Yatime, L., Betzer, C., Jensen, R. K., Mortensen, S., Jensen, P. H. & Andersen, G. R. (2016).
The Structure of the RAGE:S100A6 Complex Reveals a Unique Mode of Homodimerization for S100 Proteins.
Structure,
24(12), 2043-2052.
https://doi.org/10.1016/j.str.2016.09.011
Yatime, L., Merle, N. S.
, Hansen, A. G., Friis, N. A., Østergaard, J. A., Bjerre, M., Roumenina, L. T.
, Thiel, S., Kristensen, P. & Andersen, G. R. (2018).
A single-domain antibody targeting complement component c5 acts as a selective inhibitor of the terminal pathway of the complement system and thus functionally mimicks the c-terminal domain of the staphylococcus aureusSSL7 protein.
Frontiers in Immunology,
9, Artikel 2822.
https://doi.org/10.3389/fimmu.2018.02822
Yates, S. P., Taylor, P., Jørgensen, R., Ferraris, D., Zhang, J.
, Andersen, G. R. & Merrill, A. R. (2005).
Structure-function analysis of water soluble inhibitors of the catalytic domain of exotoxin A from Pseudomonas aeruginosa.
Biochemical Journal,
385, 667-675.
Yanpallewar, S., Tomassoni-Ardori, F., Palko, M. E.
, Hong, Z., Kiris, E., Becker, J., Fulgenzi, G. & Tessarollo, L. (2022).
TrkA-cholinergic signaling modulates fear encoding and extinction learning in PTSD-like behavior.
Translational Psychiatry,
12(1), 111. Artikel 111.
https://doi.org/10.1038/s41398-022-01869-2Yano, K., Shibata, S., Chen, W.-L., Sato, S., Kaneko, T.
, Jurkiewicz, A., Sandal, N., Banba, M., Imaizumi-Anraku, H., Kojima, T., Ohtomo, R., Szczyglowski, K.
, Stougaard, J., Tabata, S., Hayashi, M., Kouchi, H. & Umehara, Y. (2009).
CERBERUS, a novel U-box protein containing WD-40 repeats, is required for formation of the infection thread and nodule development in the legume-Rhizobium symbiosis.
Plant Journal,
60(1), 168-180.
https://doi.org/10.1111/j.1365-313X.2009.03943.xYang, B. Z., Ding, J. H.
, Enghild, J. J., Bao, Y. & Chen, Y. T. (1992).
Molecular cloning and nucleotide sequence of cDNA encoding human muscle glycogen debranching enzyme.
Journal of Biological Chemistry,
267(13), 9294-9.
Yang, C., Nilsson, L., Cheema, M. U., Wang, Y., Frøkiær, J., Gao, S., Kjems, J. & Nørregaard, R. (2014).
Chitosan/siRNA Nanoparticles Targeting Cyclooxygenase Type 2 Attenuate Unilateral Ureteral Obstruction-induced Kidney Injury in Mice.
Theranostics,
5(2), 110-123.
https://doi.org/10.7150/thno.9717
Yang, C., Thomsen, R. P., Ogaki, R., Kjems, J. & Mian Teo, B. (2015).
Ultrastable green fluorescence carbon dots with a high quantum yield for bioimaging and use as theranostic carriers.
Journal of Materials Chemistry B,
3(4577), 4577-4584.
https://doi.org/10.1039/C5TB00467E
Yang, C., Ogaki, R., Hansen, L., Kjems, J. & Mian Teo, B. (2015).
Theranostic carbon dots derived from garlic with efficient anti-oxidative effects towards macrophages.
R S C Advances,
118, 97836-97840.
https://doi.org/10.1039/C5RA16874K
Yang, C., Gao, S., Dagnæs-Hansen, F., Jakobsen, M. & Kjems, J. (2017).
Impact of PEG Chain Length on the Physical Properties and Bioactivity of PEGylated Chitosan/siRNA Nanoparticles in Vitro and in Vivo.
A C S Applied Materials and Interfaces,
9(14), 12203-12216.
https://doi.org/10.1021/acsami.6b16556
Yang, C., Vu Quang, H., Husum, D. M. U., Tingskov, S. J. H., Vinding, M. S., Nielsen, T., Song, P., Nielsen, N. C., Nørregaard, R. & Kjems, J. (2017).
Theranostic poly(lactic-co-glycolic acid) nanoparticle for magnetic resonance/infrared fluorescence bimodal imaging and efficient siRNA delivery to macrophages and its evaluation in a kidney injury model.
Nanomedicine: Nanotechnology, Biology and Medicine,
13(8), 2451–2462.
https://doi.org/10.1016/j.nano.2017.08.007
Yang, C., Gao, S., Song, P., Dagnæs-Hansen, F., Jakobsen, M. V. & Kjems, J. (2018).
