Zhang, Y., Yu, H., Wang, D., Lei, X., Meng, Y., Zhang, N., Chen, F., Lv, L., Pan, Q., Qin, H., Zhang, Z.
, van Aalten, D. M. F. & Yuan, K. (2023).
Protein O-GlcNAcylation homeostasis regulates facultative heterochromatin to fine-tune sog-Dpp signaling during Drosophila early embryogenesis.
Journal of Genetics and Genomics,
50(12), 948-959.
https://doi.org/10.1016/j.jgg.2023.05.014
Kretsch, R. C.
, Andersen, E. S., Bujnicki, J. M., Chiu, W., Das, R., Luo, B., Masquida, B.
, McRae, E. K. S., Schroeder, G. M., Su, Z., Wedekind, J. E., Xu, L., Zhang, K., Zheludev, I. N., Moult, J. & Kryshtafovych, A. (2023).
RNA target highlights in CASP15: Evaluation of predicted models by structure providers.
Proteins: Structure, Function and Bioinformatics,
91(12), 1600-1615.
https://doi.org/10.1002/prot.26550
Poulsgaard, G. A., Sørensen, S. G., Juul, R. I., Nielsen, M. M. & Pedersen, J. S. (2023).
Sequence dependencies and mutation rates of localized mutational processes in cancer.
Genome Medicine,
15(1), Artikel 63.
https://doi.org/10.1186/s13073-023-01217-z
Frank, M., Fechete, L. I., Tedeschi, F., Nadzieja, M., Nørgaard, M. M. M., Montiel, J., Andersen, K. R., Schierup, M. H., Reid, D. & Andersen, S. U. (2023).
Single-cell analysis identifies genes facilitating rhizobium infection in Lotus japonicus.
Nature Communications,
14(1), Artikel 7171.
https://doi.org/10.1038/s41467-023-42911-1
Winters, J. F. M., Kobek-Kjeldager, C., Foldager, L., Tecles, F.
& Pedersen, L. J. (2023).
Stress responses in pigs postweaning: Effect of heavier hybrid and weaning intact litters.
Applied Animal Behaviour Science,
269, Artikel 106106.
https://doi.org/10.1016/j.applanim.2023.106106
Cordiner, R. A., Dou, Y., Thomsen, R., Bugai, A., Granneman, S.
& Heick Jensen, T. (2023).
Temporal-iCLIP captures co-transcriptional RNA-protein interactions.
Nature Communications,
14(1), Artikel 696.
https://doi.org/10.1038/s41467-023-36345-y
Dauben, H., Matic, I.
, Kidmose, R. T., Pedersen, B. P., Saha, T., Di Virgilio, M. & Sung, J. H. (2023).
Turning science into cover art.
Trends in Biochemical Sciences,
48(12), 1009-1011.
https://doi.org/10.1016/j.tibs.2023.09.006
Bergman, J., Pedersen, R., Lundgren, E. J., Lemoine, R. T., Monsarrat, S., Pearce, E. A., Schierup, M. H. & Svenning, J. C. (2023).
Worldwide Late Pleistocene and Early Holocene population declines in extant megafauna are associated with Homo sapiens expansion rather than climate change.
Nature Communications,
14(1), Artikel 7679.
https://doi.org/10.1038/s41467-023-43426-5
Dieudonné, T., Kümmerer, F.
, Laursen, M. J., Stock, C., Flygaard, R. K., Khalid, S., Lenoir, G.
, Lyons, J. A., Lindorff-Larsen, K.
& Nissen, P. (2023).
Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nature Communications,
14, Artikel 7492.
https://doi.org/10.1038/s41467-023-42828-9
Jespersen, J. H., Harazin, A., Bohn, A. B., Christensen, A., Lorentzen, E. & Lorentzen, A. (2023).
Analysis of cortical cell polarity by imaging flow cytometry.
Journal of Cellular Biochemistry,
124(11), 1685-1694.
https://doi.org/10.1002/jcb.30476
Ferguson, S., Abel, N. B., Reid, D., Madsen, L. H., Luu, T. B., Andersen, K. R., Stougaard, J. & Radutoiu, S. (2023).
