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Seneste peer-review'ede publikationer ved MBG

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Peer-review'ede publikationer ved MBG - alle år

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Nakashima, K. K., André, A. A. M. & Spruijt, E. (2021). Enzymatic control over coacervation. Methods in Enzymology, 646, 353-389. https://doi.org/10.1016/bs.mie.2020.06.007

Soraggi, S., Riera Belles, M., Rajpert-De Meyts, E., Schierup, M. H. & Almstrup, K. (2021). Evaluating genetic causes of azoospermia: What can we learn from a complex cellular structure and single-cell transcriptomics of the human testis? Human Genetics, 140(1), 183-201. https://doi.org/10.1007/s00439-020-02116-8

Dyla, M. & Kjaergaard, M. (2021). Intrinsic disorder in protein kinase A anchoring proteins signaling complexes. I V. N. Uversky & V. N. Uversky (red.), Dancing Protein Clouds: Intrinsically Disordered Proteins in the Norm and Pathology, Part C (s. 271-294). Elsevier. https://doi.org/10.1016/bs.pmbts.2021.06.005

Pihl, R., Jensen, R. K., Poulsen, E. C., Jensen, L., Hansen, A. G., Thøgersen, I. B., Dobó, J., Gál, P., Andersen, G. R., Enghild, J. J. & Thiel, S. (2021). ITIH4 acts as a protease inhibitor by a novel inhibitory mechanism. Science Advances, 7(2), Artikel 7381. https://doi.org/10.1126/sciadv.aba7381

Hao, D., Wang, X., Wang, X., Thomsen, B., Yang, Y., Lan, X., Huang, Y. & Chen, H. (2021). MicroRNA bta-miR-365-3p inhibits proliferation but promotes differentiation of primary bovine myoblasts by targeting the activin A receptor type I. Journal of Animal Science and Biotechnology, 12(1), Artikel 16. https://doi.org/10.1186/s40104-020-00528-0

Larsen, K., Bæk, R., Sahin, C., Kjær, L., Christiansen, G., Nielsen, J., Farajzadeh, L. & Otzen, D. E. (2021). Molecular characteristics of porcine alpha-synuclein splicing variants. Biochimie, 180, 121-133. https://doi.org/10.1016/j.biochi.2020.10.019

Kjaergaard, M., Glavina, J. & Chemes, L. B. (2021). Predicting the effect of disordered linkers on effective concentrations and avidity with the “C_eff calculator” app. I M. Merkx (red.), Linkers in Biomacromolecules (s. 145-171). Academic Press. https://doi.org/10.1016/bs.mie.2020.09.012

Pedersen, D. V., Pedersen, M. N., Mazarakis, S. M. M., Wang, Y., Lindorff-Larsen, K., Arleth, L. & Andersen, G. R. (2021). Properdin oligomers adopt rigid extended conformations supporting function. eLife, 10, Artikel e63356. https://doi.org/10.7554/eLife.63356

Munn-Chernoff, M. A., Johnson, E. C., Chou, Y.-L., Coleman, J. R. I., Thornton, L. M., Walters, R. K., Yilmaz, Z., Baker, J. H., Hübel, C., Gordon, S., Medland, S. E., Watson, H. J., Gaspar, H. A., Bryois, J., Hinney, A., Leppä, V. M., Mattheisen, M., Ripke, S., Yao, S. ... Agrawal, A. (2021). Shared genetic risk between eating disorder- and substance-use-related phenotypes: Evidence from genome-wide association studies. Addiction Biology, 26(1), Artikel e12880. https://doi.org/10.1111/adb.12880

Deretic, D., Lorentzen, E. & Fresquez, T. (2021). The ins and outs of the Arf4-based ciliary membrane-targeting complex. Small GTPases, 12(1), 1-12. https://doi.org/10.1080/21541248.2019.1616355

Stagsted, L. V. W., O'Leary, E. T., Ebbesen, K. K. & Hansen, T. B. (2021). The RNA-binding protein SFPQ preserves long-intron splicing and regulates circRNA biogenesis in mammals. eLife, 10, Artikel e63088. https://doi.org/10.7554/eLife.63088

Larsen, K. E., Heide-Jørgensen, M. P. & Majgren, B. F. (2021). (2021) Balaena mysticetus Nei-like DNA glycosylase 1 (NEIL1) mRNA, complete cds. GenBank Accession No. MZ055365. Datasæt