Theranostic Niosomes for Efficient siRNA/microRNA Delivery and Activatable Near-Infrared Fluorescent Tracking of Stem Cells.
A C S Applied Materials and Interfaces,
10(23), 19494–19503.
https://doi.org/10.1021/acsami.8b05513
Yang, C.
, Aslan, H., Zhang, P., Zhu, S., Xiao, Y., Chen, L.
, Khan, N., Boesen, T., Wang, Y., Liu, Y., Wang, L., Sun, Y., Feng, Y.
, Besenbacher, F., Zhao, F. & Yu, M. (2020).
Carbon dots-fed Shewanella oneidensis MR-1 for bioelectricity enhancement.
Nature Communications,
11(1), Artikel 1379.
https://doi.org/10.1038/s41467-020-14866-0Yang, C., Zhou, Y., Marcus, S., Formenti, G., Bergeron, L. A., Song, Z., Bi, X.
, Bergman, J., Rousselle, M. M. C., Zhou, C., Zhou, L., Deng, Y., Fang, M., Xie, D., Zhu, Y., Tan, S., Mountcastle, J., Haase, B., Balacco, J. ... Zhang, G. (2021).
Evolutionary and biomedical insights from a marmoset diploid genome assembly.
Nature,
594(7862), 227-233.
https://doi.org/10.1038/s41586-021-03535-xYang, D., Cwynar, V. A., Hart, D. J., Madanmohan, J., Lee, J.
, Lyons, J. & Caffrey, M. (2012).
Preparation of 1-monoacylglycerols via the suzuki-miyaura reaction: 2,3-dihydroxypropyl (z )-tetradec-7-enoate.
Organic Syntheses,
89, 183-201.
https://doi.org/10.15227/orgsyn.089.0183Yang, A.
, Bofill-De Ros, X., Stanton, R., Shao, T. J., Villanueva, P. & Gu, S. (2022).
TENT2, TUT4, and TUT7 selectively regulate miRNA sequence and abundance.
Nature Communications,
13(1), Artikel 5260.
https://doi.org/10.1038/s41467-022-32969-8Yang, A.
, Bofill-De Ros, X., Shao, T. J., Jiang, M., Li, K., Villanueva, P., Dai, L. & Gu, S. (2019).
3′ Uridylation Confers miRNAs with Non-canonical Target Repertoires.
Molecular Cell,
75(3), 511-522.e4.
https://doi.org/10.1016/j.molcel.2019.05.014Yang, A., Shao, T. J.
, Bofill-De Ros, X., Lian, C., Villanueva, P., Dai, L. & Gu, S. (2020).
AGO-bound mature miRNAs are oligouridylated by TUTs and subsequently degraded by DIS3L2.
Nature Communications,
11(1), Artikel 2765.
https://doi.org/10.1038/s41467-020-16533-wYan, Y., Wang, X.
, Venø, M. T., Bakholdt, V., Sørensen, J. A., Krogdahl, A., Sun, Z.
, Gao, S. & Kjems, J. (2017).
Circulating miRNAs as biomarkers for oral squamous cell carcinoma recurrence in operated patients.
OncoTarget,
8(5), 8206-8214.
https://doi.org/10.18632/oncotarget.14143
Yan, X., Wang, Z., Westberg-Rasmussen, S., Tarbier, M., Rathjen, T., Tattikota, S. G., Peck, B. C. E., Kanke, M.
, Oxvig, C., Frystyk, J., Starup-Linde, J., Sethupathy, P., Friedländer, M. R.
, Gregersen, S. & Poy, M. N. (2017).
Differential impact of glucose administered intravenously and orally on circulating miR-375 levels in human subjects.
Journal of Clinical Endocrinology and Metabolism,
102(10), 3749-3755.
https://doi.org/10.1210/jc.2017-01365Yan, Y., Chang, C. C., Venø, M. T., Mothershead, C. R., Su, J. & Kjems, J. (2019).
Isolating, Sequencing and Analyzing Extracellular MicroRNAs from Human Mesenchymal Stem Cells.
Journal of visualized experiments : JoVE,
2019(145), Artikel e58655.
https://doi.org/10.3791/58655
Yan, Y., Chang, C., Su, J., Venø, M. T. & Kjems, J. (2020).
Osteoblastogenesis Alters Small RNA Profiles in EVs Derived from Bone Marrow Stem Cells (BMSCs) and Adipose Stem Cells (ASCs).
Biomedicines,
8(10), 1-17. Artikel 387.
https://doi.org/10.3390/biomedicines8100387
Yan, Y., Gu, T., Christensen, S. D. K., Su, J., Lassen, T. R., Hjortbak, M. V., Lo, I., Venø, S. T., Tóth, A. E., Song, P., Nielsen, M. S., Bøtker, H. E., Blagoev, B.