A simple and efficient protocol for generating transgenic hairy roots using Agrobacterium rhizogenes.
PLOS ONE,
18(11), Artikel e0291680.
https://doi.org/10.1371/journal.pone.0291680
Polák, P., Garland, W., Rathore, O., Schmid, M., Salerno-Kochan, A., Jakobsen, L.
, Gockert, M., Gerlach, P.
, Silla, T., Andersen, J. S., Conti, E.
& Jensen, T. H. (2023).
Dual agonistic and antagonistic roles of ZC3H18 provide for co-activation of distinct nuclear RNA decay pathways.
Cell Reports,
42(11), Artikel 113325.
https://doi.org/10.1016/j.celrep.2023.113325
Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Thodberg, K., Petersen, D. L. S.
& Herskin, M. S. (2023).
Effects of journey duration and temperature during pre-slaughter transport on behaviour of cull sows in lairage.
Research in Veterinary Science,
164, Artikel 105016.
https://doi.org/10.1016/j.rvsc.2023.105016
Cai, Z., Wu, X., Thomsen, B., Lund, M. S. & Sahana, G. (2023).
Genome-wide association study identifies functional genomic variants associated with young stock survival in Nordic Red Dairy Cattle.
Journal of Dairy Science,
106(11), 7832-7845.
https://doi.org/10.3168/jds.2023-23252
Beaumont, R. N., Flatley, C., Vaudel, M., Wu, X., Chen, J., Moen, G. H., Skotte, L., Helgeland, Ø., Solé-Navais, P., Banasik, K.
, Albiñana, C., Ronkainen, J., Fadista, J., Stinson, S. E., Trajanoska, K., Wang, C. A., Westergaard, D., Srinivasan, S., Sánchez-Soriano, C. ... Njølstad, P. R. (2023).
Genome-wide association study of placental weight identifies distinct and shared genetic influences between placental and fetal growth.
Nature Genetics,
55(11), 1807-1819.
https://doi.org/10.1038/s41588-023-01520-w
Thomasen, P. B., Salasova, A., Kjaer-Sorensen, K., Woloszczuková, L., Lavický, J.
, Login, H., Tranberg-Jensen, J., Almeida, S., Beel, S., Kavková, M.
, Qvist, P., Kjolby, M., Ovesen, P. L., Nolte, S., Vestergaard, B., Udrea, A.-C., Nejsum, L. N., Chao, M. V., Van Damme, P.
... Nykjaer, A. (2023).
SorCS2 binds progranulin to regulate motor neuron development.
Cell Reports,
42(11), Artikel 113333.
https://doi.org/10.1016/j.celrep.2023.113333
Bærentsen, R. L., Nielsen, S. V.
, Skjerning, R. B., Lyngsø, J., Bisiak, F., Pedersen, J. S., Gerdes, K., Sørensen, M. A.
& Brodersen, D. E. (2023).
Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin-antitoxin system.
eLife,
12, Artikel RP90400.
https://doi.org/10.7554/eLife.90400
Ung, K. L., Schulz, L., Stokes, D. L., Hammes, U. Z.
& Pedersen, B. P. (2023).
Substrate recognition and transport mechanism of the PIN-FORMED auxin exporters.
Trends in Biochemical Sciences,
48(11), 937-948.
https://doi.org/10.1016/j.tibs.2023.07.006
Juul-Kristensen, T., Keller, J. G., Borg, K. N., Hansen, N. Y., Foldager, A., Ladegaard, R., Ho, Y. P.
, Loeschcke, V. & Knudsen, B. R. (2023).
Topoisomerase 1 Activity Is Reduced in Response to Thermal Stress in Fruit Flies and in Human HeLa Cells.
Biosensors,
13(11), Artikel 950.
https://doi.org/10.3390/bios13110950
Chalmers, S. B., Madgwick, S., Lloyd-Lewis, B., McClurg, U. L., Elias, S.
, Andersen, P., Madsen, R., Ananthanarayanan, V.
& Davis, F. M. (2023).
Towards inclusive and sustainable scientific meetings.