Larsen, K. E. (2021). Balaena mysticetus clone 1 CAMP responsive element binding protein 1 (CREB1) mRNA, partial cds. GenBank Accession No. MW147363. Datasæt

Larsen, K. E. & Heide-Jorgenssen, M. P. (2021). Balaena mysticetus cytoglobin (CYGB) mRNA, complete cds. GenBank Accession No. MW280859. Datasæt

Larsen, K. E., Heide-Jorgenssen, M. P. & Majgren, B. F. (2021). Balaena mysticetus Nei-like DNA glycosylase 1 (NEIL1) mRNA, complete cds. GenBank Accession No. MZ055366. Datasæt

Larsen, K. E., Heide-Jorgenssen, M. P., Majgren, B. F. & Jørgensen, H. (2021). ) Balaena mysticetus Nei-like DNA glycosylase 2 (NEIL2) mRNA, complete cds. GenBank Accession No. MZ055369.. Datasæt

Jacobsen, K., Lund, M. B., Shim, J., Gunnersen, S., Füchtbauer, E.-M., Kjolby, M., Carramolino, L. & Bentzon, J. F. (2021). Diverse cellular architecture of atherosclerotic plaque derives from clonal expansion of a few medial SMCs. JCI Insight, 2(19), Artikel e95890. https://doi.org/10.1172/jci.insight.95890

Hansen, M. S. & Rasmussen, J. T. (2021). Enzymes Associated with Milk Phospholipid Membrane Structures: Milk Fat Globule Membranes and Extracellular Vesicles. I A. L. Kelly & L. Bach Larsen (red.), Agents of Change: Enzymes in Milk and Dairy Products (s. 127-161). Springer. https://doi.org/10.1007/978-3-030-55482-8_6

Bhattacharya, K. & Rattan, S. (2021). Fats and oils for health and longevity. I S. Rattan & G. Kaur (red.), Nutrition, food and diet in ageing and longevity. (s. 53-62). Springer. https://doi.org/10.1007/978-3-030-83017-5_3

Andersen, C. B., Yoshimura, Y., Nielsen, J., Otzen, D. E. & Mulder, F. A. A. (2021). How epigallocatechin gallate binds and assembles oligomeric forms of human alpha-synuclein. The Journal of Biological Chemistry, 296, Artikel 100788. https://doi.org/10.1016/j.jbc.2021.100788

Nisar, H., Pasha, U., Mirza, M. U., Abid, R., Hanif, K., Kadarmideen, H. N. & Sadaf, S. (2021). Impact of IL-17F 7488T/C Functional Polymorphism on Progressive Rheumatoid Arthritis: Novel Insight from the Molecular Dynamic Simulations. Immunological Investigations, 50(4), 416-426. https://doi.org/10.1080/08820139.2020.1775642

Larsen, K. E. (2021). Larsen, K. (2021) Sus scrofa domesticus seven in absentia-like 1 protein (SIAH1) mRNA, complete cds. GenBank Accession No. MW218152.. Datasæt

Larsen, K. E. & Majgren, B. F. (2021). Larsen, K., Flügel, B. (2021) Balaena mysticetus tumor protein P53 (TP53) mRNA, partial cds. GenBank Accession No. MW147364. Datasæt

Larsen, K. E. & Jørgensen, H. (2021). Larsen, K., Jørgensen, H. (2021) Balaena mysticetus antizyme inhibitor 1 (AZIN1) mRNA, partial cds. GenBank Accession No. MW147365. Datasæt

Zak, K. M., Bostock, M. J., Waligorska, I., Thøgersen, I. B., Enghild, J. J., Popowicz, G. M., Grudnik, P., Potempa, J. & Ksiazek, M. (2021). Latency, thermal stability, and identification of an inhibitory compound of mirolysin, a secretory protease of the human periodontopathogen Tannerella forsythia. Journal of Enzyme Inhibition and Medicinal Chemistry, 36(1), 1267-1281. https://doi.org/10.1080/14756366.2021.1937619

Larsen, K. E. & Heide-Jørgensen, M. P. (2021). M.P. (2021) Monodon monoceros cytoglobin mRNA, complete cds. GenBank Accession No. MW280858. Datasæt