, Drasbek, K. R. & Kjems, J. (2021).
Cyclic hypoxia conditioning alters the content of myoblast-derived extracellular vesicles and enhances their cell-protective functions.
Biomedicines,
9(9), Artikel 1211.
https://doi.org/10.3390/biomedicines9091211
Yan, K., Stanley, M., Raimi, O.
, Ferenbach, A. T., Dorfmueller, H. C.
& van Aalten, D. M. F. (2026).
Cell wall target fragment discovery using a low-cost, minimal fragment library.
FEBS Letters. Advance online publication.
https://doi.org/10.1002/1873-3468.70281Yamamoto, K.
, Scavenius, C., Meschis, M. M., Gremida, A. M. E.
, Mogensen, E. H., Thøgersen, I. B., Bonelli, S., Scilabra, S. D., Jensen, A., Santamaria, S., Ahnström, J., Bou-Gharios, G.
, Enghild, J. J. & Nagase, H. (2022).
A top-down approach to uncover the hidden ligandome of low-density lipoprotein receptor-related protein 1 in cartilage.
Matrix Biology,
112, 190-218.
https://doi.org/10.1016/j.matbio.2022.08.007Yamamoto, K., Scilabra, S. D., Bonelli, S., Jensen, A.
, Scavenius, C., Enghild, J. J. & Strickland, D. K. (2024).
Novel insights into the multifaceted and tissue-specific roles of the endocytic receptor LRP1.
The Journal of Biological Chemistry,
300(8), Artikel 107521.
https://doi.org/10.1016/j.jbc.2024.107521,
https://doi.org/10.1016/j.jbc.2024.107521Yamamoto, S., Nakamura, H.
, Kawamura, Y. K., Kitazawa, T., Kimura, M. & Kitazawa, Y. (2024).
Alkoxy Substituted Brominated closo-Dodecaborates with Functionalized Aliphatic Spacers.
Chemistry,
6(6), 1635-1644.
https://doi.org/10.3390/chemistry6060099Yamamoto, S., Nakajima, R., Hirai, Y.
, Kawamura, Y. K., Makita, Y.
, Kitazawa, T., Kimura, M. & Kitazawa, Y. (2026).
Hydroxylated iodinated boron clusters: a tunable platform for enhanced membrane transport and biocompatibility.
Chemical Communications,
62(3), 879-882.
https://doi.org/10.1039/d5cc04085jXu, S., Dong, M., Liu, X., Howard, K. A., Kjems, J. & Besenbacher, F. (2007).
Direct force measurements between siRNA and chitosan molecules using force spectroscopy.
Biophysical Journal,
93(3), 952-9.
https://doi.org/10.1529/biophysj.106.093229
Xu, W., Wang, J.-G.
, Jacobsen, M. F., Mura, M.
, Yu, M., Kelly, R. E. A., Meng, Q.-Q.
, Lægsgaard, E., Stensgaard, I., Linderoth, T. R., Kjems, J., Kantorovich, L. N.
, Gothelf, K. V. & Besenbacher, F. (2010).
Supramolecular porous network formed by molecular recognition between chemically modified nucleobases guanine and cytosine.
Angewandte Chemie International Edition,
49(49), 9373-7.
https://doi.org/10.1002/anie.201003390
Xu, W., Tan, Q.
, Yu, M., Sun, Q., Kong, H.
, Lægsgaard, E., Stensgaard, I., Kjems, J., Wang, J., Wang, C.
& Besenbacher, F. (2013).
Atomic-scale structures and interactions between the guanine quartet and potassium.
Chemical Communications,
49(65), 7210-7212.
https://doi.org/10.1039/c3cc43302a
Xu, H. H., Liu, S. J., Song, S. H., Wang, W. Q.
, Møller, I. M. & Song, S. Q. (2016).
Proteome changes associated with dormancy release of Dongxiang wild rice seeds.
Journal of Plant Physiology,
206, 68-86.
https://doi.org/10.1016/j.jplph.2016.08.016Xiao, H., Shiu, P. K. T., Gabryleska, M., Conn, S. J., Dey, A., Chakrabarti, K., Regouc, M., Pichler, M.
, Vang Ørom, U. A., Santulli, G., Nishiwada, S., Goel, A., Nagarajan, V., Timmons, L., Alahari, S. K., Laprovitera, N., Ferracin, M., Hu, P. & Jin, H. (2020).
The non-coding rna journal club: Highlights on recent papers-7.
Non-coding RNA,
5(2), Artikel 40.
https://doi.org/10.3390/NCRNA5020040Wurtz, K. E., Thodberg, K., Berenjian, A.
, Foldager, L., Tahamtani, F. M. & Riber, A. B. (2022).
Commercial layer hybrids kept under organic conditions: a comparison of range use, welfare, and egg production in two layer strains.
