. S., Arnbjerg, J. & Bendixen, C. (2006). A missense mutation in the bovine SLC35A3 gene, encoding a UDP-N-acetylglucosamine transporter, causes complex vertebral malformation. Genome Research, 16, 97-105. https://doi.org/10.1101/gr.3690506
Beer, C. & Pedersen, L. (2006). Amphotropic murine leukemia virus is preferentially attached to cholesterol-rich microdomains after binding to mouse fibroblasts. Virol. J., 2(21).
Villesen, P. & Fredsted, T. (2006). A new sex identification tool: one primer pair can reliably sex ape and monkey DNA samples. Conservation Genetics, 1-5.
Sironen, A., Thomsen, B., Andersson, M., Ahola, V. & Vilkki, J. (2006). An intronic insertion in KLP2 result in aberrant splicing and causes the immotile short-tail sperm defect in the pig. Proceedings of the National Academy of Sciences (PNAS), 103(13), 5006-5011. https://doi.org/10.1073/pnas.0506318103
Pollard, K. S., Salama, S. R., Lambert, N., Lambot, M.-A., Coppens, S., Pedersen, J. S., Katzman, S., King, B., Onodera, C., Siepel, A., Kern, A. D., Dehay, C., Igel, H., Ares, M., Vanderhaeghen, P. & Haussler, D. (2006). An RNA gene expressed during cortical development evolved rapidly in humans. Nature, 443(7108), 167-72. https://doi.org/10.1038/nature05113

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Revideret 17.02.2026
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Helene Eriksen