Berntsson, E., Vosough, F., Noormägi, A., Padari, K., Asplund, F.
, Gielnik, M., Paul, S., Jarvet, J., Tõugu, V., Roos, P. M., Kozak, M., Gräslund, A., Barth, A., Pooga, M., Palumaa, P. & Wärmländer, S. K. T. S. (2023).
Characterization of Uranyl (UO22+) Ion Binding to Amyloid Beta (Aβ) Peptides: Effects on Aβ Structure and Aggregation.
ACS Chemical Neuroscience,
14(15), 2618-2633.
https://doi.org/10.1021/acschemneuro.3c00130
Lucotte, E. A., Guðmundsdóttir, V. B.
, Jensen, J. M., Skov, L., Macià, M. C., Almstrup, K.
, Schierup, M. H., Helgason, A. & Stefansson, K. (2023).
Characterizing the evolution and phenotypic impact of ampliconic Y chromosome regions.
Nature Communications,
14(1), Artikel 3990.
https://doi.org/10.1038/s41467-023-39644-6
Tolomeo, D., Traversa, D., Venuto, S.
, Ebbesen, K., Garcia Rodriguez, J. L., Tamma, G., Ranieri, M., Simonetti, G., Ghetti, M., Paganelli, M., Visci, G., Liso, A., Kok, K., Muscarella, L. A., Fabrizio, F. P., Frassanito, M. A., Lamanuzzi, A., Saltarella, I., Solimando, A. G. ... Storlazzi, C. T. (2023).
circPVT1 and PVT1/AKT3 show a role in cell proliferation, apoptosis, and tumor subtype-definition in Small Cell Lung Cancer.
Genes, Chromosomes & Cancer,
62(7), 377-391.
https://doi.org/10.1002/gcc.23121
Rasmussen, A. M., Okholm, T. L. H.
, Knudsen, M., Vang, S., Dyrskjøt, L., Hansen, T. B. & Pedersen, J. S. (2023).
Circular stable intronic RNAs possess distinct biological features and are deregulated in bladder cancer.
NAR cancer,
5(3), Artikel zcad041.
https://doi.org/10.1093/narcan/zcad041
Martin, M., Nilsson, S. C., Eikrem, D., Fromell, K.
, Scavenius, C., Vogt, L. M., Bielecka, E., Potempa, J.
, Enghild, J. J., Nilsson, B., Ekdahl, K. N., Kapetanovic, M. C. & Blom, A. M. (2023).
Citrullination of C1-inhibitor as a mechanism of impaired complement regulation in rheumatoid arthritis.
Frontiers in Immunology,
14, Artikel 1203506.
https://doi.org/10.3389/fimmu.2023.1203506
Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L. ... Wu, D. D. (2023).
Comparative genomics reveals the hybrid origin of a macaque group.
Science Advances,
9(22), Artikel eadd3580.
https://doi.org/10.1126/sciadv.add3580
Busato, S., Gordon, M., Chaudhari, M.
, Thorsgaard Jensen, I., Akyol, T. Y., Andersen, S. U. & Williams, C. (2023).
Compositionality, sparsity, spurious heterogeneity, and other data-driven challenges for machine learning algorithms within plant microbiome studies.
Current Opinion in Plant Biology,
71, Artikel 102326.
https://doi.org/10.1016/j.pbi.2022.102326
Zhang, Y., Plesner, T. J., Ouyang, Y., Zheng, Y.-C., Bouhier, E., Ingemann Berentzen, E., Zhang, M., Zhou, P., Zimmermann , W.
, Andersen, G. R. & Guo, Z. (2023).
Computer-aided discovery of a novel thermophilic laccase for low-density polyethylene degradation.
Journal of Hazardous Materials,
458, Artikel 131986.
https://doi.org/10.1016/j.jhazmat.2023.131986
Jensen, R. K., Pihl, R., Gadeberg, T. A. F., Jensen, J. K., Andersen, K. R., Thiel, S., Laursen, N. S. & Andersen, G. R. (2023).
