The MBG Protein Design and In Silico Interaction core facility supports researchers in protein design and computational modeling of protein interactions through hands-on guidance and assistance. We provide access to tools such as RFdiffusion, Bindcraft, ProteinMPNN, AlphaFold 3 etc, along with specialized workflows like AlphaPulldown.

Our focus is on helping users develop their own skills and workflows for projects ranging from pilot to small-scale levels, including:

• Guidance for researchers new to protein design
• Support in building and customizing pipelines across different software platforms
• Assistance with script development and workflow optimization to improve efficiency
• Help with visualizing scientific topics, including creating journal covers or posters

The facility is open for Aarhus University scientists as well as local companies to a limited extent on a fee-for-service basis.

The facility runs on hardware from the EMCC cluster.

If you would like to discuss potential projects, please contact Rune Kidmose (rtk@mbg.au.dk)