Nature Cell Biology,
25(11), 1557-1560.
https://doi.org/10.1038/s41556-023-01222-9
Chen, Y., Atashi, H., Mota, R. R., Grelet, C., Vanderick, S., Hu, H., GplusE Consortium & Gengler, N. (2023).
Validating genomic prediction for nitrogen efficiency index and its composition traits of Holstein cows in early lactation.
Journal of Animal Breeding and Genetics (Online),
140(6), 695-706.
https://doi.org/10.1111/jbg.12819
Ali, S. A., Chung, K. H. K., Forgham, H., Olsen, W. P., Kakinen, A., Balaji, A.
, Otzen, D. E., Davis, T. P. & Javed, I. (2023).
Alzheimer's Progenitor Amyloid-β Targets and Dissolves Microbial Amyloids and Impairs Biofilm Function.
Advanced Science,
10(29), Artikel e2301423.
https://doi.org/10.1002/advs.202301423
Yuan, C., Tang, L., Lopdell, T., Petrov, V. A., Oget-Ebrad, C., Moreira, G. C. M., Duarte, J. L. G., Sartelet, A., Cheng, Z., Salavati, M., Wathes, D. C., Crowe, M. A., GplusE Consortium, Coppieters, W., Littlejohn, M., Charlier, C., Druet, T., Georges, M. & Takeda, H. (2023).
An organism-wide ATAC-seq peak catalog for the bovine and its use to identify regulatory variants.
Genome Research,
33(10), 1848-1864.
https://doi.org/10.1101/gr.277947.123
Montiel, J., García-Soto, I., James, E. K.
, Reid, D., Cárdenas, L., Napsucialy-Mendivil, S.
, Ferguson, S., Dubrovsky, J. G.
& Stougaard, J. (2023).
Aromatic amino acid biosynthesis impacts root hair development and symbiotic associations in Lotus japonicus.
Plant Physiology,
193(2), 1508-1526.
https://doi.org/10.1093/plphys/kiad398
Fedosov, S., Nexø, E., Würtz Heegaard, C., Goldin , J. & Manson, J. B. (2023).
Protein binding assays for an accurate differentiation of vitamin B12 from its inactive analogue. A study on edible cricket powder.
Food Chemistry: X,
19, Artikel 100824.
https://doi.org/10.1016/j.fochx.2023.100824
Ghorbani, S., Christine Füchtbauer, A., Møllebjerg, A., Møller Martensen, P., Hvidbjerg Laursen, S., Christian Evar Kraft, D., Kjems, J., Meyer, R. L., Rahimi, K., Foss, M., Füchtbauer, E. M. & Sutherland, D. S. (2023).
Protein ligand and nanotopography separately drive the phenotype of mouse embryonic stem cells.
Biomaterials,
301, Artikel 122244.
https://doi.org/10.1016/j.biomaterials.2023.122244
Konrad, C. V., Iversen, E. F., Gunst, J. D., Monrad, I., Holleufer, A., Hartmann, R., Østergaard, L. J., Søgaard, O. S., Schleimann, M. H. & Tolstrup, M. (2023).
Redirector of Vaccine-induced Effector Responses (RoVER) for specific killing of cellular targets.
EBioMedicine,
96, Artikel 104785.
https://doi.org/10.1016/j.ebiom.2023.104785
García-Rodríguez, J. L., Korsgaard, U.
, Ahmadov, U., Jarlstad Olesen, M. T., Dietrich, K.-G., Hansen, E. B., Vissing, S. M., Ulhøi, B. P., Dyrskjøt, L., Sørensen, K. D., Kjems, J., Hager, H. & Kristensen, L. S. (2023).
Spatial profiling of circular RNAs in cancer reveals high expression in muscle and stromal cells.
Cancer Research,
83(20), 3340–3353.
https://doi.org/10.1158/0008-5472.CAN-23-0748
Szczęśniak, K., Veillard, F.
, Scavenius, C., Chudzik, K., Ferenc, K., Bochtler, M., Potempa, J. & Mizgalska, D. (2023).