Correction: A potent complement factor C3-specific nanobody inhibiting multiple functions in the alternative pathway of human and murine complement (Journal of Biological Chemistry (2018) 293(17) (6269–6281), (S0021925820397313), (10.1074/jbc.RA117.001179)).
The Journal of Biological Chemistry,
299(2), Artikel 102951.
https://doi.org/10.1016/j.jbc.2023.102951
Dehdar, K., Mooziri, M., Samii Moghaddam, A., Salimi, M.
, Nazari, M., Dehghan, S., Jamaati, H., Salimi, A. & Raoufy, M. R. (2023).
Corticosteroid treatment attenuates anxiety and mPFC-amygdala circuit dysfunction in allergic asthma.
Life Sciences,
315, Artikel 121373.
https://doi.org/10.1016/j.lfs.2023.121373
Lázaro-Gorines, R., Pérez, P., Heras-Murillo, I., Adán-Barrientos, I., Albericio, G., Astorgano, D., Flores, S., Luczkowiak, J., Labiod, N.
, Harwood, S. L., Segura-Tudela, A., Rubio-Pérez, L., Nugraha, Y., Shang, X., Li, Y., Alfonso, C., Adipietro, K. A., Abeyawardhane, D. L., Navarro, R. ... Álvarez-Vallina, L. (2023).
Dendritic Cell-Mediated Cross-Priming by a Bispecific Neutralizing Antibody Boosts Cytotoxic T Cell Responses and Protects Mice against SARS-CoV-2.
Advanced Science,
10(34), Artikel 2304818.
https://doi.org/10.1002/advs.202304818
Zhang, C., Reid, K., Sands, A. F., Fraimout, A.
, Schierup, M. H. & Merilä, J. (2023).
De Novo Mutation Rates in Sticklebacks.
Molecular Biology and Evolution,
40(9), Artikel msad192.
https://doi.org/10.1093/molbev/msad192
Als, T. D., Kurki, M. I.
, Grove, J., Voloudakis, G., Therrien, K., Tasanko, E.
, Nielsen, T. T., Naamanka, J., Veerapen, K., Levey, D. F., Bendl, J., Bybjerg-Grauholm, J., Zeng, B.
, Demontis, D., Rosengren, A., Athanasiadis, G., Bækved-Hansen, M.
, Qvist, P., Bragi Walters, G.
... Børglum, A. D. (2023).
Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses.
Nature Medicine,
29(7), 1832-1844.
https://doi.org/10.1038/s41591-023-02352-1
Olesen, H. G., Michailidou, I., Zelek, W. M., Vreijling, J., Ruizendaal, P., de Klein, F., Marquart, J. A., Kuipers, T. B., Mei, H., Zhang, Y., Ahasan, M., Johnson, K. K., Wang, Y., Morgan, B. P., van Dijk, M., Fluiter, K.
, Andersen, G. R. & Baas, F. (2023).
Development, Characterization, and in vivo Validation of a Humanized C6 Monoclonal Antibody that Inhibits the Membrane Attack Complex.
Journal of Innate Immunity,
15(1), 16-36.
https://doi.org/10.1159/000524587
Skakkebæk, A., Kjær-Sørensen, K., Matchkov, V. V., Christensen, L. L., Just, J., Cömert, C., Andersen, N. H.
, Oxvig, C. & Gravholt, C. H. (2023).
Dosage of the pseudoautosomal gene SLC25A6 is implicated in QTc interval duration.
Scientific Reports,
13(1), Artikel 12089.
https://doi.org/10.1038/s41598-023-38867-3
Christensen, M. H., Drue, S. O., Rasmussen, M. H., Frydendahl, A., Lyskjær, I., Demuth, C., Nors, J., Gotschalck, K. A., Iversen, L. H., Andersen, C. L. & Pedersen, J. S. (2023).
Dreams: deep read-level error model for sequencing data applied to low-frequency variant calling and circulating tumor DNA detection.
