Pedersen, L. R. L., Nielsen, S. B., Hansted, J. G., Petersen, T. E., Otzen, D. E. & Sørensen, E. S. (2012).
PP3 forms stable tetrameric structures through hydrophobic interactions via the C-terminal amphipathic helix and undergoes reversible thermal dissociation and denaturation.
FEBS journal,
279(2), 336-47.
https://doi.org/10.1111/j.1742-4658.2011.08428.x
Pedersen, M. B., Zhou, X., Larsen, E. K. U., Sørensen, U. S., Kjems, J., Nygaard, J. V., Nyengaard, J. R., Meyer, R. L., Boesen, T. & Vorup-Jensen, T. (2010).
Curvature of Synthetic and Natural Surfaces is an Important Target Feature in Classical Pathway Complement Activation.
Journal of Immunology,
184(4), 1931-1945.
https://doi.org/10.4049/jimmunol.0902214
Pedersen, J. S., Bejerano, G., Siepel, A., Rosenbloom, K., Lindblad-Toh, K., Lander, E. S., Kent, J., Miller, W. & Haussler, D. (2006).
Identification and classification of conserved RNA secondary structures in the human genome.
P L o S Computational Biology (Online),
2(4), e33.
https://doi.org/10.1371/journal.pcbi.0020033
Pedersen, J. S., Meyer, I. M.
, Forsberg, R., Simmonds, P.
& Hein, J. (2004).
A comparative method for finding and folding RNA secondary structures within protein-coding regions.
Nucleic Acids Research,
32(16), 4925-36.
https://doi.org/10.1093/nar/gkh839
Pedersen, L., Johann, S. V., van Zeijl, M.
, Pedersen, F. S. & O'Hara, B. (1995).
Chimeras of receptors for gibbon ape leukemia virus/feline leukemia virus B and amphotropic murine leukemia virus reveal different modes of receptor recognition by retrovirus.
Journal of Virology,
69(4), 2401-2405.
http://jvi.asm.org/content/69/4/2401.abstract?sid=d8892004-18ab-4ee9-8290-21c38d649704
Pedersen, L., Behnisch, W., Schmidt, J., Luz, A.
, Pedersen, F. S., Erfle, V. & Strauss, P. G. (1992).
Molecular cloning of osteoma-inducing replication-competent murine leukemia viruses from the RFB osteoma virus stock.
Journal of Virology,
66(10), 6186-6190.
http://jvi.asm.org/content/66/10/6186.abstract
Pedersen, M. Ø., Mikkelsen, K., Behrens, M. A., Pedersen, J. S., Enghild, J. J., Skrydstrup, T., Malmendal, A. & Nielsen, N. C. (2010).
NMR reveals two-step association of Congo Red to amyloid β in low-molecular-weight aggregates.
Journal of Physical Chemistry Part B: Condensed Matter, Materials, Surfaces, Interfaces & Biophysical,
114(48), 16003-16010.
https://doi.org/10.1021/jp108035y
Pedersen, L. R. L., Hansted, J. G., Nielsen, S. B., Petersen, T. E., Sørensen, U. S., Otzen, D. & Sørensen, E. S. (2012).
Proteolytic activation of proteose peptone component 3 by release of a C-terminal peptide with antibacterial properties.
Journal of Dairy Science,
95(6), 2819-2829.
https://doi.org/10.3168/jds.2011-4837
Pedersen, J. M., Fredsøe, J. C., Rødgaard, M. T., Andreasen, L., Mundbjerg, K., Kruhøffer, M., Brinch, M., Schierup, M. H., Bjergbæk, L. & Andersen, A. H. (2012).
DNA Topoisomerases Maintain Promoters in a State Competent for Transcriptional Activation in Saccharomyces cerevisiae.
P L o S Genetics,
8(12 e1003128), 1-15.
https://doi.org/10.1371/journal.pgen.1003128
Pedersen, S. S., Keller, A. K., Nielsen, M. K.
, Jespersen, B., Falborg, L., Rasmussen, J. T., Heegaard, C. W. & Rehling, M. (2013).
Cell injury after ischemia and reperfusion in the porcine kidney evaluated by radiolabelled microspheres, sestamibi, and lactadherin.
EJNMMI research,
3(62), 1-11.
https://doi.org/10.1186/2191-219X-3-62
Pedersen, J., Ugleholdt, R. K., Jørgensen, S. M., Windeløv, J. A., Grunddal, K. V., Schwartz, T. W.
, Füchtbauer, E.-M., Poulsen, S. S., Holst, P. J. & Holst, J. J. (2013).
Glucose metabolism is altered after loss of L cells and α-cells but not influenced by loss of K cells.
American Journal of Physiology: Endocrinology and Metabolism,
304(1), E60-E73.
https://doi.org/10.1152/ajpendo.00547.2011
Pedersen, B. P., Ifrim, G., Liboriussen, P., Axelsen, K. B., Palmgren, M. G.
, Nissen, P., Wiuf, C. H.
& Pedersen, C. N. S. (2014).
Large Scale Identification and Categorization of Protein Sequences Using Structured Logistic Regression.