Rattan, S. (2021). Nutritional hormetins in ageing and longevity. I S. Rattan & G. Kaur (red.), Nutrition, Food and Diet in Ageing and Longevity (s. 109-122). Springer. https://doi.org/10.1007/978-3-030-83017-5_6

Rattan, S. & Kaur, G. (red.) (2021). Nutrition, Food and Diet in Ageing and Longevity. Springer. Healthy Ageing and Longevity Bind 14 https://doi.org/10.1007/978-3-030-83017-5

Rattan, S. & Kaur, G. (2021). Nutrition, food and diet: recapitulation, conclusions and suggestions. I S. Rattan & G. Kaur (red.), Nutrition, food and diet in ageing and longevity (s. 633-640). Springer. https://doi.org/10.1007/978-3-030-83017-5_30

Kadarmideen, H. N. & Carmelo, V. A. O. (2021). Protocol for Construction of Genome-Wide Epistatic SNP Networks Using WISH-R Package. I Methods in Molecular Biology (s. 155-168). Humana Press. https://doi.org/10.1007/978-1-0716-0947-7_10

Zarantonello, A., Mortensen, S., Laursen, N. S. & Andersen, G. R. (2021). Purification of Human Complement Component C4 and Sample Preparation for Structural Biology Applications. I Methods in Molecular Biology (Bind 2227, s. 249-264). Humana Press. https://doi.org/10.1007/978-1-0716-1016-9_22

Hao, D., Wang, X., Wang, X., Thomsen, B., Qu, K., Lan, X., Huang, Y., Lei, C., Huang, B. & Chen, H. (2021). Resveratrol stimulates microRNA expression during differentiation of bovine primary myoblasts. Food and Nutrition Research, 65, Artikel 5453. https://doi.org/10.29219/fnr.v65.5453

Larsen, K. E., Steffensen, J. F., Majgren, B. F. & Jørgensen, H. (2021). Somniosus microcephalus Nei-like DNA glycosylase 1 (NEIL1) mRNA, partial cds. GenBank Accession No. MZ055367. Datasæt, NCBI. PubMed. https://www.ncbi.nlm.nih.gov/nuccore/MZ055367

Larsen, K. E., Chana Munoz, A., Panitz, F., Majgren, B. F. & Jørgensen, H. (2021). Squalus acanthias Nei-like DNA glycosylase 1 (NEIL1) mRNA, partial cds. GenBank Accession No. MZ055368.. Datasæt, NCBI. PubMed. https://www.ncbi.nlm.nih.gov/nuccore/2085593662

Bange, G., Brodersen, D. E., Liuzzi, A. & Steinchen, W. (2021). Two P or Not Two P: Understanding Regulation by the Bacterial Second Messengers (p)ppGpp. Annual Review of Microbiology, 75, 383-406. https://doi.org/10.1146/annurev-micro-042621-122343

Harwood, S. L., Nielsen, N. S., Pedersen, H., Kjøge, K., Nielsen, P. K., Andersen, G. R. & Enghild, J. J. (2020). Substituting the Thiol Ester of Human A2M or C3 with a Disulfide Produces Native Proteins with Altered Proteolysis-Induced Conformational Changes. Biochemistry, 59(51), 4799–4809. https://doi.org/10.1021/acs.biochem.0c00803

Buggiotti, L., Cheng, Z., Wathes, D. C., GplusE Consortium & Ingvartsen, K. L. (2020). Mining the unmapped reads in bovine RNA-Seq data reveals the prevalence of bovine herpes virus-6 in European dairy cows and the associated changes in their phenotype and leucocyte transcriptome. Viruses, 12(12), Artikel 1451. https://doi.org/10.3390/v12121451

Harwood, S. L., Nielsen, N. S., Jensen, K. T., Nielsen, P. K., Thøgersen, I. B. & Enghild, J. J. (2020). α₂-macroglobulin-like protein 1 can conjugate and inhibit proteases through their hydroxyl groups, because of an enhanced reactivity of its thiol ester. Journal of Biological Chemistry, 295(49), 16732-16742. https://doi.org/10.1074/jbc.RA120.015694