Genome Biology,
24(1), 99. Artikel 99.
https://doi.org/10.1186/s13059-023-02920-1
Somavarapu, A. K., Kleijwegt, G.
, Nagaraj, M., Alam, P., Nielsen, J. & Otzen, D. E. (2023).
Drug repurposing screens identify compounds that inhibit α-synuclein oligomers' membrane disruption and block antibody interactions.
Chemical Science,
14(11), 3030-3047.
https://doi.org/10.1039/d2sc05534a
Polák, P., Garland, W., Rathore, O., Schmid, M., Salerno-Kochan, A., Jakobsen, L.
, Gockert, M., Gerlach, P.
, Silla, T., Andersen, J. S., Conti, E.
& Jensen, T. H. (2023).
Dual agonistic and antagonistic roles of ZC3H18 provide for co-activation of distinct nuclear RNA decay pathways.
Cell Reports,
42(11), Artikel 113325.
https://doi.org/10.1016/j.celrep.2023.113325
Jensen, M. B., Franchi, G. A., Larsen, M., Foldager, L. & Herskin, M. S. (2023).
Effects of feed energy density, daily milking frequency, and a single injection of cabergoline on behavior and welfare in dairy cows at dry-off.
Journal of Dairy Science,
106(12), 9136-9149.
https://doi.org/10.3168/jds.2022-22835
Hernández-Castellano, L. E., Sørensen, M. T., Foldager, L., Herskin, M. S., Gross, J. J., Bruckmaier, R. M.
& Larsen, M. (2023).
Effects of feeding level, milking frequency, and single injection of cabergoline on blood metabolites, hormones, and minerals around dry-off in dairy cows.
Journal of Dairy Science,
106(4), 2919-2932.
https://doi.org/10.3168/jds.2022-22648
Kobek-Kjeldager, C., Jensen, L. D., Foldager, L., Thodberg, K., Petersen, D. L. S.
& Herskin, M. S. (2023).
Effects of journey duration and temperature during pre-slaughter transport on behaviour of cull sows in lairage.
Research in Veterinary Science,
164, Artikel 105016.
https://doi.org/10.1016/j.rvsc.2023.105016
Heger, T., Stock, C., Laursen, M. J., Habeck, M., Dieudonné, T. & Nissen, P. (2023).
eGFP as an All-in-One Tag for Purification of Membrane Proteins. I
Methods in Molecular Biology (Bind 2652, s. 171-186). Humana Press.
https://doi.org/10.1007/978-1-0716-3147-8_9
Zhou, Y., Zhan, X., Jin, J., Zhou, L.
, Bergman, J., Li, X.
, Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N. ... Zhang, G. (2023).
Eighty million years of rapid evolution of the primate Y chromosome.
Nature Ecology and Evolution,
7(7), 1114-1130.
https://doi.org/10.1038/s41559-022-01974-x
Roeters, S. J., Strunge, K., Pedersen, K. B., Golbek, T. W., Bregnhøj, M., Zhang, Y., Wang, Y., Dong, M., Nielsen, J., Otzen, D. E., Schiøtt, B. & Weidner, T. (2023).
Elevated concentrations cause upright alpha-synuclein conformation at lipid interfaces.
Nature Communications,
14(1), Artikel 5731.
https://doi.org/10.1038/s41467-023-39843-1
Bohr, F., Bohr, S. S. R., Mishra, N. K.
, González-Foutel, N. S., Pinholt, H. D.
, Wu, S., Nielsen, E. M.
, Zhang, M., Kjaergaard, M., Jensen, K. J. & Hatzakis, N. S. (2023).
Enhanced hexamerization of insulin via assembly pathway rerouting revealed by single particle studies.
Communications Biology,
6(1), Artikel 178.
https://doi.org/10.1038/s42003-022-04386-6
Maimaitili, M., Chen, M., Febbraro, F., Ucuncu, E., Kelly, R., Niclis, J. C., Christiansen, J. R.
, Mermet-Joret, N., Niculescu, D., Lauritsen, J., Iannielli, A.