P L o S One,
9(1), Artikel e85139.
https://doi.org/10.1371/journal.pone.0085139
Pedersen, J. S., Valen, E., Velazquez, A. M. V., Parker, B. J., Rasmussen, M., Lindgreen, S., Lilje, B., Tobin, D. J., Kelly, T. K.
, Vang, S., Andersson, R., Jones, P. A., Hoover, C. A., Tikhonov, A., Prokhortchouk, E., Rubin, E. M., Sandelin, A. G., Gilbert, M. T. P., Krogh, A. ... Orlando, L. A. A. (2014).
Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome.
Genome Research,
24, 454-466.
https://doi.org/10.1101/gr.163592.113
Pedersen, B. P., Kumar, H., Waight, A. B., Risenmay, A. J., Roe-Zurz, Z., Chau, B. H., Schlessinger, A., Bonomi, M., Harries, W., Sali, A., Johri, A. K. & Stroud, R. M. (2013).
Crystal structure of a eukaryotic phosphate transporter.
Nature,
496(7446), 533-536.
https://doi.org/10.1038/nature12042
Pedersen, H. S., Løvendahl, P., Larsen, K. E., Madsen, L. B. & Callesen, H. (2014).
mtDNA copy number in oocytes of different sizes from individual pre- and post-pubertal pigs.
Reproduction, Fertility and Development,
27(1), 181-182. Artikel (abst 181).
https://doi.org/10.1071/RDv27n1Ab181
Pedersen, H. S., Løvendahl, P., Larsen, K. E., Madsen, L. B. & Callesen, H. (2016).
Porcine oocyte mtDNA copy number is high or low depending on the donor.
Zygote,
24(4), 617-623.
https://doi.org/10.1017/S0967199415000611
Pedersen, B. P., Gourdon, P., Liu, X., Karlsen, J. L. & Nissen, P. (2016).
Initiating heavy-atom-based phasing by multi-dimensional molecular replacement.
Acta crystallographica Section D: Structural biology ,
72(Pt 3), 440-445.
https://doi.org/10.1107/S2059798315022482
Pedersen, D. V., Roumenina, L. T.
, Jensen, R. K., Gadeberg, T. A., Marinozzi, C., Picard, C., Rybkine, T.
, Thiel, S., Sørensen, U. B., Stover, C., Fremeaux-Bacchi, V.
& Andersen, G. R. (2017).
Functional and structural insight into properdin control of complement alternative pathway amplification.
E M B O Journal,
36(8), 1084-1099.
https://doi.org/10.15252/embj.201696173
Pedersen, C. B., Bybjerg-Grauholm, J.
, Pedersen, M. G., Grove, J., Agerbo, E., Bækvad-Hansen, M., Poulsen, J. B., Hansen, C. S.
, McGrath, J. J., Als, T. D., Goldstein, J. I., Neale, B. M., Daly, M. J., Hougaard, D. M.
, Mors, O., Nordentoft, M.
, Børglum, A. D., Werge, T.
& Mortensen, P. B. (2018).
The iPSYCH2012 case-cohort sample: new directions for unravelling genetic and environmental architectures of severe mental disorders.
Molecular Psychiatry,
23(1), 6–14.
https://doi.org/10.1038/mp.2017.196
Pedersen, C. T., Loke, I., Lorentzen, A.
, Wolf, S., Kamble, M., Kristensen, S. K., Munch, D., Radutoiu, S., Spillner, E., Roepstorff, P., Thaysen-Andersen, M.
, Stougaard, J. & Dam, S. (2017).
N-glycan maturation mutants in Lotus japonicus for basic and applied glycoprotein research.
Plant Journal,
91(3), 394-407.
https://doi.org/10.1111/tpj.13570
Pedersen, H. S., Liu, Y., Foldager, L., Callesen, H., Larsen, K. E. & Sørensen, M. T. (2019).
Calibration of sperm concentration for in vitro fertilization in a mouse reprotoxicity model.
Toxicology in Vitro,
55, 58-61.
https://doi.org/10.1016/j.tiv.2018.11.009
Pedersen, D. V., Roumenina, L.
, Jensen, R. K., Gadeberg, T. A. F., Marinozzi, C., Picard, C., Rybkine, T.
, Thiele, S., Sorensen, U. B. S., Stover, C., Fremeaux-Bacchi, V.
& Andersen, G. R. (2017).
Structural and functional studies of human complement factor P.
Molecular Immunology,
89(Special issue: EMCHD2017), 197-198.
https://doi.org/10.1016/j.molimm.2017.06.206
Pedersen, J. N., Jiang, Z.
, Christiansen, G., Lee, J. C.
, Pedersen, J. S. & Otzen, D. E. (2019).
Lysophospholipids induce fibrillation of the repeat domain of Pmel17 through intermediate core-shell structures.
Biochimica et Biophysica Acta - Proteins and Proteomics,
1867(5), 519-528.
https://doi.org/10.1016/j.bbapap.2018.11.007
Pedersen, D. V., Gadeberg, T. A. F., Thomas, C., Joram, N.