The Bacteroidetes Q-rule and glutaminyl cyclase activity increase the stability of extracytoplasmic proteins.
mBio,
14(5).
https://doi.org/10.1128/mbio.00980-23
Kofod Petersen, A., Forgie, A. H.
, Bindslev, D. A., Villesen, P. & Staun Larsen, L. (2023).
Automatic tissue removal from 3D dental photoscans. Abstract fra Trienial I.O.F.O.S. Congres of Forensic Odonto-Stomatology, Dubrovnik, Kroatien.
https://iofos2023.com/assets/files/IOFOS_abstracts.pdf
Rasmussen, A. M., Okholm, T. L. H.
, Knudsen, M., Vang, S., Dyrskjøt, L., Hansen, T. B. & Pedersen, J. S. (2023).
Circular stable intronic RNAs possess distinct biological features and are deregulated in bladder cancer.
NAR cancer,
5(3), Artikel zcad041.
https://doi.org/10.1093/narcan/zcad041
Zhang, Y., Plesner, T. J., Ouyang, Y., Zheng, Y.-C., Bouhier, E., Ingemann Berentzen, E., Zhang, M., Zhou, P., Zimmermann , W.
, Andersen, G. R. & Guo, Z. (2023).
Computer-aided discovery of a novel thermophilic laccase for low-density polyethylene degradation.
Journal of Hazardous Materials,
458, Artikel 131986.
https://doi.org/10.1016/j.jhazmat.2023.131986
Zhang, C., Reid, K., Sands, A. F., Fraimout, A.
, Schierup, M. H. & Merilä, J. (2023).
De Novo Mutation Rates in Sticklebacks.
Molecular Biology and Evolution,
40(9), Artikel msad192.
https://doi.org/10.1093/molbev/msad192
Roeters, S. J., Strunge, K., Pedersen, K. B., Golbek, T. W., Bregnhøj, M., Zhang, Y., Wang, Y., Dong, M., Nielsen, J., Otzen, D. E., Schiøtt, B. & Weidner, T. (2023).
Elevated concentrations cause upright alpha-synuclein conformation at lipid interfaces.
Nature Communications,
14(1), Artikel 5731.
https://doi.org/10.1038/s41467-023-39843-1
Rusbjerg-Weberskov, C. E., Johansen, M. L., Nowak, J. S., Otzen, D., Pedersen, J. S., Enghild, J. J. & Nielsen, N. S. (2023).
Periostin C-Terminal Is Intrinsically Disordered and Interacts with 143 Proteins in an In Vitro Epidermal Model of Atopic Dermatitis.
Biochemistry,
62(19), 2803-2815.
https://doi.org/10.1021/acs.biochem.3c00176
Faress, I., Khalil, V., Yamamoto, H., Sajgo, S.
, Yonehara, K. & Nabavi, S. (2023).
Recombinase-independent AAV for anterograde transsynaptic tracing.
Molecular Brain,
16(1), Artikel 66.
https://doi.org/10.1186/s13041-023-01053-7
Chatwin, H., Holde, K., Yilmaz, Z., Larsen, J. T., Albiñana, C., Vilhjálmsson, B. J., Mortensen, P. B., Thornton, L. M., Bulik, C. M.
& Petersen, L. V. (2023).
Risk factors for anorexia nervosa: A population-based investigation of sex differences in polygenic risk and early life exposures.
International Journal of Eating Disorders,
56(9), 1703-1716.
https://doi.org/10.1002/eat.23997
Govande, A. A., Babnis, A. W., Urban, C., Habjan, M.
, Hartmann, R., Kranzusch, P. J. & Pichlmair, A. (2023).
RNase L-activating 2'-5' oligoadenylates bind ABCF1, ABCF3 and Decr-1.
The Journal of general virology,
104(9), Artikel 104:001890.
https://doi.org/10.1099/jgv.0.001890
Rasmussen, H. Ø., Nielsen, J., de Poli, A., Otzen, D. E. & Pedersen, J. S. (2023).
Tau Fibrillation Induced by Heparin or a Lysophospholipid Show Different Initial Oligomer Formation.
Journal of Molecular Biology,
435(17), Artikel 168194.
https://doi.org/10.1016/j.jmb.2023.168194