, Klæstrup, I. H., Jensen, U. B., Qvist, P., Nabavi, S., Broccoli, V.
, Nykjær, A., Romero-Ramos, M. & Denham, M. (2023).
Enhanced production of mesencephalic dopaminergic neurons from lineage-restricted human undifferentiated stem cells.
Nature Communications,
14(1), Artikel 7871.
https://doi.org/10.1038/s41467-023-43471-0
Rasmussen, M. Q., Tindbæk, G., Nielsen, M. M., Merrild, C., Steiniche, T., Pedersen, J. S., Moestrup, S. K., Degn, S. E. & Madsen, M. (2023).
Epigenetic Silencing of LRP2 Is Associated with Dedifferentiation and Poor Survival in Multiple Solid Tumor Types.
Cancers,
15(6), Artikel 1830.
https://doi.org/10.3390/cancers15061830
Rheinbay, E.
, Nielsen, M. M., Abascal, F., Wala, J. A., Shapira, O., Tiao, G.
, Hornshøj, H., Hess, J. M.
, Juul, R. I., Lin, Z., Feuerbach, L., Sabarinathan, R.
, Madsen, T., Kim, J., Mularoni, L., Shuai, S., Lanzós, A., Herrmann, C., Maruvka, Y. E. ... PCAWG Drivers and Functional Interpretation Working Group (2023).
Erratum: Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes (Nature (2020) 578 7793 (102-111)).
Nature,
614(7948), E40.
https://doi.org/10.1038/s41586-022-05599-9
Bergeron, L. A.
, Besenbacher, S., Zheng, J., Li, P.
, Bertelsen, M. F., Quintard, B., Hoffman, J. I., Li, Z., St. Leger, J., Shao, C., Stiller, J.
, Gilbert, M. T. P., Schierup, M. H. & Zhang, G. (2023).
Evolution of the germline mutation rate across vertebrates.
Nature,
615(7951), 285-291.
https://doi.org/10.1038/s41586-023-05752-y
Duszkiewicz, A. J., Rossato, J. I.
, Moreno, A., Takeuchi, T., Yamasaki, M., Genzel, L., Spooner, P., Canals, S. & Morris, R. G. M. (2023).
Execution of new trajectories toward a stable goal without a functional hippocampus.
Hippocampus,
33(6), 769-786.
https://doi.org/10.1002/hipo.23497
Skov, L., Coll Macià, M., Lucotte, E. A., Cavassim, M. I. A., Castellano, D.
, Schierup, M. H. & Munch, K. (2023).
Extraordinary selection on the human X chromosome associated with archaic admixture.
Cell Genomics,
3(3), Artikel 100274.
https://doi.org/10.1016/j.xgen.2023.100274
Rasmussen, H. Ø., Kumar, A., Shin, B., Stylianou, F., Sewell, L., Xu, Y.
, Otzen, D. E., Pedersen, J. S. & Matthews, S. J. (2023).
FapA is an Intrinsically Disordered Chaperone for Pseudomonas Functional Amyloid FapC.
Journal of Molecular Biology,
435(2), Artikel 167878.
https://doi.org/10.1016/j.jmb.2022.167878
Stock, C., Heger, T., Hansen, S. B., Larsen, S. T., Habeck, M., Dieudonné, T. L. A., Driller, R. & Nissen, P. (2023).
Fast-forward on P-type ATPases: recent advances on structure and function.
Biochemical Society Transactions,
51(3), 1347-1360.
https://doi.org/10.1042/BST20221543
Mustamin, Y.
, Akyol, T. Y., Gordon, M., Manggabarani, A. M., Isomura, Y., Kawamura, Y., Bamba, M., Williams, C.
, Andersen, S. U. & Sato, S. (2023).
FER and LecRK show haplotype-dependent cold-responsiveness and mediate freezing tolerance in Lotus japonicus.
Plant Physiology,
191(2), 1138-1152.
https://doi.org/10.1093/plphys/kiac533
Kaadt, E., Hedemann, N., Damgaard, C. K., Müller, H. K. & Elfving, B. (2023).