, Jensen, R. K., Mazarakis, S. M. M., Revel, M., El Sissy, C.
, Petersen, S. V., Lindorff-Larsen, K.
, Thiel, S., Laursen, N. S., Fremeaux-Bacchi, V.
& Andersen, G. R. (2019).
Structural Basis for Properdin Oligomerization and Convertase Stimulation in the Human Complement System.
Frontiers in Immunology,
10, Artikel 2007.
https://doi.org/10.3389/fimmu.2019.02007
Pedersen, J. N., Lyngsø, J., Zinn, T.
, Otzen, D. & Pedersen, J. S. (2020).
A complete picture of protein unfolding and refolding in surfactants.
Chemical Science,
11(3), 699-712.
https://doi.org/10.1039/C9SC04831F
Pedersen, H., Jensen, R. K., Hansen, A. G., Gadeberg, T. A. F., Thiel, S., Laursen, N. S. & Andersen, G. (2020).
A C3 specific nanobody that blocks all three activation pathways in the human and murine complement system.
The Journal of Biological Chemistry,
295(26), 8746-8758.
https://doi.org/10.1074/jbc.RA119.012339
Pedersen, D. V., Rösner, T.
, Hansen, A. G., Andersen, K. R., Thiel, S., Andersen, G. R., Valerius, T.
& Laursen, N. S. (2020).
Recruitment of properdin by bi-specific nanobodies activates the alternative pathway of complement.
Molecular Immunology,
124, 200-210.
https://doi.org/10.1016/j.molimm.2020.06.005
Pedersen, H., Jensen, R. K., Jensen, J. M. B., Fox, R.
, Pedersen, D. V., Olesen, H. G., Hansen, A. G., Christiansen, D.
, Mazarakis, S. M. M., Lojek, N.
, Hansen, P., Gadeberg, T. A. F., Zarantonello, A., Laursen, N. S., Mollnes, T. E., Johnson, M. B., Stevens, B.
, Thiel, S. & Andersen, G. R. (2020).
A Complement C3-Specific Nanobody for Modulation of the Alternative Cascade Identifies the C-Terminal Domain of C3b as Functional in C5 Convertase Activity.
Journal of Immunology,
205(8), 2287-2300.
https://doi.org/10.4049/jimmunol.2000752
Pedersen, D. V., Pedersen, M. N., Mazarakis, S. M. M., Wang, Y., Lindorff-Larsen, K., Arleth, L.
& Andersen, G. R. (2021).
Properdin oligomers adopt rigid extended conformations supporting function.
eLife,
10, Artikel e63356.
https://doi.org/10.7554/eLife.63356
Pedersen, E. M., Agerbo, E., Plana-Ripoll, O., Grove, J., Dreier, J. W., Musliner, K. L., Bækvad-Hansen, M., Athanasiadis, G., Schork, A., Bybjerg-Grauholm, J., Hougaard, D. M., Werge, T., Nordentoft, M.
, Mors, O., Dalsgaard, S., Christensen, J., Børglum, A. D., Mortensen, P. B., McGrath, J. J. ... Vilhjálmsson, B. J. (2022).
Accounting for age of onset and family history improves power in genome-wide association studies.
American Journal of Human Genetics,
109(3), 417-432.
https://doi.org/10.1016/j.ajhg.2022.01.009
Pedersen, H., Jensen, R. K., Hansen, A. G., Petersen, S. V., Thiel, S., Laursen, N. S. & Andersen, G. R. (2022).
Structure-Guided Engineering of a Complement Component C3-Binding Nanobody Improves Specificity and Adds Cofactor Activity.
Frontiers in Immunology,
13, Artikel 872536.
https://doi.org/10.3389/fimmu.2022.872536
Pedersen, M. L., Pedersen, D. V., Winkler, M. B. L., Olesen, H. G., Søgaard, O. S., Østergaard, L., Laursen, N. S., Rahimic, A. H. F. & Tolstrup, M. (2023).
Nanobody-mediated complement activation to kill HIV-infected cells.
EMBO Molecular Medicine,
15(4), Artikel e16422.
https://doi.org/10.15252/emmm.202216422
Pedersen, D. V., Gytz, H., Winkler, M. B. L., Zarantonello, A., Baumann, N.
, Hansen, A. G., Thiel, S., Andersen, G. R., Valerius, T.
& Laursen, N. S. (2023).
Bispecific Complement Engagers for Targeted Complement Activation.
Journal of Immunology,
211(3), 403-413.
https://doi.org/10.4049/jimmunol.2200952
Pečnerová, P., Lord, E.
, Garcia-Erill, G., Hanghøj, K., Rasmussen, M. S., Meisner, J., Liu, X., van der Valk, T., Santander, C. G., Quinn, L., Lin, L., Liu, S., Carøe, C., Dalerum, F., Götherström, A., Måsviken, J., Vartanyan, S., Raundrup, K., Al-Chaer, A. ... Siegismund, H. R. (2024).
Population genomics of the muskox' resilience in the near absence of genetic variation.
Molecular Ecology,
33(2), Artikel e17205.
https://doi.org/10.1111/mec.17205