Poultry Science,
101(9), Artikel 102005.
https://doi.org/10.1016/j.psj.2022.102005
Wurtz, K. E., Tahamtani, F. M.
, Foldager, L., Thodberg, K. & Riber, A. B. (2022).
Association of range use, individual behavior, and welfare indicators of two laying hen hybrids housed under organic conditions. I M. Kjosevski, S. Waiblinger & V. Ilieski (red.),
Proceedings of the 55th Congress of the ISAE: Animal Behaviour and Beyond (s. 56-56).
https://www.applied-ethology.org/res/ISAE_2022_PROCEEDINGS_e-version.pdf
Wurtz, K. E., Tahamtani, F. M., Foldager, L., Thodberg, K. & Riber, A. B. (2023).
Associations of range use with individual behaviour, clinical welfare indicators, fear response and gastrointestinal characteristics of two laying hen hybrids.
Applied Animal Behaviour Science,
265, Artikel 105978.
https://doi.org/10.1016/j.applanim.2023.105978
Wuerges, J., Garau, G., Geremia, S.
, Fedosov, S., Petersen, T. E. & Randaccio, L. (2006).
Structural basis for mammalian vitamin B12 transport by transcobalamin.
Proceedings of the National Academy of Sciences (PNAS),
103, 4386-4391.
Wu, K.
, Song, W., Zhao, L., Liu, M., Yan, J.
, Andersen, M. Ø., Kjems, J., Gao, S. & Zhang, Y. (2013).
MicroRNA functionalized microporous titanium oxide surface by lyophilization with enhanced osteogenic activity.
A C S Applied Materials and Interfaces,
5(7), 2733-44.
https://doi.org/10.1021/am400374cWu, G., Schmid, M., Rib, L.
, Polak, P., Meola, N., Sandelin, A.
& Jensen, T. H. (2020).
A Two-Layered Targeting Mechanism Underlies Nuclear RNA Sorting by the Human Exosome.
Cell Reports,
30(7), 2387-2401.e5.
https://doi.org/10.1016/j.celrep.2020.01.068
Wu, M.
, Karadoulama, E., Lloret-Llinares, M., Rouviere, J. O., Vaagensø, C. S.
, Moravec, M., Li, B., Wang, J.
, Wu, G., Gockert, M., Pelechano, V.
, Jensen, T. H. & Sandelin, A. (2020).
The RNA exosome shapes the expression of key protein-coding genes.
Nucleic Acids Research,
48(15), 8509-8528.
https://doi.org/10.1093/nar/gkaa594Wu, Y., Biswas, D., Usaite, I., Angelova, M., Boeing, S., Karasaki, T., Veeriah, S., Czyzewska-Khan, J., Morton, C., Joseph, M., Hessey, S., Reading, J., Georgiou, A., Al-Bakir, M. & TRACERx Consortium (2022).
A local human Vδ1 T cell population is associated with survival in nonsmall-cell lung cancer.
Nature Cancer,
3(6), 696-709.
https://doi.org/10.1038/s43018-022-00376-zWu, T., Zhong, L.
, Hong, Z., Li, Y., Liu, X., Pan, L., Xin, H. & Zhu, Y. (2015).
The effects of Zanthoxylum bungeanum extract on lipid metabolism induced by sterols.
Journal of Pharmacological Sciences,
127(3), 251-9.
https://doi.org/10.1016/j.jphs.2014.12.002Wray, N. R., Ripke, S.
, Mattheisen, M., Trzaskowski, M., Byrne, E. M., Abdellaoui, A., Adams, M. J.
, Agerbo, E., Air, T. M., Andlauer, T. M. F., Bacanu, S.-A., Bækvad-Hansen, M., Beekman, A. F. T., Bigdeli, T. B., Binder, E. B., Blackwood, D. R. H., Bryois, J.
, Buttenschøn, H. N., Bybjerg-Grauholm, J. ... Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium (2018).
Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression.
Nature Genetics,
50(5), 668-681.
https://doi.org/10.1038/s41588-018-0090-3Wopereis, J., Pajuelo, E., Dazzo, F. B., Jiang, Q., Gresshoff, P. M., de Bruijn, F. J.
, Stougaard, J. & Szczyglowski, K. (2000).
Short root mutant of Lotus japonicus with a dramatically altered symbiotic phenotype.
Plant. J.,
23, 97-114.
Wong, J. E. M. M., Alsarraf, H. M. A. B., Kaspersen, J. D., Pedersen, J. S., Stougaard, J., Thirup, S. S. & Blaise, M. (2014).
Cooperative binding of LysM domains determines the carbohydrate affinity of a bacterial endopeptidase protein.
FEBS journal,
281(4), 1196-1208.
https://doi.org/10.1111/febs.12698