From microRNA to protein, linking the neurotrophic hypothesis of depression to the Wistar Kyoto rat.
Neuroscience Applied,
2.
https://doi.org/10.1016/j.nsa.2023.101131
Rani, S., Sørensen, M. T., Estellé, J.
, Noel, S. J., Nørskov, N., Krogh, U., Foldager, L. & Højberg, O. (2023).
Gastrointestinal Microbial Ecology of Weaned Piglets Fed Diets with Different Levels of Glyphosate.
Microbiology Spectrum,
11(4), Artikel e0061523.
https://doi.org/10.1128/spectrum.00615-23
Keller, J. G.
, Petersen, K. V., Mizielinski, K.
, Thiesen, C., Bjergbæk, L., Reguera, R. M., Pérez-Pertejo, Y., Balaña-Fouce, R., Trejo, A., Masdeu, C., Alonso, C.
, Knudsen, B. R. & Tesauro, C. (2023).
Gel-Free Tools for Quick and Simple Screening of Anti-Topoisomerase 1 Compounds.
Pharmaceuticals,
16(5), Artikel 657.
https://doi.org/10.3390/ph16050657
Christiansen, M. K., Kjær-Sørensen, K., Clavsen, N. C., Dittmann, S.
, Jensen, M. F., Guldbrandsen, H. Ø., Pedersen, L. N., Sørensen, R. H., Lildballe, D. L., Müller, K., Müller, P., Vogel, K., Rudic, B., Borggrefe, M.
, Oxvig, C., Aalkjær, C., Schulze-Bahr, E.
, Matchkov, V., Bundgaard, H.
& Jensen, H. K. (2023).
Genetic analysis identifies the SLC4A3 anion exchanger as a major gene for short QT syndrome.
Heart Rhythm,
20(8), 1136-1143.
https://doi.org/10.1016/j.hrthm.2023.02.010
Skovbjerg, C. K., Angra, D., Robertson-Shersby-Harvie, T., Kreplak, J., Keeble-Gagnère, G., Kaur, S., Ecke, W., Windhorst, A., Nielsen, L. K., Schiemann, A., Knudsen, J., Gutierrez, N., Tagkouli, V.
, Fechete, L. I., Janss, L., Stougaard, J., Warsame, A., Alves, S., Khazaei, H.
... Andersen, S. U. (2023).
Genetic analysis of global faba bean diversity, agronomic traits and selection signatures.
Theoretical and Applied Genetics,
136(5), Artikel 114.
https://doi.org/10.1007/s00122-023-04360-8
Demontis, D., Walters, G. B., Athanasiadis, G., Walters, R., Therrien, K.
, Nielsen, T. T., Farajzadeh, L., Voloudakis, G., Bendl, J., Zeng, B., Zhang, W.
, Grove, J., Als, T. D., Duan, J., Satterstrom, F. K., Bybjerg-Grauholm, J., Bækved-Hansen, M., Gudmundsson, O. O., Magnusson, S. H. ... ADHD Working Group of the Psychiatric Genomics Consortium (2023).
Genome-wide analyses of ADHD identify 27 risk loci, refine the genetic architecture and implicate several cognitive domains.
Nature Genetics,
55(2), 198-208.
https://doi.org/10.1038/s41588-022-01285-8
Chen, Y., Atashi, H., Grelet, C., Mota, R. R., Vanderick, S., Hu, H., GplusE Consortium & Gengler, N. (2023).
Genome-wide association study and functional annotation analyses for nitrogen efficiency index and its composition traits in dairy cattle.
Journal of Dairy Science,
106(5), 3397-3410.
https://doi.org/10.3168/jds.2022-22351
Cai, Z., Wu, X., Thomsen, B., Lund, M. S. & Sahana, G. (2023).
Genome-wide association study identifies functional genomic variants associated with young stock survival in Nordic Red Dairy Cattle.
Journal of Dairy Science,
106(11), 7832-7845.
https://doi.org/10.3168/jds.2023-23252