Yang, A., Shao, T. J., Bofill-De Ros, X., Lian, C., Villanueva, P., Dai, L. & Gu, S. (2020). AGO-bound mature miRNAs are oligouridylated by TUTs and subsequently degraded by DIS3L2. Nature Communications, 11(1), Artikel 2765. https://doi.org/10.1038/s41467-020-16533-w

Just, J., Yan, Y., Farup, J., Sieljacks, P., Sloth, M., Venø, M., Gu, T., de Paoli, F. V., Nyengaard, J. R., Bæk, R., Jørgensen, M. M., Kjems, J., Vissing, K. & Drasbek, K. R. (2020). Blood flow-restricted resistance exercise alters the surface profile, miRNA cargo and functional impact of circulating extracellular vesicles. Scientific Reports, 10(1), Artikel 5835. https://doi.org/10.1038/s41598-020-62456-3

Carlevaro-Fita, J., Lanzós, A., Feuerbach, L., Hong, C., Mas-Ponte, D., Pedersen, J. S., PCAWG Drivers and Functional Interpretation Group, Johnson, R. & PCAWG Consortium (2020). Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis. Communications Biology, 3(1), Artikel 56. https://doi.org/10.1038/s42003-019-0741-7

Yang, C., Aslan, H., Zhang, P., Zhu, S., Xiao, Y., Chen, L., Khan, N., Boesen, T., Wang, Y., Liu, Y., Wang, L., Sun, Y., Feng, Y., Besenbacher, F., Zhao, F. & Yu, M. (2020). Carbon dots-fed Shewanella oneidensis MR-1 for bioelectricity enhancement. Nature Communications, 11(1), Artikel 1379. https://doi.org/10.1038/s41467-020-14866-0

van der Weijden, V. A. & Ulbrich, S. E. (2020). Embryonic diapause in roe deer: A model to unravel embryo-maternal communication during pre-implantation development in wildlife and livestock species. Theriogenology, 158, 105–111. https://doi.org/10.1016/j.theriogenology.2020.06.042

Zhang, Y., Chen, F., Fonseca, N. A., He, Y., Fujita, M., Nakagawa, H., Zhang, Z., Brazma, A., PCAWG Transcriptome Working Group, PCAWG Structural Variation Working Group, Creighton, C. J. & PCAWG Consortium (2020). High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations. Nature Communications, 11(1), Artikel 736. https://doi.org/10.1038/s41467-019-13885-w

PCAWG Evolution and Heterogeneity Working Group & PCAWG Consortium (2020). Inferring structural variant cancer cell fraction. Nature Communications, 11(1), Artikel 730. https://doi.org/10.1038/s41467-020-14351-8

Privé, F., Arbel, J. & Vilhjálmsson, B. J. (2020). LDpred2: better, faster, stronger. Bioinformatics, 36(22-23), 5424-5431. https://doi.org/10.1093/bioinformatics/btaa1029

Rabaglino, M. B. & Kadarmideen, H. N. (2020). Machine learning approach to integrated endometrial transcriptomic datasets reveals biomarkers predicting uterine receptivity in cattle at seven days after estrous. Scientific Reports, 10(1), Artikel 16981. https://doi.org/10.1038/s41598-020-72988-3

Mohammad-Beigi, H., Hayashi, Y., Zeuthen, C. M., Eskandari, H., Scavenius, C., Juul-Madsen, K., Vorup-Jensen, T., Enghild, J. J. & Sutherland, D. S. (2020). Mapping and identification of soft corona proteins at nanoparticles and their impact on cellular association. Nature Communications, 11(1), Artikel 4535. https://doi.org/10.1038/s41467-020-18237-7

Carmelo, V. A. O., Banerjee, P., da Silva Diniz, W. J. & Kadarmideen, H. N. (2020). Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs. Scientific Reports, 10(1), Artikel 255. https://doi.org/10.1038/s41598-019-57182-4

Fulgenzi, G., Hong, Z., Tomassoni-Ardori, F., Barella, L. F., Becker, J., Barrick, C., Swing, D., Yanpallewar, S., Croix, B. S., Wess, J., Gavrilova, O. & Tessarollo, L. (2020). Novel metabolic role for BDNF in pancreatic β-cell insulin secretion. Nature Communications, 11(1), 1950. Artikel 1950. https://doi.org/10.1038/s41467-020-15833-5

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Helene Eriksen